Science Packages

Science related packages

To install Raspbian software on a Raspberry Pi

Packages are installed using Terminal. First get an updated package list by entering the following command in to terminal if this has not been done today sudo apt-get update
Then install your chosen package with the command sudo apt-get install package name Find out more with the Guide to installing software with the apt-get command

Rate a Raspberry Pi software package from this list

Let other users know how well packages work on the Raspberry Pi.
Rating Key:
Working, Not Working, 1 Like, 1 Dislike, 1 Neutral, 1 View Comments
Speed-Slow, Speed-Usable, Speed Good

WWW: Please Note: each listing has a www link to a related webpage, the links are supplied by the author. I can't guarantee thay are all active and related to the listed package.

Distro Version: Jess(#) = Raspbian Jessie, Stretch(#) = Raspbian Stretch, Stretch & Jess(#) = same version for both. If only one Distro is listed then the package is only available on that distribution.

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SCIENCE

  • 3depict

    Stretch:(0.0.19-1) Jess:(0.0.16-2.1) visualisation and analysis for single valued point data www
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  • A

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  • abacas

    Stretch:(1.3.1-3) Jess:(1.3.1-2) Algorithm Based Automatic Contiguation of Assembled Sequences www
  • abinit

    Stretch:(8.0.8-1) Jess:(7.8.2-2) package for electronic structure calculations www
  • abyss

    Stretch:(2.0.2-2) de novo, parallel, sequence assembler for short reads www
  • acedb-other

    Stretch:(4.9.39+dfsg.02-1) Jess:(4.9.39+dfsg.01-5) retrieval of DNA or protein sequences www
  • acedb-other-belvu

    Stretch:(4.9.39+dfsg.02-1) Jess:(4.9.39+dfsg.01-5) multiple sequence alignment editor www
  • acedb-other-dotter

    Stretch:(4.9.39+dfsg.02-1) Jess:(4.9.39+dfsg.01-5) visualisation of sequence similarity www
  • aces3

    Stretch:(3.0.8-5.1+rpi1) Jess:(3.0.8-4) Advanced Concepts in Electronic Structure III www
  • aces3-data

    Stretch:(3.0.8-5.1+rpi1) Jess:(3.0.8-4) Advanced Concepts in Electronic Structure III www
  • achilles

    Stretch:(2-8.2) Jess:(2-8) An artificial life and evolution simulator www
  • adapterremoval

    Stretch:(2.2.0-1) rapid adapter trimming, identification, and read merging of gene sequences www
  • adapterremoval-examples

    Stretch:(2.2.0-1) rapid adapter trimming, identification, and read merging (example data) www
  • adun-core

    Stretch:(0.81-9+b1) Molecular Simulator www
  • adun.app

    Stretch:(0.81-9+b1) Jess:(0.81-6+b3) Molecular Simulator for GNUstep (GUI) www
  • aegean

    Stretch:(0.15.2+dfsg-1) integrated genome analysis toolkit www
  • aeskulap

    Stretch:(0.2.2b1+git20161206-1) Jess:(0.2.2b1-13) medical image viewer and DICOM network client www
  • aevol

    Stretch & Jess:(4.4-1) digital genetics model to run Evolution Experiments in silico www
  • aghermann

    Stretch:(1.1.2-1) Jess:(1.0.2-1) Sleep-research experiment manager www
  • alfa

    Stretch:(1.0-2) Automated Line Fitting Algorithm www
  • algotutor

    Stretch & Jess:(0.8.6-1) program for observing the intermediate steps of algorithm www
  • alien-hunter

    Stretch:(1.7-5) Jess:(1.7-3) Interpolated Variable Order Motifs to identify horizontally acquired DNA www
  • altree

    Stretch:(1.3.1-4+b2) Jess:(1.3.1-2+b1) program to perform phylogeny-based association and localization analysis www
  • altree-examples

    Stretch:(1.3.1-4) Jess:(1.3.1-2) example files for ALTree www
  • amap-align

    Stretch:(2.2-6) Jess:(2.2-4) Protein multiple alignment by sequence annealing www
  • ampliconnoise

    Stretch:(1.29-6) Jess:(1.29-2) removal of noise from 454 sequenced PCR amplicons www
  • andi

    Stretch:(0.10-2) Efficient Estimation of Evolutionary Distances www
  • anfo

    Stretch:(0.98-5) Jess:(0.98-4+b1) Short Read Aligner/Mapper from MPG www
  • ants

    Stretch & Jess:(1.9.2+svn680.dfsg-4) advanced normalization tools for brain and image analysis www
  • aoflagger

    Stretch:(2.9.0-1) Find RFI in radio astronomical observations www
  • apbs

    Stretch & Jess:(1.4-1) Adaptive Poisson Boltzmann Solver www
  • apertium

    Stretch:(3.4.0~r61013-5) Jess:(3.1.0-2) Shallow-transfer machine translation engine www
  • apertium-af-nl

    Stretch:(0.2.0~r58256-1) Apertium translation data for the Afrikaans-Dutch pair www
  • apertium-apy

    Stretch:(0.9.1~r343-2) Apertium APY service www
  • apertium-arg

    Stretch:(0.1.2~r65494-1) Apertium single language data for Aragonese www
  • apertium-arg-cat

    Stretch:(0.1.0~r64925-1) Apertium translation data for the Aragonese-Catalan pair www
  • apertium-br-fr

    Stretch:(0.5.0~r61325-2) Apertium linguistic data to translate between Breton and French www
  • apertium-ca-it

    Stretch:(0.1.1~r57554-1) Apertium translation data for the Catalan-Italian pair www
  • apertium-cat

    Stretch:(1.0.0~r65787-1) Apertium single language data for Catalan www
  • apertium-cy-en

    Stretch:(0.1.1~r57554-3) Apertium translation data for the Welsh-English pair www
  • apertium-dan

    Stretch:(0.5.0~r67099-1) Apertium single language data for Danish www
  • apertium-dan-nor

    Stretch:(1.3.0~r67099-1) Apertium translation data for the Danish-Norwegian pair www
  • apertium-dev

    Stretch:(3.4.0~r61013-5) Development tools and library for Apertium www
  • apertium-en-gl

    Stretch:(0.5.2~r57551-1) Apertium translation data for the English-Galician pair www
  • apertium-eo-en

    Stretch:(1.0.0~r63833-1) Apertium linguistic data to translate between Esperanto and English www
  • apertium-eo-fr

    Stretch:(0.9.0~r57551-1) Apertium translation data for the Esperanto-French pair www
  • apertium-es-ast

    Stretch:(1.1.0~r51165-1) Apertium translation data for the Spanish-Asturian pair www
  • apertium-es-it

    Stretch:(0.1.0~r51165-1) Apertium translation data for the Spanish-Italian pair www
  • apertium-eu-en

    Stretch:(0.3.1~r56205-1) Apertium translation data for the Basque-English pair www
  • apertium-fra

    Stretch:(1.0.0~r65786-1) Apertium single language data for French www
  • apertium-fra-cat

    Stretch:(1.1.0~r64309-1) Apertium translation data for the French-Catalan pair www
  • apertium-hbs

    Stretch:(0.5.0~r68212-2) Apertium single language data for Serbo-Croatian www
  • apertium-hbs-eng

    Stretch:(0.1.0~r57598-1) Apertium translation data for the Serbo-Croatian - English pair www
  • apertium-hbs-mkd

    Stretch:(0.1.0~r57554-1) Apertium translation data for the Serbo-Croatian-Macedonian pair www
  • apertium-hbs-slv

    Stretch:(0.1.0~r59294-1) Apertium translation data for the Serbo-Croatian-Slovenian pair www
  • apertium-hin

    Stretch:(0.1.0~r59158-1) Apertium single language data for Hindi www
  • apertium-id-ms

    Stretch:(0.1.1~r57551-1) Apertium translation data for the Indonesian-Malay pair www
  • apertium-is-sv

    Stretch:(0.1.0~r56030-1) Apertium translation data for the Icelandic-Swedish pair www
  • apertium-isl

    Stretch:(0.1.0~r65494-1) Apertium single language data for Icelandic www
  • apertium-isl-eng

    Stretch:(0.1.0~r66083-1) Apertium translation data for the Icelandic-English pair www
  • apertium-ita

    Stretch:(0.9.0~r72553-1) Apertium single language data for Italian www
  • apertium-kaz

    Stretch:(0.1.0~r61338-1) Apertium single language data for Kazakh www
  • apertium-kaz-tat

    Stretch:(0.2.1~r57554-1) Apertium translation data for the Kazakh-Tatar pair www
  • apertium-lex-tools

    Stretch:(0.1.1~r66150-1) Constraint-based lexical selection module www
  • apertium-mk-bg

    Stretch:(0.2.0~r49489-1) Apertium translation data for the Macedonian-Bulgarian pair www
  • apertium-mk-en

    Stretch:(0.1.1~r57554-1) Apertium translation data for the Macedonian-English pair www
  • apertium-mlt-ara

    Stretch:(0.2.0~r62623-1) Apertium translation data for the Maltese-Arabic pair www
  • apertium-nno

    Stretch:(0.9.0~r69513-1) Apertium single language data for Norwegian Nynorsk www
  • apertium-nno-nob

    Stretch:(1.1.0~r66076-1) Apertium translation data for the Norwegian Nynorsk-Norwegian Bokmål pair www
  • apertium-nob

    Stretch:(0.9.0~r69513-1) Apertium single language data for Norwegian Bokmål www
  • apertium-sme-nob

    Stretch:(0.6.0~r61921-1) Apertium translation data for the Northern Sami-Norwegian Bokmål pair www
  • apertium-spa

    Stretch:(0.1.0~r65494-1) Apertium single language data for Spanish www
  • apertium-spa-arg

    Stretch:(0.4.0~r64399-1) Apertium translation data for the Spanish-Aragonese pair www
  • apertium-srd

    Stretch:(0.9.0~r72792-1) Apertium single language data for Sardinian www
  • apertium-srd-ita

    Stretch:(0.9.0~r72554-1) Apertium translation data for the Sardinian-Italian pair www
  • apertium-swe

    Stretch:(0.7.0~r69513-1) Apertium single language data for Swedish www
  • apertium-swe-dan

    Stretch:(0.7.0~r66063-1) Apertium translation data for the Swedish-Danish pair www
  • apertium-tat

    Stretch:(0.1.0~r60887-1) Apertium single language data for Tatar www
  • apertium-urd

    Stretch:(0.1.0~r61311-1) Apertium single language data for Urdu www
  • apertium-urd-hin

    Stretch:(0.1.0~r64379-1) Apertium translation data for the Urdu-Hindi pair www
  • aragorn

    Stretch:(1.2.38-1) Jess:(1.2.36-4) tRNA and tmRNA detection in nucleotide sequences www
  • arden

    Stretch:(1.0-3) Jess:(1.0-1) specificity control for read alignments using an artificial reference www
  • art-nextgen-simulation-tools

    Stretch:(20160605+dfsg-2) simulation tools to generate synthetic next-generation sequencing reads www
  • art-nextgen-simulation-tools-profiles

    Stretch:(20160605+dfsg-2) profiles for art simulation tools www
  • artemis

    Stretch:(16.0.17+dfsg-1) genome browser and annotation tool www
  • artfastqgenerator

    Stretch:(0.0.20150519-2) outputs artificial FASTQ files derived from a reference genome www
  • artfastqgenerator-examples

    Stretch:(0.0.20150519-2) ou7puts artificial FASTQ files derived from a reference genome (examples) www
  • asdftool

    Stretch:(1.2.1-2) Command line tool to manipulate ASDF scientific data files www
  • ask

    Stretch:(1.1.1-1) Jess:(1.0.1-2) Adaptive Sampling Kit for big experimental spaces www
  • astro-tasks

    Stretch:(1.0) Debian Astronomy Pure Blend (tasksel tasks) www
  • astromatic

    Stretch:(1.1) Astronomical pipeline software collection www
  • astrometry-data-tycho2

    Stretch:(2-3) Astrometry.net Tycho-2 index files www
  • astrometry-data-tycho2-07

    Stretch:(2-3) Astrometry.net Tycho-2 index files (22'-30') www
  • astrometry-data-tycho2-07-bigendian

    Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (22'-30') www
  • astrometry-data-tycho2-07-littleendian

    Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (22'-30') www
  • astrometry-data-tycho2-08

    Stretch:(2-3) Astrometry.net Tycho-2 index files (30'-44') www
  • astrometry-data-tycho2-08-bigendian

    Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (30'-44') www
  • astrometry-data-tycho2-08-littleendian

    Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (30'-44') www
  • astrometry-data-tycho2-09

    Stretch:(2-3) Astrometry.net Tycho-2 index files (44'-60') www
  • astrometry-data-tycho2-09-bigendian

    Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (44'-60') www
  • astrometry-data-tycho2-09-littleendian

    Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (44'-60') www
  • astrometry-data-tycho2-10-19

    Stretch:(2-3) Astrometry.net Tycho-2 index files (60'-2000') www
  • astrometry-data-tycho2-10-19-bigendian

    Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (60'-2000') www
  • astrometry-data-tycho2-10-19-littleendian

    Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (60'-2000') www
  • astrometry.net

    Stretch:(0.70+dfsg-1) Astrometry plate solver www
  • astronomical-almanac

    Stretch & Jess:(5.6-4) astronomical almanac - calculate planet and star positions www
  • atac

    Stretch:(0~20150903+r2013-3+b2) genome assembly-to-assembly comparison www
  • augustus

    Stretch:(3.2.3+dfsg-1) gene prediction in eukaryotic genomes www
  • augustus-data

    Stretch:(3.2.3+dfsg-1) data files for AUGUSTUS www
  • auto-07p

    Stretch:(0.9.1+dfsg-3) Jess:(0.9.1+dfsg-1) software for continuation and bifurcation problems in ODE www
  • autodock

    Stretch:(4.2.6-3) Jess:(4.2.6-2) analysis of ligand binding to protein structure www
  • autodock-getdata

    Stretch:(4.2.6-3) Jess:(4.2.6-2) instructions for getData to collect compounds www
  • autodock-test

    Stretch:(4.2.6-3) Jess:(4.2.6-2) test files for AutoDock www
  • autodock-vina

    Stretch:(1.1.2-3+b1) Jess:(1.1.2-3) docking of small molecules to proteins www
  • autogrid

    Stretch:(4.2.6-3) Jess:(4.2.6-2) pre-calculate binding of ligands to their receptor www
  • autogrid-test

    Stretch:(4.2.6-3) Jess:(4.2.6-2) test files for AutoGrid www
  • avce00

    Stretch:(2.0.0-5) Jess:(2.0.0-3) Conversion of ESRI Arcinfo Vector Coverage in E00 format www
  • avogadro

    Stretch:(1.2.0-1+deb9u1) Jess:(1.0.3-10.1+b1) Molecular Graphics and Modelling System www
  • avogadro-data

    Stretch:(1.2.0-1+deb9u1) Jess:(1.0.3-10.1) Molecular Graphics and Modelling System (Data Files) www
  • aweather

    Stretch:(0.8.1-1.1) Jess:(0.8.1-1+b1) Advanced Weather Monitoring Program www
  • axe-demultiplexer

    Stretch:(0.3.2+dfsg1-1) Trie-based DNA sequencing read demultiplexer www
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  • B

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  • bagel-data

    Stretch:(0.0~git20170109-1) Computational Chemistry Package (data files) www
  • ballview

    Stretch:(1.4.3~beta1-3) Jess:(1.4.2+20140406-1+b1) free molecular modeling and molecular graphics tool www
  • bamtools

    Stretch:(2.4.1+dfsg-1) Jess:(2.3.0+dfsg-2) toolkit for manipulating BAM (genome alignment) files www
  • barrnap

    Stretch:(0.7+dfsg-2) rapid ribosomal RNA prediction www
  • bart

    Stretch:(0.4.00-1) tools for computational magnetic resonance imaging www
  • bauble

    Stretch:(0.9.7-2.1) Jess:(0.9.7-2) biodiversity collection manager software application www
  • bcftools

    Stretch:(1.3.1-1) genomic variant calling and manipulation of VCF/BCF files www
  • beagle

    Stretch:(4.1~160727-86a+dfsg-1) Genotype calling, genotype phasing and imputation of ungenotyped markers www
  • beast-mcmc

    Stretch:(1.8.4+dfsg.1-1) Bayesian MCMC phylogenetic inference www
  • beast2-mcmc

    Stretch:(2.4.4+dfsg-1) Bayesian MCMC phylogenetic inference www
  • bedtools

    Stretch:(2.26.0+dfsg-3) Jess:(2.21.0-1) suite of utilities for comparing genomic features www
  • bedtools-test

    Stretch:(2.26.0+dfsg-3) Jess:(2.21.0-1) test data for the bedtools package www
  • berkeley-express

    Stretch:(1.5.1-3) Streaming quantification for high-throughput sequencing www
  • bibus

    Stretch & Jess:(1.5.2-4) bibliographic database www
  • bio-eagle-examples

    Stretch:(2.3-3) Examples for bio-eagle www
  • bio-rainbow

    Stretch:(2.0.4-1) clustering and assembling short reads for bioinformatics www
  • biogenesis

    Stretch & Jess:(0.8-2) artificial life program that simulates evolution of organisms www
  • biomaj

    Stretch:(1.2.3-11) Jess:(1.2.3-4) biological data-bank updater www
  • biomaj-properties

    Stretch:(1.2.3-11) Jess:(1.2.3-4) biological data-bank updater - example properties files www
  • bioperl

    Stretch:(1.7.1-2) Jess:(1.6.924-1) Perl tools for computational molecular biology www
  • bioperl-run

    Stretch:(1.7.1-3) Jess:(1.6.9-2) BioPerl wrappers: scripts www
  • biosig-tools

    Stretch:(1.3.0-2.2) Jess:(1.3.0-2+b2) format conversion tools for biomedical data formats www
  • biosquid

    Stretch:(1.9g+cvs20050121-7) Jess:(1.9g+cvs20050121-4) utilities for biological sequence analysis www
  • bist

    Stretch:(0.5.2-1.1) Jess:(0.5.2-1) chemical drawing tool www
  • bkchem

    Stretch:(0.13.0-5) Jess:(0.13.0-4) Chemical structures editor www
  • blasr

    Stretch:(5.3+0-1) mapping single-molecule sequencing reads www
  • blast2

    Stretch:(1:2.6.0-1) Jess:(1:2.2.26.20120620-8) transitional dummy package to ncbi-blast+-legacy www
  • bmt

    Stretch:(0.6-1) software analysis benchmarking toolkit www
  • bodr

    Stretch & Jess:(10-1) Blue Obelisk Data Repository www
  • boinc-app-milkyway

    Stretch:(0.18d-4+b4) Jess:(0.18d-4+b1) Milkyway@home application for the BOINC client www
  • boinc-app-seti

    Stretch:(8.00~svn3363-3+rpi1) Jess:(7.28~svn2633-3+rpi1) SETI@home application for the BOINC client www
  • boinc-app-seti-graphics

    Stretch:(8.00~svn3363-3+rpi1) Jess:(7.28~svn2633-3+rpi1) SETI@home application for the BOINC client (with graphics) www
  • boolector

    Stretch & Jess:(1.5.118.6b56be4.121013-1) SMT solver for bit-vectors and arrays www
  • bowtie

    Stretch & Jess:(1.0.0-5) Ultrafast memory-efficient short read aligner www
  • bowtie-examples

    Stretch & Jess:(1.0.0-5) Examples for bowtie, the ultrafast memory-efficient short read aligner www
  • bowtie2-examples

    Stretch:(2.3.0-2) Jess:(2.2.4-1) Examples for bowtie2 www
  • boxshade

    Stretch:(3.3.1-10) Jess:(3.3.1-8) Pretty-printing of multiple sequence alignments www
  • bppphyview

    Stretch:(0.3.0-1.1) Jess:(0.3.0-1) Bio++ Phylogenetic Viewer
  • bppsuite

    Stretch:(2.2.0-0.1) Jess:(0.7.0-1) Bio++ program suite
  • brig

    Stretch:(0.95+dfsg-1) BLAST Ring Image Generator www
  • bwa

    Stretch & Jess:(0.6.2-1) Burrows-Wheeler Aligner www
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  • C

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  • cafeobj

    Stretch:(1.5.5-1) Jess:(1.5.2-2) new generation algebraic specification and programming language www
  • cafeobj-mode

    Stretch:(1.5.5-1) Emacs major mode for editing CafeOBJ source code www
  • caffe-tools-cpu

    Stretch:(1.0.0~rc4-1) Tools for fast, open framework for Deep Learning (CPU_ONLY) www
  • cain

    Stretch:(1.10+dfsg-2) Jess:(1.9-8) simulations of chemical reactions www
  • cain-examples

    Stretch:(1.10+dfsg-2) Jess:(1.9-8) examples for cain www
  • cain-solvers

    Stretch:(1.10+dfsg-2) Jess:(1.9-8) solvers for cain www
  • calculix-ccx

    Stretch:(2.11-1) Three-Dimensional Structural Finite Element Program www
  • calculix-cgx

    Stretch:(2.11+dfsg-1) Calculix cgx is a 3-dimensional pre- and post-processor for fem www
  • casacore-data-igrf

    Stretch:(10-1) International Geomagnetic Reference Field data for casacore www
  • casacore-data-lines

    Stretch:(0+git2016.11.26-2) Table of spectral line frequencies for casacore www
  • casacore-data-observatories

    Stretch:(0+git2016.11.02-1) Table of radio observatory coordinates for casacore www
  • casacore-data-sources

    Stretch:(2-2) Table of ICRF reference source coordinates for casacore www
  • casacore-data-tai-utc

    Stretch:(1.1) Difference table between TAI and UTC for casacore
  • casacore-tools

    Stretch:(2.2.0-2) Tools built with CASA www
  • cassbeam

    Stretch:(1.1-1) Cassegrain antenna modelling www
  • cassiopee

    Stretch:(1.0.5-1) Jess:(1.0.1+dfsg-3) index and search tool in genomic sequences www
  • cba

    Stretch:(0.3.6-4.1+b1) Jess:(0.3.6-4.1) Continuous Beam Analysis www
  • cbflib-bin

    Stretch & Jess:(0.9.2.2-1) utilities to manipulate CBF files www
  • cbmc

    Stretch:(5.6-1) Jess:(4.9-4) bounded model checker for C and C++ programs www
  • cclib

    Stretch:(1.3.1-1) Jess:(1.1-1) Parsers and algorithms for computational chemistry www
  • cd-hit

    Stretch:(4.6.6-2) Jess:(4.6.1-2012-08-27-2) suite of programs designed to quickly group sequences www
  • cdbfasta

    Stretch:(0.99-20100722-3) Jess:(0.99-20100722-1) Constant DataBase indexing and retrieval tools for multi-FASTA files www
  • celestia

    Stretch & Jess:(1.6.1+dfsg-3.1) 1real-time visual space simulation www
  • celestia-common

    Stretch & Jess:(1.6.1+dfsg-3.1) datafiles for Celestia, a real-time visual space simulation www
  • celestia-glut

    Stretch & Jess:(1.6.1+dfsg-3.1) real-time visual space simulation (GLUT frontend) www
  • cernlib

    Stretch:(20061220+dfsg3-4.3) Jess:(20061220+dfsg3-4.1) CERNLIB data analysis suite - general use metapackage www
  • cernlib-core

    Stretch:(20061220+dfsg3-4.3) Jess:(20061220+dfsg3-4.1) CERNLIB data analysis suite - main libraries and programs www
  • cernlib-extras

    Stretch:(20061220+dfsg3-4.3) Jess:(20061220+dfsg3-4.1) CERNLIB data analysis suite - extra programs www
  • cernlib-montecarlo

    Stretch:(20061220+dfsg3-3.1) Jess:(20061220+dfsg3-3) CERNLIB Monte Carlo libraries www
  • cg3

    Stretch:(0.9.9~r11624-1+b1) Tools for using the 3rd edition of Constraint Grammar (CG-3) www
  • cgns-convert

    Stretch:(3.3.0-4) Jess:(3.1.4.2-2+b1) CFD General Notation System - Conversion tools www
  • cgview

    Stretch:(0.0.20100111-2) Circular Genome Viewer www
  • ch5m3d

    Stretch & Jess:(1.2.5+dfsg-1) create and visualize 3-dimensional drawings of simple molecules www
  • chemical-structures

    Stretch & Jess:(2.2.dfsg.0-12) set of molecular structures in open formats
  • chemps2

    Stretch:(1.8.3-2) Executable to call libchemps2-2 from the command line www
  • chemtool

    Stretch & Jess:(1.6.14-1) chemical structures drawing program www
  • chimeraslayer

    Stretch:(20101212+dfsg1-1) Jess:(20101212+dfsg-1) detects likely chimeras in PCR amplified DNA www
  • choreonoid

    Stretch:(1.1.0+dfsg-6.2+b1) Jess:(1.1.0+dfsg-6.1+b2) Integrated robotics GUI environment www
  • choreonoid-data

    Stretch:(1.1.0+dfsg-6.2) Jess:(1.1.0+dfsg-6.1) Integrated robotics GUI environment - shared data www
  • choreonoid-plugins-base

    Stretch:(1.1.0+dfsg-6.2+b1) Jess:(1.1.0+dfsg-6.1+b2) Integrated robotics GUI environment - core plug-ins www
  • circlator

    Stretch:(1.4.1-1) circularize genome assemblies www
  • circos

    Stretch:(0.69.4+dfsg-1) Jess:(0.66-1) plotter for visualizing data www
  • circos-tools

    Stretch:(0.22-1) Jess:(0.18-1) plotter for visualizing data - helper utilities www
  • ckon

    Stretch:(0.7.1-3+b2) automatic build tool for ROOT data analysis software www
  • clearcut

    Stretch & Jess:(1.0.9-1) extremely efficient phylogenetic tree reconstruction www
  • clinica

    Stretch & Jess:(0.3.0-1) Simple medical records manager www
  • clinica-common

    Stretch & Jess:(0.3.0-1) Simple medical records manager (architecture independent files) www
  • clinica-dev

    Stretch & Jess:(0.3.0-1) Simple medical records manager (development files) www
  • clinica-plugins

    Stretch & Jess:(0.3.0-1) Simple medical records manager (plugins) www
  • clonalframe

    Stretch:(1.2-5) Jess:(1.2-3) inference of bacterial microevolution using multilocus sequence data www
  • clustalo

    Stretch:(1.2.4-1) Jess:(1.2.1-1) General purpose multiple sequence alignment program for proteins www
  • clustalw

    Stretch:(2.1+lgpl-5) Jess:(2.1+lgpl-4) global multiple nucleotide or peptide sequence alignment www
  • clustalx

    Stretch:(2.1+lgpl-5) Jess:(2.1+lgpl-3) Multiple alignment of nucleic acid and protein sequences (graphical interface) www
  • cmor-tables

    Stretch:(3.2-1) MIP tables for the Climate Model Output Rewriter library www
  • cmtk

    Stretch:(3.3.1-1.1) Jess:(3.2.2-1.3) Computational Morphometry Toolkit www
  • cnrun

    Stretch:(1.1.14-1.1) Jess:(1.1.14-1) NeuroML-capable neuronal network simulator www
  • code-aster-gui

    Stretch & Jess:(1.13.1-2) Graphical user interface for Code_Aster - client www
  • code-aster-run

    Stretch & Jess:(1.13.1-2) Graphical user interface for Code_Aster - server www
  • code-saturne

    Stretch:(4.3.3+repack-1) Jess:(3.3.2-4) General purpose Computational Fluid Dynamics (CFD) software www
  • code-saturne-bin

    Stretch:(4.3.3+repack-1) Jess:(3.3.2-4) General purpose Computational Fluid Dynamics (CFD) software - binaries www
  • code-saturne-data

    Stretch:(4.3.3+repack-1) Jess:(3.3.2-4) General purpose Computational Fluid Dynamics (CFD) software - data www
  • code-saturne-doc

    Stretch:(4.3.3+repack-1) Jess:(3.3.2-4) General purpose Computational Fluid Dynamics (CFD) software - Documentation www
  • code-saturne-include

    Stretch:(4.3.3+repack-1) Jess:(3.3.2-4) General purpose Computational Fluid Dynamics (CFD) software - includes www
  • codonw

    Stretch:(1.4.4-3) Correspondence Analysis of Codon Usage www
  • coinor-cbc

    Stretch:(2.8.12-1+b1) Jess:(2.8.12-1) Coin-or branch-and-cut mixed integer programming solver www
  • coinor-clp

    Stretch:(1.15.10-3) Jess:(1.15.10-1) Coin-or linear programming solver www
  • coinor-csdp

    Stretch:(6.1.1-1+b1) Jess:(6.1.1-1) A software package for semidefinite programming www
  • coinor-libcbc3

    Stretch:(2.8.12-1+b1) Jess:(2.8.12-1) Coin-or branch-and-cut mixed integer programming solver (shared libraries) www
  • coinor-libcgl1

    Stretch:(0.58.9-1+b1) Jess:(0.58.9-1) COIN-OR Cut Generation Library www
  • coinor-libclp1

    Stretch:(1.15.10-3) Jess:(1.15.10-1) Coin-or linear programming solver (shared libraries) www
  • coinor-libcoinutils3v5

    Stretch:(2.9.15-4) Coin-or collection of utility classes (binaries and libraries) www
  • coinor-libdylp0

    Stretch & Jess:(1.6.0-1.1) Linear programming solver using the dynamic simplex algorithm www
  • coinor-libflopc++0

    Stretch:(1.0.6-3.1+b2) Jess:(1.0.6-3.1+b1) Formulation of Linear Optimization Problems in C++ www
  • coinor-libosi1v5

    Stretch:(0.106.9-2) COIN-OR Open Solver Interface www
  • coinor-libsymphony3

    Stretch:(5.6.1-1+b1) Jess:(5.6.1-1) COIN-OR solver for mixed-integer linear programs (shared libraries) www
  • coinor-libvol0

    Stretch & Jess:(1.1.7-1) Coin-or linear programming solver www
  • coinor-symphony

    Stretch:(5.6.1-1+b1) Jess:(5.6.1-1) COIN-OR solver for mixed-integer linear programs www
  • comet-ms

    Stretch:(2014022-3+b2) Tandem mass spectrometry (MS/MS) search engine www
  • concavity

    Stretch:(0.1+dfsg.1-1) Jess:(0.1-2) predictor of protein ligand binding sites from structure and conservation www
  • connectome-workbench

    Stretch:(1.2.3+git3-g7b83782-1) Jess:(1.0-2) brain visualization, analysis and discovery tool www
  • conquest-common

    Stretch & Jess:(1.4.17d-1) ConQuest DICOM Server - common files www
  • conquest-dbase

    Stretch & Jess:(1.4.17d-1) ConQuest DICOM Server - DBaseIII backend www
  • conquest-mysql

    Stretch & Jess:(1.4.17d-1) ConQuest DICOM Server - MySQL backend www
  • conquest-postgres

    Stretch & Jess:(1.4.17d-1) ConQuest DICOM Server - PostgreSQL backend www
  • conquest-sqlite

    Stretch & Jess:(1.4.17d-1) ConQuest DICOM Server - SQLite backend www
  • conservation-code

    Stretch:(20110309.0-5) Jess:(20110309.0-3) protein sequence conservation scoring tool www
  • cp2k

    Stretch:(4.1-1) Jess:(2.5.1-3) Ab Initio Molecular Dynamics www
  • cp2k-data

    Stretch:(4.1-1) Jess:(2.5.1-3) Ab Initio Molecular Dynamics (data files) www
  • cpl-plugin-amber

    Stretch:(4.3.4+dfsg-1+b1) Jess:(4.3.1+dfsg-1) ESO data reduction pipeline for the AMBER instrument www
  • cpl-plugin-fors

    Stretch:(5.3.11+dfsg-1) Jess:(5.0.0+dfsg-2) ESO data reduction pipeline for the FORS1/2 instruments www
  • cpl-plugin-giraf

    Stretch:(2.15+dfsg-1+b1) Jess:(2.12.1+dfsg-1) ESO data reduction pipeline for the GIRAFFE instrument www
  • cpl-plugin-hawki

    Stretch:(1.8.21+dfsg-1) Jess:(1.8.14+dfsg-2) ESO data reduction pipeline for the HAWK-I instrument www
  • cpl-plugin-hawki-calib

    Stretch:(1.8.21+dfsg-1) Jess:(1.8.14+dfsg-2) ESO data reduction pipeline calibration data downloader for HAWK-I www
  • cpl-plugin-kmos

    Stretch:(1.4.0+dfsg-1) Jess:(1.3.5+dfsg-1) ESO data reduction pipeline for the KMOS instrument www
  • cpl-plugin-muse

    Stretch:(1.6.2+dfsg-1) ESO data reduction pipeline for the MUSE instrument www
  • cpl-plugin-naco

    Stretch:(4.4.1+dfsg-3) ESO data reduction pipeline for the NaCo instrument www
  • cpl-plugin-sinfo

    Stretch:(2.9.0+dfsg-1) Jess:(2.5.2+dfsg-2) ESO data reduction pipeline for the SINFONI instrument www
  • cpl-plugin-uves

    Stretch:(5.7.0+dfsg-1+b1) Jess:(5.4.3+dfsg-1) ESO data reduction pipeline for the UVES instrument www
  • cpl-plugin-vimos

    Stretch:(3.1.7+dfsg-1+b1) Jess:(2.9.15+dfsg-1) ESO data reduction pipeline for the VIMOS instrument www
  • cpl-plugin-visir

    Stretch:(4.3.0+dfsg1-1+b1) ESO data reduction pipeline for the VISIR instrument www
  • cpl-plugin-xshoo

    Stretch:(2.8.4+dfsg-3) Jess:(2.5.2+dfsg-1) ESO data reduction pipeline for the XSHOOTER instrument www
  • critterding

    Stretch:(1.0-beta12.1-1.3) Jess:(1.0-beta12.1-1.2) Evolving Artificial Life www
  • ctsim

    Stretch:(5.2.0-4) Jess:(5.2.0-2) Computed tomography simulator www
  • ctsim-help

    Stretch:(5.2.0-4) Jess:(5.2.0-2) Online help file for CTSim www
  • cutadapt

    Stretch:(1.12-2) Clean biological sequences from high-throughput sequencing reads www
  • cwltool

    Stretch:(1.0.20170114120503-1) Common workflow language reference implementation www
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  • daligner

    Stretch:(1.0+20161119-1) local alignment discovery between long nucleotide sequencing reads www
  • dans-gdal-scripts

    Stretch:(0.24-1+b1) Jess:(0.23-2+b1) GDAL contributed tools by Geographic Information Network of Alaska www
  • dascrubber

    Stretch:(0~20160601-2) alignment-based scrubbing pipeline for DNA sequencing reads www
  • datalad

    Stretch:(0.4.1-1) data files crawler and data distribution www
  • dawg

    Stretch:(1.2-1) program to simulate the evolution of recombinant DNA sequences www
  • dazzdb

    Stretch:(1.0+20161112-2) manage nucleotide sequencing read data www
  • dcm2niix

    Stretch:(1.0.20161101-1) next generation DICOM to NIfTI converter www
  • dcmtk

    Stretch:(3.6.1~20160216-4) Jess:(3.6.0-15+deb8u1) OFFIS DICOM toolkit command line utilities www
  • debian-astro-logo

    Stretch:(1.0) Debian Astronomy Pure Blends Logo www
  • dh-r

    Stretch:(20161219) Debian helper tools for packaging R libraries
  • dialign

    Stretch:(2.2.1-8) Jess:(2.2.1-7) Segment-based multiple sequence alignment www
  • dialign-tx

    Stretch:(1.0.2-9) Jess:(1.0.2-7) Segment-based multiple sequence alignment www
  • dialign-tx-data

    Stretch:(1.0.2-9) Jess:(1.0.2-7) Segment-based multiple sequence alignment (data files) www
  • dicomnifti

    Stretch & Jess:(2.32.1-1) converts DICOM files into the NIfTI format www
  • dicompyler

    Stretch:(0.4.2-3) Jess:(0.4.2-2) radiation therapy research platform www
  • dimbl

    Stretch:(0.15-1) Jess:(0.12-2) Distributed Memory Based Learner www
  • dindel

    Stretch:(1.01+dfsg-4) determines indel calls from short-read data www
  • discosnp

    Stretch:(1.2.6-1) Jess:(1.2.5-1) discovering Single Nucleotide Polymorphism from raw set(s) of reads www
  • disulfinder

    Stretch:(1.2.11-6) Jess:(1.2.11-4) cysteines disulfide bonding state and connectivity predictor www
  • disulfinder-data

    Stretch:(1.2.11-6) Jess:(1.2.11-4) data files for predictor of disulfide bonds in proteins www
  • dnaclust

    Stretch:(3-4) Jess:(3-2) tool for clustering millions of short DNA sequences www
  • dotur

    Stretch & Jess:(1.53-2) distance based OTU and richness estimation www
  • dozzaqueux

    Stretch:(3.50-1) Jess:(3.35-2) simulator for chemical mixtures www
  • dozzaqueux-data

    Stretch:(3.50-1) Jess:(3.35-2) databases for chemical mixtures www
  • dpuser

    Stretch:(3.3+p1+dfsg-2) Interactive language for handling numbers, strings, and matrices www
  • drawxtl

    Stretch:(5.5-3+b1) Jess:(5.5-3) crystal structure viewer www
  • drslib

    Stretch & Jess:(0.3.0a3-5) Command-line tools for the Data Reference Syntax library www
  • dsdp

    Stretch:(5.8-9.4) Jess:(5.8-9.1) Software for Semidefinite Programming www
  • dssp

    Stretch:(2.2.1-3) Jess:(2.2.1-2) protein secondary structure assignment based on 3D structure www
  • dwgsim

    Stretch:(0.1.11-3) short sequencing read simulator www
  • dx

    Stretch:(1:4.4.4-9+b1) Jess:(1:4.4.4-7+b1) OpenDX (IBM Visualization Data Explorer) - main package www
  • dxsamples

    Stretch:(4.4.0-3) Jess:(4.4.0-1) Sample programs for the OpenDX Data Explorer www
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  • e00compr

    Stretch:(1.0.1-3) Jess:(1.0.1-2) Program to read/write Arcinfo compressed E00 files www
  • ea-utils

    Stretch:(1.1.2+dfsg-4+b2) command-line tools for processing biological sequencing data www
  • easychem

    Stretch & Jess:(0.6-8) Draw high-quality molecules and 2D chemical formulas www
  • ecaccess

    Stretch & Jess:(4.0.1-1) clients to access ECMWF facilities www
  • ecopcr

    Stretch:(0.5.0+dfsg-1) estimate PCR barcode primers quality www
  • edfbrowser

    Stretch:(1.58-1) Jess:(1.54-2) viewer for biosignal storage files such as bdf and edf www
  • edtsurf

    Stretch:(0.2009-4) Jess:(0.2009-3) triangulated mesh surfaces for protein structures www
  • eficas

    Stretch:(6.4.0-1-1.2) Jess:(6.4.0-1-1.1) Graphical editor for Code Aster command files www
  • eigensoft

    Stretch:(6.1.4+dfsg-1) reduction of population bias for genetic analyses www
  • elk-lapw

    Stretch:(4.0.15-2) Jess:(2.3.22-1) All-Electron Density-Functional Electronic Structure Code www
  • elki

    Stretch:(0.7.1-3) Jess:(0.6.0-2) Data mining algorithm development framework www
  • elki-dev

    Stretch:(0.7.1-3) Data mining algorithm development framework - development files www
  • embassy-domainatrix

    Stretch:(0.1.660-1) Jess:(0.1.650-1) Extra EMBOSS commands to handle domain classification file www
  • embassy-domalign

    Stretch:(0.1.660-1) Jess:(0.1.650-1) Extra EMBOSS commands for protein domain alignment www
  • embassy-domsearch

    Stretch:(1:0.1.660-1) Jess:(1:0.1.650-1) Extra EMBOSS commands to search for protein domains www
  • emboss

    Stretch:(6.6.0+dfsg-6) Jess:(6.6.0+dfsg-1) European molecular biology open software suite www
  • emboss-data

    Stretch:(6.6.0+dfsg-6) Jess:(6.6.0+dfsg-1) data files for the EMBOSS package www
  • emboss-explorer

    Stretch & Jess:(2.2.0-8) web-based GUI to EMBOSS www
  • emboss-lib

    Stretch:(6.6.0+dfsg-6) Jess:(6.6.0+dfsg-1) EMBOSS Libraries www
  • engauge-digitizer

    Stretch:(9.7+ds.1-1) Jess:(5.2-1) interactively extracts numbers from bitmap graphs or maps www
  • ent

    Stretch:(1.2debian-1) Jess:(1.1debian-4) pseudorandom number sequence test program www
  • epigrass

    Stretch:(2.4.7-1+b2) Jess:(2.4.0-2) scientific tool for simulations and scenario analysis in network epidemiology www
  • epsilon-bin

    Stretch:(0.9.2+dfsg-2) Jess:(0.9.2-2) Library for wavelet image compression - tools www
  • ergo

    Stretch:(3.5-1) Jess:(3.4.0-1) Quantum chemistry program for large-scale calculations www
  • eso-midas

    Stretch:(15.09pl1.0-2) Jess:(13.09pl1.4-1) European Southern Observatory Munich Image Data Analysis System www
  • eso-pipelines

    Stretch:(1.2) ESO VLT Instrument pipeline collection
  • esorex

    Stretch:(3.12.3-1) Jess:(3.11-1) Execution Tool for European Southern Observatory pipelines www
  • esys-particle

    Stretch:(2.3.4+dfsg1-4) Jess:(2.3-2) Software for particle-based numerical modelling. MPI version. www
  • etsf-io

    Stretch:(1.0.4-1.1) Jess:(1.0.3-4) Binary tools to check, merge and read ETSF files www
  • exonerate

    Stretch:(2.4.0-2) Jess:(2.2.0-6) generic tool for pairwise sequence comparison www
  • expeyes

    Stretch:(4.2.1+dfsg-1) Jess:(3.2.0-1) hardware & software framework for developing science experiments www
  • expeyes-clib

    Stretch:(4.2.1+dfsg-1) Jess:(3.2.0-1) hardware & software framework for developing science experiments www
  • extrema

    Stretch & Jess:(4.4.5.dfsg-3) powerful visualization and data analysis tool www
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  • fact++

    Stretch:(1.6.5~dfsg-1) Jess:(1.6.2~dfsg-2) description logic reasoner for the semantic web www
  • falconkit

    Stretch:(0.7-1) genome assembly toolkit www
  • fastahack

    Stretch:(0.0+20160702-1) utility for indexing and sequence extraction from FASTA files www
  • fastaq

    Stretch:(3.14.0-1) Jess:(1.5.0-1) FASTA and FASTQ file manipulation tools www
  • fastdnaml

    Stretch:(1.2.2-11) Jess:(1.2.2-10) Tool for construction of phylogenetic trees of DNA sequences www
  • fastlink

    Stretch:(4.1P-fix100+dfsg-1) Jess:(4.1P-fix95-3) faster version of pedigree programs of Linkage www
  • fastml

    Stretch:(3.1-3) maximum likelihood ancestral amino-acid sequence reconstruction www
  • fastqc

    Stretch:(0.11.5+dfsg-6) Jess:(0.11.2+dfsg-3) quality control for high throughput sequence data www
  • fastqtl

    Stretch:(2.184+dfsg-5) Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes www
  • fasttree

    Stretch:(2.1.9-1) Jess:(2.1.7-2) phylogenetic trees from alignments of nucleotide or protein sequences www
  • fastx-toolkit

    Stretch:(0.0.14-3) Jess:(0.0.14-1) FASTQ/A short nucleotide reads pre-processing tools www
  • fcc

    Stretch & Jess:(2.8-1) Script to compile C/C++ programs and link to Fortran libraries www
  • feedgnuplot

    Stretch:(1.40-1) Jess:(1.34-2) Pipe-oriented frontend to Gnuplot www
  • ffindex

    Stretch:(0.9.9.7-3) Jess:(0.9.9.3-2) simple index/database for huge amounts of small files www
  • figtree

    Stretch:(1.4.2+dfsg-2) Jess:(1.4-2) graphical phylogenetic tree viewer www
  • filo

    Stretch:(1.1.0-3) Jess:(1.1+2011123001.1) FILe and stream Operations www
  • fiona

    Stretch:(1.7.1-1) Command line tool for reading/writing vector geospatial data www
  • fitgcp

    Stretch:(0.0.20150429-1) fitting genome coverage distributions with mixture models www
  • fitscut

    Stretch:(1.4.4-4+b2) Extract cutouts from FITS image format files www
  • fitsh

    Stretch:(0.9.2-1) Software package for astronomical image processing www
  • fitspng

    Stretch:(0.3.5-1+b1) FITS to PNG converter www
  • fitsverify

    Stretch:(4.18-1+b1) Jess:(4.17-1) FITS File Format-Verification Tool www
  • fityk

    Stretch:(1.3.0-1) Jess:(1.2.1-0.1) general-purpose nonlinear curve fitting and data analysis www
  • flexbar

    Stretch:(2.50-2) flexible barcode and adapter removal for sequencing platforms www
  • flexpart

    Stretch:(9.02-15) Jess:(9.02-9) Particle Dispersion model for tracing air transport phenomena www
  • flextra

    Stretch:(5.0-6) Jess:(5.0-2.1) Trajectory model for tracing air transport phenomena www
  • foma-bin

    Stretch:(0.9.18+r243-1) Xerox-compatible finite-state compiler - library www
  • fractalnow

    Stretch:(0.8.1-1.1) Jess:(0.8.1-1) Fast, advanced fractal generator www
  • free42-nologo

    Stretch:(1.4.77-1.2) Jess:(1.4.77-1.1) Free42 is a re-implementation of the HP-42S calculator www
  • freecad

    Stretch:(0.16+dfsg2-3) Jess:(0.14.3702+dfsg-3) Extensible Open Source CAx program (alpha) www
  • freecontact

    Stretch:(1.0.21-5) Jess:(1.0.21-3) fast protein contact predictor www
  • freediams

    Stretch & Jess:(0.9.4-1) pharmaceutical drug prescription and interaction manager www
  • freemedforms-common-resources

    Stretch & Jess:(0.9.4-1) common data for the FreeMedForms project applications www
  • freemedforms-emr

    Stretch & Jess:(0.9.4-1) electronic medical record manager www
  • freemedforms-emr-resources

    Stretch & Jess:(0.9.4-1) data for the FreeMedForms EMR www
  • freemedforms-freedata

    Stretch & Jess:(0.9.4-1) free extra-data for the FreeMedForms project www
  • freemedforms-libs

    Stretch & Jess:(0.9.4-1) common libs for the FreeMedForms project www
  • freemedforms-project

    Stretch & Jess:(0.9.4-1) FreeMedForms project www
  • freemedforms-theme

    Stretch & Jess:(0.9.4-1) theme for the FreeMedForms project www
  • frog

    Stretch:(0.13.7-1) Jess:(0.12.17-7.1+b1) tagger and parser for natural languages (runtime) www
  • frogdata

    Stretch:(0.13-1) Jess:(0.4-1) Data files for Frog www
  • fsa

    Stretch:(1.15.9+dfsg-3) Fast Statistical Alignment of protein, RNA or DNA sequences www
  • ftools-fv

    Stretch:(5.4+dfsg-2) Jess:(5.3+dfsg-5) Tool for viewing and editing FITS format files www
  • ftools-pow

    Stretch:(5.4+dfsg-2+b1) Jess:(5.3+dfsg-5) Curve plotting and image display interface tool www
  • funtools

    Stretch:(1.4.7-1) Jess:(1.4.4+dfsg2-1) Minimal buy-in FITS utility package www
  • fxt-tools

    Stretch:(0.3.2-2) Jess:(0.3.0-1) Multithreaded tracing library www
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  • g3data

    Stretch & Jess:(1:1.5.3-2.1) extract data from scanned graphs www
  • gabedit

    Stretch:(2.4.8-3) Jess:(2.4.8-1) graphical user interface to Ab Initio packages www
  • galileo

    Stretch:(0.5.1-4) Utility to securely synchronize a Fitbit device with the Fitbit web service www
  • galileo-daemon

    Stretch:(0.5.1-4) Utility to securely synchronize a Fitbit device - daemon www
  • gamgi

    Stretch & Jess:(0.17.1-1) General Atomistic Modelling Graphic Interface (GAMGI) www
  • gamgi-data

    Stretch & Jess:(0.17.1-1) General Atomistic Modelling Graphic Interface (data) www
  • garli

    Stretch:(2.1-1) phylogenetic analysis of molecular sequence data using maximum-likelihood www
  • garli-examples

    Stretch:(2.1-1) phylogenetic analysis of molecular sequence data using maximum-likelihood (examples) www
  • garlic

    Stretch & Jess:(1.6-1.1) A visualization program for biomolecules www
  • gausssum

    Stretch:(3.0.1.1-1) Jess:(2.2.6.1-1) parse and display Gaussian, GAMESS, and etc's output www
  • gazebo7

    Stretch:(7.3.1+dfsg-3+b3) Open Source Robotics Simulator - Binaries www
  • gazebo7-common

    Stretch:(7.3.1+dfsg-3) Open Source Robotics Simulator - Shared files www
  • gazebo7-plugin-base

    Stretch:(7.3.1+dfsg-3+b3) Open Source Robotics Simulator - base plug-ins www
  • gbrowse

    Stretch:(2.56+dfsg-2) Jess:(2.54+dfsg-3) GMOD Generic Genome Browser www
  • gbrowse-calign

    Stretch:(2.56+dfsg-2) Jess:(2.54+dfsg-3+b1) CAlign helper www
  • gbrowse-data

    Stretch:(2.56+dfsg-2) Jess:(2.54+dfsg-3) Sample data to use GBrowse www
  • gbutils

    Stretch:(5.6.8-1) utilities for command line econometrics www
  • gchempaint

    Stretch:(0.14.15-1) Jess:(0.14.9-1) 2D chemical structures editor for the GNOME2 desktop www
  • gcrystal

    Stretch:(0.14.15-1) Jess:(0.14.9-1) lightweight crystal structures visualizer www
  • gcu-bin

    Stretch:(0.14.15-1) Jess:(0.14.9-1) GNOME chemistry utils (helper applications) www
  • gcu-plugin

    Stretch:(0.14.15-1) Jess:(0.14.9-1) GNOME chemistry utils (browser plugin) www
  • gcx

    Stretch & Jess:(1.3-1.1) astronomical image processing and photometry gtk+ application www
  • gdal-bin

    Stretch:(2.1.2+dfsg-5) Jess:(1.10.1+dfsg-8+b2) Geospatial Data Abstraction Library - Utility programs www
  • gdis

    Stretch & Jess:(0.90-5) molecular and crystal model viewer www
  • gdis-data

    Stretch & Jess:(0.90-5) molecular and crystal model viewer (data files) www
  • gdl-astrolib

    Stretch:(2016.11.10+dfsg-1) Low-level astronomy software for GDL www
  • gdl-coyote

    Stretch:(2016.11.13-1) GDL library from D. Fannings IDL courses www
  • gdl-mpfit

    Stretch:(1.84+2016.05.19-1) Robust non-linear least squares curve fitting for GDL www
  • gdpc

    Stretch:(2.2.5-6) Jess:(2.2.5-3) visualiser of molecular dynamic simulations www
  • gdpc-examples

    Stretch:(2.2.5-6) Jess:(2.2.5-3) example files for the gdpc program www
  • geant321

    Stretch & Jess:(1:3.21.14.dfsg-11) [Physics] Particle detector description and simulation tool www
  • geant321-data

    Stretch & Jess:(1:3.21.14.dfsg-11) [Physics] Data for GEANT 3.21 detector simulator www
  • gelemental

    Stretch:(1.2.0-10) Jess:(1.2.0-9) Periodic Table viewer www
  • genometools

    Stretch:(1.5.9+ds-4) Jess:(1.5.3-2) versatile genome analysis toolkit www
  • genometools-common

    Stretch:(1.5.9+ds-4) Jess:(1.5.3-2) shared data files for GenomeTools www
  • gentle

    Stretch:(1.9+cvs20100605+dfsg1-5) Jess:(1.9+cvs20100605+dfsg1-3) suite to plan genetic cloning www
  • geographiclib-tools

    Stretch:(1.46-2+b2) Jess:(1.37-3) C++ library to solve some geodesic problems -- tools www
  • geotiff-bin

    Stretch:(1.4.2-2+b1) Jess:(1.4.0-5) GeoTIFF (geografic enabled TIFF) library -- tools www
  • gerris

    Stretch:(20131206+dfsg-17) Jess:(20131206+dfsg-5) Fluid Flow Solver www
  • getdata

    Stretch & Jess:(0.2-1) management of external databases www
  • gff2aplot

    Stretch:(2.0-8) Jess:(2.0-7) pair-wise alignment-plots for genomic sequences in PostScript www
  • gff2ps

    Stretch:(0.98d-5) Jess:(0.98d-4) produces PostScript graphical output from GFF-files www
  • gfsview

    Stretch:(20121130+dfsg-4) Jess:(20121130+dfsg-1+b1) graphical viewer for Gerris simulation files www
  • gfsview-batch

    Stretch:(20121130+dfsg-4) batch-version of viewer for Gerris simulation files www
  • ghkl

    Stretch:(5.0.0.2173-2) Jess:(4.0.3-4) diffractometer computation control application www
  • giella-core

    Stretch:(0.1.1~r129227+svn121148-1) GTCORE files for building Giellatekno language packages www
  • giella-sme

    Stretch:(0.0.20150917~r121176-1) Giellatekno single language data for North Saami www
  • giella-sme-dev

    Stretch:(0.0.20150917~r121176-1) Giellatekno single language data for North Saami (dev extras) www
  • ginga

    Stretch:(2.6.1-2) Astronomical image viewer www
  • glam2

    Stretch & Jess:(1064-3) gapped protein motifs from unaligned sequences www
  • glueviz

    Stretch:(0.9.1+dfsg-1) Linked data visualization www
  • gmt

    Stretch:(5.3.1+dfsg-2+b1) Jess:(4.5.12-1) Generic Mapping Tools www
  • gmt-common

    Stretch:(5.3.1+dfsg-2) Generic Mapping Tools - Architecture-independent files www
  • gmt-dcw

    Stretch:(1.1.2-2) Digital Chart of the World (DCW) for GMT www
  • gmt-gshhg

    Stretch:(2.3.6-2) Global Self-consistent Hierarchical High-resolution Geography (GSHHG) www
  • gmt-gshhg-full

    Stretch:(2.3.6-2) Full resolution coastlines for the Generic Mapping Tools www
  • gmt-gshhg-high

    Stretch:(2.3.6-2) High resolution coastlines for the Generic Mapping Tools www
  • gmt-gshhg-low

    Stretch:(2.3.6-2) Low resolution coastlines for the Generic Mapping Tools www
  • gnuastro

    Stretch:(0.2.33-1) GNU Astronomy Utilities programs www
  • gnuhealth

    Stretch & Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System www
  • gnuhealth-client

    Stretch & Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System - Client www
  • gnuhealth-server

    Stretch & Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System - Server www
  • gpaw

    Stretch:(1.1.0-1+b1) DFT and beyond within the projector-augmented wave method www
  • gpaw-data

    Stretch:(0.9.20000-1) gpaw datasets/setups www
  • gperiodic

    Stretch & Jess:(2.0.10-7) periodic table application www
  • gpx

    Stretch:(2.5.2-1) Jess:(0~20140109+git3570fc9-2) Gcode to x3g conversion post processor www
  • gpx2shp

    Stretch:(0.71.0-4+b1) Jess:(0.71.0-1) convert GPS or GPX file to ESRI Shape file www
  • gr-fcdproplus

    Stretch:(3.7.25.4b6464b-2) Jess:(3.7.11-3) Funcube Dongle Pro Plus controller for GNU Radio www
  • grads

    Stretch:(3:2.1.0-2) Jess:(2:2.0.2-3+b1) Grid Analysis and Display System for earth science data www
  • graphlan

    Stretch:(1.1-2) circular representations of taxonomic and phylogenetic trees www
  • grass

    Stretch:(7.2.0-2) Jess:(6.4.4-1) Geographic Resources Analysis Support System (GRASS GIS) www
  • grass-core

    Stretch:(7.2.0-2) Jess:(6.4.4-1) GRASS GIS core components www
  • grass-gui

    Stretch:(7.2.0-2) Jess:(6.4.4-1) GRASS GIS graphical user interfaces www
  • gravit

    Stretch:(0.5.1+dfsg-2) visually stunning gravity simulator www
  • gravit-data

    Stretch:(0.5.1+dfsg-2) Jess:(0.5.1+dfsg-1) data files for Gravit www
  • gri

    Stretch:(2.12.23-10) Jess:(2.12.23-8) a language for scientific illustration www
  • grinder

    Stretch:(0.5.4-1) Jess:(0.5.3-3) Versatile omics shotgun and amplicon sequencing read simulator www
  • gromacs

    Stretch:(2016.1-2) Jess:(5.0.2-1) Molecular dynamics simulator, with building and analysis tools www
  • gromacs-data

    Stretch:(2016.1-2) Jess:(5.0.2-1) GROMACS molecular dynamics sim, data and documentation www
  • gromacs-mpich

    Stretch:(2016.1-2) Jess:(5.0.2-1) Molecular dynamics sim, binaries for MPICH parallelization www
  • gromacs-openmpi

    Stretch:(2016.1-2) Jess:(5.0.2-1) Molecular dynamics sim, binaries for OpenMPI parallelization www
  • gvb

    Stretch & Jess:(1.4-1) visual simulator of 1 and 2-dimensional vibrations www
  • gwama

    Stretch:(2.2.2+dfsg-1) Genome-Wide Association Meta Analysis www
  • gwyddion

    Stretch:(2.47-1) Jess:(2.38-2) Scanning Probe Microscopy visualization and analysis tool www
  • gwyddion-common

    Stretch:(2.47-1) Jess:(2.38-2) architecture-independent files for Gwyddion SPM analysis tool www
  • gwyddion-plugins

    Stretch:(2.47-1) Jess:(2.38-2) plugins for Gwyddion SPM analysis tool www
  • gyoto

    Stretch:(1.2.0-2) Jess:(0.2.3-1) General relativistic geodesic integration and ray-tracing www
  • gyoto-bin

    Stretch:(1.2.0-2) General relativistic ray-tracing command-line interface www
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  • H

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  • h5utils

    Stretch:(1.12.1-6+b1) Jess:(1.12.1-2.1+b1) HDF5 files visualization tools www
  • harminv

    Stretch:(1.4-1) Jess:(1.3.1-10) extraction of complex frequencies and amplitudes from time series www
  • harvest-tools

    Stretch:(1.3-1) archiving and postprocessing for reference-compressed genomic multi-alignments www
  • hdf-compass

    Stretch:(0.6.0-1) viewer for HDF5 and related formats www
  • hdf5-helpers

    Stretch:(1.10.0-patch1+docs-3) Jess:(1.8.13+docs-15+deb8u1) Hierarchical Data Format 5 (HDF5) - Helper tools www
  • hdf5-tools

    Stretch:(1.10.0-patch1+docs-3) Jess:(1.8.13+docs-15+deb8u1) Hierarchical Data Format 5 (HDF5) - Runtime tools www
  • hdfview

    Stretch:(2.11.0+dfsg-2+b1) Jess:(2.9-3+b1) Java HDF Object viewer www
  • herisvm

    Stretch:(0.7.0-1) machine learning tools for classification algorithms www
  • herwig++-data

    Stretch:(2.6.0-1.1) Jess:(2.6.0-1) Herwig++ Data www
  • hfst

    Stretch:(3.10.0~r2798-3) Helsinki Finite-State Transducer Technology www
  • hfst-ospell

    Stretch:(0.4.0~r4643-4+b1) Spell checker library and tool based on HFST www
  • hhsuite-data

    Stretch:(3.0~beta2+dfsg-3) Jess:(2.0.16-5) sensitive protein sequence searching based on HMM-HMM alignment (data) www
  • hidrd

    Stretch & Jess:(0.2.0-11) tools for parsing and generating HID report descriptors www
  • hilive

    Stretch:(0.3-2) realtime alignment of Illumina reads www
  • hmmer

    Stretch:(3.1b2-1) Jess:(3.1b1-3) profile hidden Markov models for protein sequence analysis www
  • hmmer2

    Stretch:(2.3.2-13) Jess:(2.3.2-8) profile hidden Markov models for protein sequence analysis www
  • hmmer2-pvm

    Stretch:(2.3.2-13) Jess:(2.3.2-8) HMMER programs with PVM (Parallel Virtual Machine) support www
  • hodie

    Stretch & Jess:(1.5-2) prints the date in latin
  • hpcc

    Stretch:(1.4.3-1+b2) Jess:(1.4.1-3) HPC Challenge benchmark www
  • htcondor

    Stretch:(8.4.11~dfsg.1-1) Jess:(8.2.3~dfsg.1-6+rpi1) distributed workload management system www
  • htslib-test

    Stretch:(1.3.2-2+rpi1) Jess:(1.1-1) Test data for HTSlib www
  • hyantesite

    Stretch:(1.3.0-1.1) Jess:(1.3.0-1) geomatic tool to compute neighbourhood population potential www
  • hyphy-common

    Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (common files) www
  • hyphy-mpi

    Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (MPI version) www
  • hyphy-pt

    Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (pthreads version) www
  • hyphygui

    Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (GTK+ gui) www
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  • I

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  • idba

    Stretch & Jess:(1.1.2-1) iterative De Bruijn Graph De Novo short read assembler for transcriptome www
  • ifrit

    Stretch:(4.1.2-5+b3) Jess:(3.4.2-1) powerful tool for visualizing 3-dimensional data sets www
  • imagej

    Stretch:(1.51i+dfsg-2) Jess:(1.49i+dfsg-1) Image processing program inspired by NIH Image www
  • imagevis3d

    Stretch:(3.1.0-5) Jess:(3.1.0-4) desktop volume rendering application for large data www
  • imview

    Stretch:(1.1.9c-17+b1) Jess:(1.1.9c-12+b1) Image viewing and analysis application www
  • indelible

    Stretch:(1.03-2) powerful and flexible simulator of biological evolution www
  • indigo-utils

    Stretch:(1.1.12-2) Jess:(1.1.12-1) Organic Chemistry Toolkit Utilities www
  • infernal

    Stretch & Jess:(1.0.2-2) inference of RNA secondary structural alignments www
  • ipig

    Stretch:(0.0.r5-2) Jess:(0.0.r5-1) integrating PSMs into genome browser visualisations www
  • irstlm

    Stretch:(6.00.05-2) IRST Language Modeling Toolkit www
  • itksnap

    Stretch & Jess:(2.2.0-1.1) semi-automatic segmentation of structures in 3D images www
  • iva

    Stretch:(1.0.8+ds-1) iterative virus sequence assembler www
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  • J

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  • jaligner

    Stretch:(1.0+dfsg-4) Smith-Waterman algorithm with Gotoh's improvement www
  • jalview

    Stretch:(2.7.dfsg-5) Jess:(2.7.dfsg-4) multiple alignment editor www
  • jblas

    Stretch:(1.2.3-6) Jess:(1.2.3-5) fast linear algebra library for Java www
  • jemboss

    Stretch:(6.6.0+dfsg-6) Jess:(6.6.0+dfsg-1) graphical user interface to EMBOSS www
  • jmodeltest

    Stretch:(2.1.10+dfsg-5) HPC selection of models of nucleotide substitution www
  • jmol

    Stretch:(14.6.4+2016.11.05+dfsg1-3) Jess:(12.2.32+dfsg2-1) Molecular Viewer www
  • jsamp

    Stretch:(1.3.5-1) Java Simple Application Messaging Protocol tool for VO www
  • julia-common

    Stretch:(0.4.7-6) high-performance programming language for technical computing (common files) www
  • julia-factcheck

    Stretch & Jess:(0.1.2-2) Midje-like testing for Julia www
  • jupyter-notebook

    Stretch:(4.2.3-4) Jupyter interactive notebook www
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  • K

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  • kalign

    Stretch:(1:2.03+20110620-3) Jess:(1:2.03+20110620-2) Global and progressive multiple sequence alignment www
  • kalzium

    Stretch:(4:16.08.3-1) Jess:(4:4.14.2-1) periodic table and chemistry tools www
  • kalzium-data

    Stretch:(4:16.08.3-1) Jess:(4:4.14.2-1) data files for Kalzium www
  • khmer-common

    Stretch:(2.0+dfsg-10) common files for the khmer project tools www
  • kineticstools

    Stretch:(0.6.1+20161222-1) detection of DNA modifications www
  • kineticstools-data

    Stretch:(0.6.1+20161222-1) detection of DNA modifications -- data files www
  • king-probe

    Stretch:(2.13.110909-2) Evaluate and visualize protein interatomic packing www
  • kissplice

    Stretch & Jess:(2.1.0-1) Detection of various kinds of polymorphisms in RNA-seq data www
  • klustakwik

    Stretch & Jess:(2.0.1-1) automatic sorting of the samples (spikes) into clusters www
  • kmc

    Stretch:(2.3+dfsg-5) count kmers in genomic sequences www
  • kmer

    Stretch:(0~20150903+r2013-3) suite of tools for DNA sequence analysis www
  • konclude

    Stretch:(0.6.2~dfsg-3) tableau-based description logic reasoner for the semantic web www
  • kraken

    Stretch:(0.10.5~beta-2) assigning taxonomic labels to short DNA sequences www
  • kst

    Stretch:(2.0.3-5+b3) Jess:(2.0.3-3) scientific data plotting tool www
  • kst-data

    Stretch:(2.0.3-5) Jess:(2.0.3-3) set of data files for kst www
  • kstars

    Stretch:(4:16.08.3-2) Jess:(4:4.14.2-1) desktop planetarium for KDE www
  • kstars-data

    Stretch:(4:16.08.3-2) Jess:(4:4.14.2-1) data files for KStars desktop planetarium www
  • kxterm

    Stretch:(20061220+dfsg3-4.3) Jess:(20061220+dfsg3-4.1) CERNLIB data analysis suite - KUIP terminal emulator www
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  • L

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  • lambda-align

    Stretch:(1.0.1-2) Local Aligner for Massive Biological DatA www
  • lammps

    Stretch:(0~20161109.git9806da6-7) Jess:(0~20140523.gite5e877d-1) Molecular Dynamics Simulator www
  • last-align

    Stretch:(830-1) Jess:(490-1) genome-scale comparison of biological sequences www
  • lbt

    Stretch:(1.2.2-6) Jess:(1.2.2-5) converts from LTL formulas to Büchi automata www
  • leaff

    Stretch:(0~20150903+r2013-3+b2) biological sequence library utilities and applications www
  • lefse

    Stretch:(1.0+20160802-1) determine features of organisms, clades, taxonomic units, genes www
  • lhapdf-pdfsets-minimal

    Stretch:(5.9.1-5) Jess:(5.9.1-3) Minimal PDF Sets of LHAPDF www
  • libadios-bin

    Stretch:(1.11.0-1+b1) Jess:(1.7.0-4) ADIOS Adaptable IO system for simulations - binaries www
  • libapertium3-3.4-0

    Stretch:(3.4.0~r61013-5) Shared library for Apertium www
  • libball1.4-data

    Stretch:(1.4.3~beta1-3) Jess:(1.4.2+20140406-1) Biochemical Algorithms Library (data files) www
  • libcassie1v5

    Stretch:(1.0.5-1) library implementating search algorithms www
  • libcg3-0

    Stretch:(0.9.9~r11624-1+b1) Runtime for CG-3 www
  • libclhep2.1v5

    Stretch:(2.1.4.1+dfsg-1) CLHEP: A Class Library for High Energy Physics www
  • libclinica0

    Stretch & Jess:(0.3.0-1) Simple medical records manager (shared library) www
  • libcollada-dom2.4-dp0

    Stretch:(2.4.4+ds1-2) collada-dom 2.4.0 - COLLADA using double precision www
  • libdynamicedt3d1.8

    Stretch:(1.8.1+dfsg-1) Incrementally updatable Euclidean distance transform library www
  • libeccodes-data

    Stretch:(2.0.2-5) GRIB and BUFR enecoding/encoding software library - data www
  • libej0

    Stretch:(4.2.1+dfsg-1) Jess:(3.2.0-1) hardware & software framework for developing science experiments www
  • libgfsgl0

    Stretch:(20121130+dfsg-4) Jess:(20121130+dfsg-1+b1) graphical viewer for Gerris simulation files. Shared library www
  • libghemical-data

    Stretch:(3.0.0-4.1) Jess:(3.0.0-2) Molecular Modelling Library (data files) www
  • libgnuradio-fcdproplus3.7.10

    Stretch:(3.7.25.4b6464b-2) Funcube Dongle Pro Plus controller for GNU Radio (runtime) www
  • libgrib-api-data

    Stretch & Jess:(1.8.0.1-1) grib_api definition files www
  • libgrits5

    Stretch:(0.8.1-2) Jess:(0.8.1-1) Grits is a Virtual Globe library www
  • libgtkdatabox-0.9.3-0-glade

    Stretch:(1:0.9.3.0+dfsg-3) Gtk+ library to display large amounts of numerical data (glade API) www
  • libgtkdatabox-0.9.3-0-libglade

    Stretch:(1:0.9.3.0+dfsg-3) Gtk+ library to display large amounts of numerical data (glade lib) www
  • libgyoto6

    Stretch:(1.2.0-2) Gyoto framework main library an standard plug-in www
  • libhdf5-jni

    Stretch:(1.10.0-patch1+docs-3) native library used by libhdf5-java www
  • libhfst45

    Stretch:(3.10.0~r2798-3) Helsinki Finite-State Transducer Technology Libraries www
  • libhfstospell5

    Stretch:(0.4.0~r4643-4+b1) HFST spell checker runtime libraries www
  • libkst2core2

    Stretch:(2.0.3-5+b3) Jess:(2.0.3-3) kst core library www
  • libkst2math2

    Stretch:(2.0.3-5+b3) Jess:(2.0.3-3) kst math library www
  • libkst2widgets2

    Stretch:(2.0.3-5+b3) Jess:(2.0.3-3) kst widgets library www
  • liblas-bin

    Stretch:(1.8.1-3) Jess:(1.8.0-1) ASPRS LiDAR data translation toolset www
  • liblemon-utils

    Stretch:(1.3.1+dfsg-1) Library for Efficient Modeling and Optimization in Networks (utilities) www
  • libliggghts3

    Stretch:(3.5.0+repack1-10) Jess:(3.0.3+repack-2) Open Source DEM Particle Simulation Software. Shared library www
  • liblinear-tools

    Stretch:(2.1.0+dfsg-2) Jess:(1.8+dfsg-4) Standalone applications for LIBLINEAR www
  • liblorene-debian1

    Stretch:(0.0.0~cvs20161116+dfsg-1) liblorene shared library www
  • liblorene-export-debian0

    Stretch:(0.0.0~cvs20161116+dfsg-1) liblorene_export shared library www
  • liblorenef77-debian1

    Stretch:(0.0.0~cvs20161116+dfsg-1) liblorenef77 shared library www
  • liblttoolbox3-3.3-0v5

    Stretch:(3.3.3~r68466-2) Shared library for lttoolbox www
  • libmed-tools

    Stretch:(3.0.6-11) Jess:(3.0.6-7) Runtime tools to handle MED files www
  • libncarg-bin

    Stretch:(6.3.0-13) Jess:(6.2.0-3+b1) NCAR command-language library - development tools www
  • libncarg-data

    Stretch:(6.3.0-13) Jess:(6.2.0-3) NCAR command-language library - Data www
  • libngram-tools

    Stretch:(1.3.0-1) OpenGRM n-gram Language Modeling toolkit www
  • libocas-tools

    Stretch:(0.97+dfsg-3) Jess:(0.97-1) Standalone applications implementing the OCAS solver www
  • liboctomap1.8

    Stretch:(1.8.1+dfsg-1) 3D occupancy grid mapping approach library for mapping www
  • libopenfoam

    Stretch:(4.1+dfsg1-1) Set of programs for Computational Fluid Dynamics (CFD). Libraries www
  • libopengm-bin

    Stretch:(2.3.6+20160905-1+b1) command line tools for OpenGM www
  • libpwiz-tools

    Stretch:(3.0.9393-1+b1) Jess:(3.0.6585-2) ProteoWizard command line tools www
  • libqgis-customwidgets

    Stretch:(2.14.11+dfsg-3+deb9u1) QGIS custom widgets for Qt Designer www
  • libqgis-server2.14.11

    Stretch:(2.14.11+dfsg-3+deb9u1) QGIS - shared server library www
  • librasterlite2-1

    Stretch:(1.0.0~rc0+devel1-4) library for huge raster coverages using a SpatiaLite DBMS www
  • librsl1

    Stretch:(1.43-1.1) Jess:(1.43-1) TRMM Radar Software Library www
  • libsilo-bin

    Stretch:(4.10.2-6+b2) Jess:(4.9.1-3+b1) Utilities to manipulate libsilo files www
  • libsimgrid3.14

    Stretch:(3.14.159-2) Toolkit for scalable simulation of distributed applications www
  • libstxxl1v5

    Stretch:(1.4.1-2) C++ Standard Template Library for extra large datasets www
  • libxy-bin

    Stretch:(1.3-1.1) Jess:(1.3-1) xylib - utilities www
  • liggghts

    Stretch:(3.5.0+repack1-10) Jess:(3.0.3+repack-2) Open Source DEM Particle Simulation Software. www
  • limereg

    Stretch:(1.4.0-2) Lightweight Image Registration www
  • litl-tools

    Stretch:(0.1.8-2) Jess:(0.1.5+dfsg-2) Lightweight Trace Library - tools www
  • logcentral

    Stretch:(2.7-1.1) Jess:(2.7-1) Logging service for distributed applications www
  • logcentral-tools

    Stretch:(2.7-1.1) Jess:(2.7-1) Logging service for distributed applications www
  • logol

    Stretch:(1.7.5-1) Jess:(1.7.0-2) Pattern matching tool using Logol language www
  • logol-bin

    Stretch:(1.7.5-1) Jess:(1.7.0-2) Pattern matching tool using Logol language www
  • loki

    Stretch:(2.4.7.4-6) Jess:(2.4.7.4-5) MCMC linkage analysis on general pedigrees
  • looptools

    Stretch & Jess:(2.8-1) Integral Evaluator of One-loop Feynman Diagram www
  • lorene

    Stretch:(0.0.0~cvs20161116+dfsg-1) framework for numerical relativity www
  • lorene-codes-src

    Stretch:(0.0.0~cvs20161116+dfsg-1) source files of LORENE-based codes www
  • ltrsift

    Stretch:(1.0.2-7) Jess:(1.0.2-1) postprocessing and classification of LTR retrotransposons www
  • ltrsift-examples

    Stretch:(1.0.2-7) Jess:(1.0.2-1) example data for LTRsift www
  • lttoolbox

    Stretch:(3.3.3~r68466-2) Jess:(3.1.0-1.2) Apertium lexical processing modules and tools www
  • lttoolbox-dev

    Stretch:(3.3.3~r68466-2) Development tools and library for lttoolbox www
  • lutefisk

    Stretch & Jess:(1.0.7+dfsg-4) de novo interpretation of peptide CID spectra www
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  • macs

    Stretch:(2.1.1.20160309-1) Jess:(2.0.9.1-1) Model-based Analysis of ChIP-Seq on short reads sequencers www
  • macsyfinder

    Stretch:(1.0.2-3) detection of macromolecular systems in protein datasets www
  • maffilter

    Stretch:(1.1.0-1+dfsg-2+b1) process genome alignment in the Multiple Alignment Format www
  • maffilter-examples

    Stretch:(1.1.0-1+dfsg-2) process genome alignment in the Multiple Alignment Format (example data) www
  • mafft

    Stretch:(7.307-1) Jess:(7.205-1) Multiple alignment program for amino acid or nucleotide sequences www
  • magics++

    Stretch:(2.30.0-5) Jess:(2.22.7.dfsg.1-4) Executables for the magics++ library www
  • mapdamage

    Stretch:(2.0.6+dfsg-2) tracking and quantifying damage patterns in ancient DNA sequences www
  • mapsembler2

    Stretch:(2.2.3+dfsg-3+b1) Jess:(2.1.6+dfsg-1) bioinformatics targeted assembly software www
  • maq

    Stretch:(0.7.1-7) Jess:(0.7.1-5) maps short fixed-length polymorphic DNA sequence reads to reference sequences www
  • maqview

    Stretch:(0.2.5-7) Jess:(0.2.5-6) graphical read alignment viewer for short gene sequences www
  • mash

    Stretch:(1.1.1-2) fast genome and metagenome distance estimation using MinHash www
  • massxpert

    Stretch:(3.6.1-1) Jess:(3.4.1-1) linear polymer mass spectrometry software www
  • massxpert-data

    Stretch:(3.6.1-1) Jess:(3.4.1-1) linear polymer mass spectrometry software - arch-indep data www
  • maude

    Stretch:(2.7-2) Jess:(2.6-6) high-performance logical framework www
  • mauve-aligner

    Stretch:(2.4.0+4734-3) multiple genome alignment www
  • mayavi2

    Stretch:(4.5.0-1) Jess:(4.3.1-3.1) scientific visualization package for 2-D and 3-D data www
  • mbt

    Stretch:(3.2.16-1) Jess:(3.2.10-4) memory-based tagger-generator and tagger www
  • mbtserver

    Stretch:(0.11-1) Jess:(0.7-3) Server extensions for the MBT tagger www
  • meep

    Stretch:(1.3-4+b1) Jess:(1.2.1-2+b1) software package for FDTD simulation www
  • meep-lam4

    Stretch:(1.3-2+b1) Jess:(1.2.1-3+b1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-mpi-default

    Stretch:(1.3-3+b3) Jess:(1.2.1-2+b1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-mpich2

    Stretch:(1.3-4+b1) Jess:(1.2.1-3+b1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-openmpi

    Stretch:(1.3-3+b3) Jess:(1.2.1-2+b1) software package for FDTD simulation, parallel (OpenMPI) version www
  • melting

    Stretch:(4.3.1+dfsg-2) Jess:(4.3.1+dfsg-1) compute the melting temperature of nucleic acid duplex www
  • melting-gui

    Stretch:(4.3.1+dfsg-2) Jess:(4.3.1+dfsg-1) graphical interface to compute the melting temperature of nucleic acid duplex www
  • merkaartor

    Stretch:(0.18.3+ds-1+b1) Jess:(0.18.1-3+b5) map editor for OpenStreetMap.org www
  • meryl

    Stretch:(0~20150903+r2013-3+b2) in- and out-of-core kmer counting and utilities www
  • metaphlan2

    Stretch:(2.6.0+ds-2) Metagenomic Phylogenetic Analysis www
  • metaphlan2-data

    Stretch:(2.6.0+ds-2) data package for Metagenomic Phylogenetic Analysis www
  • metastudent

    Stretch:(2.0.1-4) Jess:(1.0.11-2) predictor of Gene Ontology terms from protein sequence www
  • metastudent-data

    Stretch:(2.0.1-2) Jess:(1.0.1-2) predictor of Gene Ontology terms from protein sequence - data files www
  • metastudent-data-2

    Stretch:(1.0.0-2) Jess:(1.0.0-1) predictor of Gene Ontology terms from protein sequence - data #2 www
  • metview

    Stretch:(4.8.0-4) Jess:(4.4.8+dfsg.1-8) Interactive data visualization and analysis environment, www
  • metview-data

    Stretch:(4.8.0-4) Jess:(4.4.8+dfsg.1-8) Data needed for the Metview data analysis environment www
  • mhap

    Stretch:(2.1.1+dfsg-1) locality-sensitive hashing to detect long-read overlaps www
  • mia-doctools

    Stretch:(2.4.3-5) Helper scripts for run-time document creation www
  • mia-tools

    Stretch:(2.4.3-5) Command line tools for gray scale image processing www
  • mia-viewit

    Stretch:(1.0.4-1) Viewer program for 3D data sets created by using MIA www
  • mialmpick

    Stretch:(0.2.13-1) Jess:(0.2.10-2) Tools for landmark picking in 3D volume data sets www
  • microbegps

    Stretch:(1.0.0-2) explorative taxonomic profiling tool for metagenomic data www
  • microbiomeutil

    Stretch:(20101212+dfsg1-1) Jess:(20101212+dfsg-1) Microbiome Analysis Utilities www
  • microbiomeutil-data

    Stretch:(20101212+dfsg1-1) Jess:(20101212+dfsg-1) Reference 16S sequences and NAST-alignments used by microbiomeutil tools www
  • microhope

    Stretch:(4.2.1+dfsg-1) Jess:(3.2.0-1) hardware & software framework to learn microcontrollers www
  • minc-tools

    Stretch:(2.3.00+dfsg-1.1+b1) Jess:(2.2.00-6) MNI medical image format tools www
  • minia

    Stretch:(1.6906-1) Jess:(1.6088-1) short-read biological sequence assembler www
  • miniasm

    Stretch:(0.2+dfsg-2) ultrafast de novo assembler for long noisy DNA sequencing reads www
  • minimap

    Stretch:(0.2-3) tool for approximate mapping of long biosequences such as DNA reads www
  • minisat

    Stretch & Jess:(1:2.2.1-5) Fast and lightweight SAT solver www
  • minisat+

    Stretch:(1.0-3) Jess:(1.0-2) solver for pseudo-Boolean constraints www
  • mipe

    Stretch:(1.1-5) Jess:(1.1-4) Tools to store PCR-derived data www
  • mira-assembler

    Stretch:(4.9.6-2) Jess:(4.0.2-1) Whole Genome Shotgun and EST Sequence Assembler www
  • mira-rfam-12s-rrna

    Stretch:(4.9.6-2) extract of RFAM 12 rRNA database www
  • missfits

    Stretch:(2.8.0-1) Basic maintenance and packaging tasks on FITS files www
  • mitools

    Stretch:(2.0.2-0.3+rpi1) Jess:(1.8.8-1) view, convert and perform basic maths with medical image datasets www
  • mldemos

    Stretch:(0.5.1-3+b2) Jess:(0.5.1-3) Machine Learning Demos (MLDemos) with Visualization www
  • mlpack-bin

    Stretch:(2.1.1-1) Jess:(1.0.10-1) intuitive, fast, scalable C++ machine learning library (binaries) www
  • mlv-smile

    Stretch:(1.47-4) Jess:(1.47-3) Find statistically significant patterns in sequences www
  • mmass

    Stretch:(5.5.0-5) Jess:(5.5.0-4) Mass spectrometry tool for proteomics www
  • mmass-modules

    Stretch:(5.5.0-5) Jess:(5.5.0-4) Mass spectrometry tool for proteomics - extension modules www
  • mobyle

    Stretch:(1.5.5+dfsg-2) Jess:(1.5.3+dfsg-1) Web portal that provides web forms for command-line software www
  • mobyle-programs

    Stretch & Jess:(5.1.2-1) Program descriptions for the mobyle portal www
  • mobyle-tutorials

    Stretch:(1.5.0-2) Jess:(1.5.0-1) program tutorials for the mobyle portal www
  • mobyle-utils

    Stretch:(1.5.5+dfsg-2) Jess:(1.5.3+dfsg-1) binary tools used by Mobyle www
  • mocassin

    Stretch:(2.02.72-2) MOnte CArlo SimulationS of Ionised Nebulae www
  • mocassin-benchmarks

    Stretch:(2.02.72-2) benchmarks for the photoionisation code MOCASSIN www
  • mocassin-data

    Stretch:(2.02.72-2) atomic and optical data for the photoionisation code MOCASSIN www
  • mocassin-examples

    Stretch:(2.02.72-2) Examples for the photoionisation code MOCASSIN www
  • molds

    Stretch:(0.3.1-1+b2) Jess:(0.3.1-1) Semi-empirical electronic structure and molecular dynamics www
  • mona

    Stretch:(1.4-17-1) Jess:(1.4-15-1) theorem prover based on automata www
  • montage

    Stretch:(4.0+dfsg-3+b3) Toolkit for assembling FITS images into mosaics www
  • montage-gridtools

    Stretch:(4.0+dfsg-3+b3) Create files to run montage on the grid www
  • montecarlo-base

    Stretch:(20061220+dfsg3-3.1) Jess:(20061220+dfsg3-3) [Physics] Common files for CERNLIB Monte Carlo libraries www
  • montecarlo-data

    Stretch:(20061220+dfsg3-3.1) Jess:(20061220+dfsg3-3) [Physics] data for CERNLIB Monte Carlo libraries www
  • mopac7-bin

    Stretch & Jess:(1.15-6) Semi-empirical Quantum Chemistry Library (binaries) www
  • morse-simulator

    Stretch:(1.4-2+b3) Jess:(1.2.1-2) Multi-OpenRobot Simulation Engine www
  • morse-simulator-data

    Stretch:(1.4-2) Jess:(1.2.1-2) Multi-OpenRobot Simulation Engine www
  • mothur

    Stretch:(1.38.1.1-1) Jess:(1.33.3+dfsg-2) sequence analysis suite for research on microbiota www
  • mothur-mpi

    Stretch:(1.38.1.1-1) Jess:(1.33.3+dfsg-2) mpi-enabled binary for mothur www
  • mozilla-biofox

    Stretch & Jess:(1.6-1) extension of bioinformatics tools to Iceape and Iceweasel browsers www
  • mpb

    Stretch:(1.5-2+b5) Jess:(1.5-2+b1) MIT Photonic-Bands www
  • mpb-mpi

    Stretch:(1.5-2+b5) Jess:(1.5-2+b1) MIT Photonic-Bands, parallel (mpich) version www
  • mpb-scm

    Stretch & Jess:(1.5-2) MIT Photonic-Bands initialisation files www
  • mpqc

    Stretch:(2.3.1-18) Jess:(2.3.1-16) Massively Parallel Quantum Chemistry Program www
  • mpqc-openmpi

    Stretch:(2.3.1-18) Jess:(2.3.1-16) Massively Parallel Quantum Chemistry Program (OpenMPI transitional package) www
  • mpqc-support

    Stretch:(2.3.1-18) Jess:(2.3.1-16) Massively Parallel Quantum Chemistry Program (support tools) www
  • mpqc3

    Stretch:(0.0~git20160216-7) Massively Parallel Quantum Chemistry Program www
  • mpqc3-data

    Stretch:(0.0~git20160216-7) Massively Parallel Quantum Chemistry Program (data files) www
  • mrbayes

    Stretch:(3.2.6+dfsg-1+b2) Jess:(3.2.3+dfsg-1) Bayesian Inference of Phylogeny www
  • mrbayes-mpi

    Stretch:(3.2.6+dfsg-1+b2) Jess:(3.2.3+dfsg-1) Bayesian Inference of Phylogeny - mpi version www
  • mriconvert

    Stretch:(1:2.1.0-1) Jess:(1:2.0.7-2) medical image file conversion utility www
  • mricron

    Stretch:(0.20140804.1~dfsg.1-2) Jess:(0.20140804.1~dfsg.1-1) magnetic resonance image conversion, viewing and analysis www
  • mricron-data

    Stretch:(0.20140804.1~dfsg.1-2) Jess:(0.20140804.1~dfsg.1-1) data files for MRIcron www
  • mrpt-apps

    Stretch:(1:1.4.0-7) Jess:(1:1.2.2-1.1) Mobile Robot Programming Toolkit - Console and GUI applications www
  • mrpt-common

    Stretch:(1:1.4.0-7) Mobile Robot Programming Toolkit - Example datasets and files www
  • mrtrix

    Stretch:(0.2.12-2) Jess:(0.2.12-1) diffusion-weighted MRI white matter tractography www
  • mummer

    Stretch:(3.23+dfsg-2) Jess:(3.23~dfsg-2) Efficient sequence alignment of full genomes www
  • munipack

    Stretch:(0.5.7-2) Astronomical photometry software package www
  • munipack-cli

    Stretch:(0.5.7-2) Command line interface of Munipack www
  • munipack-core

    Stretch:(0.5.7-2) Core routines of Munipack www
  • munipack-gui

    Stretch:(0.5.7-2) Graphical user interface of Munipack www
  • murasaki

    Stretch:(1.68.6-6+b3) homology detection tool across multiple large genomes www
  • murasaki-common

    Stretch:(1.68.6-6) homology detection tool across multiple large genomes (common files) www
  • murasaki-mpi

    Stretch:(1.68.6-6+b3) homology detection tool across multiple large genomes (MPI-version) www
  • muscle

    Stretch:(1:3.8.31+dfsg-2) Jess:(1:3.8.31-1) Multiple alignment program of protein sequences www
  • music-bin

    Stretch:(1.0.7-1.3) Jess:(1.0.7-1.2+b1) Multi-Simulation Coordinator for MPI -- Utilities www
  • mustang

    Stretch:(3.2.3-1) Jess:(3.2.2-1) multiple structural alignment of proteins www
  • mustang-testdata

    Stretch:(3.2.3-1) Jess:(3.2.2-1) multiple structural alignment of proteins, test data www
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  • nanopolish

    Stretch:(0.5.0-1+b1) consensus caller for nanopore sequencing data www
  • nast-ier

    Stretch:(20101212+dfsg1-1) Jess:(20101212+dfsg-1) NAST-based DNA alignment tool www
  • nautic

    Stretch:(1.5-1.1+b1) Jess:(1.5-1.1) computation of observer position in astro-navigation www
  • ncbi-blast+

    Stretch:(2.6.0-1) Jess:(2.2.29-3) next generation suite of BLAST sequence search tools www
  • ncbi-blast+-legacy

    Stretch:(2.6.0-1) Jess:(2.2.29-3) NCBI Blast legacy call script www
  • ncbi-entrez-direct

    Stretch:(6.10.20170123+ds-1) NCBI Entrez utilities on the command line www
  • ncbi-epcr

    Stretch:(2.3.12-1-4) Jess:(2.3.12-1-2) Tool to test a DNA sequence for the presence of sequence tagged sites www
  • ncbi-rrna-data

    Stretch:(6.1.20170106-2) Jess:(6.1.20120620-8) large rRNA BLAST databases distributed with the NCBI toolkit www
  • ncbi-seg

    Stretch:(0.0.20000620-3) Jess:(0.0.20000620-2) tool to mask segments of low compositional complexity in amino acid sequences www
  • ncbi-tools-bin

    Stretch:(6.1.20170106-2) Jess:(6.1.20120620-8) NCBI libraries for biology applications (text-based utilities) www
  • ncbi-tools-x11

    Stretch:(6.1.20170106-2) Jess:(6.1.20120620-8) NCBI libraries for biology applications (X-based utilities) www
  • ncl-ncarg

    Stretch:(6.3.0-13) Jess:(6.2.0-3+b1) NCAR Command Language and NCAR graphics www
  • ncl-tools

    Stretch:(2.1.18+dfsg-2) tools to deal with NEXUS files www
  • nco

    Stretch:(4.6.3-1) Jess:(4.4.2-1) Command-line operators to analyze netCDF files www
  • ncoils

    Stretch & Jess:(2002-4) coiled coil secondary structure prediction www
  • ncview

    Stretch:(2.1.7+ds-1+b1) Jess:(1.93g-1) X11 visual browser for NetCDF format files www
  • neat

    Stretch:(2.0-2) Nebular Empirical Analysis Tool www
  • neobio

    Stretch:(0.0.20030929-2) Jess:(0.0.20030929-1.1) computes alignments of amino acid and nucleotide sequences www
  • netcdf-bin

    Stretch:(1:4.4.1.1-2) Jess:(1:4.1.3-7.2) Programs for reading and writing NetCDF files www
  • neurodebian

    Stretch:(0.37.6) neuroscience-oriented distribution - repository configuration www
  • neurodebian-archive-keyring

    Stretch:(0.37.6) neuroscience-oriented distribution - GnuPG archive keys www
  • neurodebian-desktop

    Stretch:(0.37.6) neuroscience-oriented distribution - desktop integration www
  • neurodebian-dev

    Stretch:(0.37.6) neuroscience-oriented distribution - development tools www
  • neurodebian-popularity-contest

    Stretch:(0.37.6) neuroscience-oriented distribution - popcon integration www
  • nexus-tools

    Stretch:(4.3.2-svn1921-5) Jess:(4.3.2-svn1921-2+b1) NeXus scientific data file format - applications www
  • nifti2dicom-data

    Stretch:(0.4.11-1) Jess:(0.4.9-1) data files for nifti2dicom www
  • njplot

    Stretch:(2.4-7) Jess:(2.4-2) phylogenetic tree drawing program www
  • node-sphericalmercator

    Stretch & Jess:(1.0.1-2) Spherical Mercator projection support for NodeJS www
  • node-srs

    Stretch:(0.4.8+dfsg-3) Jess:(0.3.2+ds1-1+b1) spatial reference library for Node.js www
  • norsnet

    Stretch:(1.0.17-2) Jess:(1.0.17-1) tool to identify unstructured loops in proteins www
  • norsp

    Stretch:(1.0.6-2) Jess:(1.0.6-1) predictor of non-regular secondary structure www
  • numdiff

    Stretch:(5.8.1-2) Jess:(5.8.1-1) Compare similar files with numeric fields www
  • nutsqlite

    Stretch:(1.9.9.3-2) Dietary nutrition analysis software www
  • nwchem

    Stretch:(6.6+r27746-2+b1) Jess:(6.5+r26243-4) High-performance computational chemistry software www
  • nwchem-data

    Stretch:(6.6+r27746-2) Jess:(6.5+r26243-4) High-performance computational chemistry software (data files) www
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  • oar-web-status

    Stretch:(2.5.7-3) Jess:(2.5.4-2+deb8u1) OAR batch scheduler visualization tool package www
  • obdgpslogger

    Stretch:(0.16-1.3) Jess:(0.16-1.2+b1) suite of tools to log OBDII and GPS data www
  • objcryst-fox

    Stretch:(1.9.6.0-2.1+b1) Jess:(1.9.6.0-2.1) Free Objects for Xtallography www
  • oce-draw

    Stretch:(0.17.2-2) Jess:(0.15-5) OpenCASCADE Community Edition CAE platform shared library www
  • octave-bart

    Stretch:(0.4.00-1) Octave bindings for BART www
  • octave-biosig

    Stretch:(1.3.0-2.2) Jess:(1.3.0-2+b2) Octave bindings for BioSig library www
  • octave-gdf

    Stretch:(0.1.2-2+b5) Jess:(0.1.2-2+b2) IO library for the GDF -- Octave interface www
  • octave-lhapdf

    Stretch:(5.9.1-5) Jess:(5.9.1-3+b1) Octave Bindings for LHAPDF www
  • octave-psychtoolbox-3

    Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) Jess:(3.0.11.20140816.dfsg1-1) toolbox for vision research -- Octave bindings www
  • octomap-tools

    Stretch:(1.8.1+dfsg-1) Jess:(1.6.8+dfsg-1) Tools for 3D occupancy grid mapping www
  • odil

    Stretch:(0.7.3-1) C++11 library for the DICOM standard (application) www
  • odin

    Stretch:(2.0.2-0.3+rpi1) Jess:(1.8.8-1) develop, simulate and run magnetic resonance sequences www
  • ogdi-bin

    Stretch:(3.2.0+ds-2) Jess:(3.2.0~beta2-7.1) Open Geographic Datastore Interface Library -- utilities www
  • openbabel

    Stretch:(2.3.2+dfsg-3) Jess:(2.3.2+dfsg-2) Chemical toolbox utilities (cli) www
  • openbabel-gui

    Stretch:(2.3.2+dfsg-3) Jess:(2.3.2+dfsg-2) Chemical toolbox utilities (graphical user interface) www
  • opencaster

    Stretch:(3.2.2+dfsg-1.1) Jess:(3.2.2+dfsg-1) MPEG2 transport stream data generator and packet manipulator www
  • openfoam

    Stretch:(4.1+dfsg1-1) Set of programs for Computational Fluid Dynamics (CFD). Binaries www
  • openfoam-examples

    Stretch:(4.1+dfsg1-1) Set of programs for Computational Fluid Dynamics (CFD). Examples www
  • openmolar

    Stretch:(1.0.15-gd81f9e5-1) Jess:(0.6.0-1) dental practice management software www
  • openms

    Stretch:(2.0.0-4) Jess:(1.11.1-5) package for LC/MS data management and analysis www
  • openms-common

    Stretch:(2.0.0-4) Jess:(1.11.1-5) package for LC/MS data management and analysis - shared data www
  • openmx

    Stretch:(3.7.6-1+b2) Jess:(3.7.6-1) package for nano-scale material simulations www
  • openmx-data

    Stretch & Jess:(3.7.6-1) package for nano-scale material simulations (data) www
  • openrocket

    Stretch:(15.03) Jess:(14.06) Model Rocket Simulator www
  • opensesame

    Stretch:(0.27.4-2.1) Jess:(0.27.4-2) graphical experiment builder for the social sciences www
  • openturns-examples

    Stretch:(1.7-3) Jess:(1.3-3) examples of OpenTURNS functionalities www
  • openturns-validation

    Stretch:(1.7-3) Jess:(1.3-3) validation files for OpenTURNS www
  • openuniverse

    Stretch:(1.0beta3.1+dfsg-6) Jess:(1.0beta3.1+dfsg-3) 3D Universe Simulator www
  • openuniverse-common

    Stretch:(1.0beta3.1+dfsg-6) Jess:(1.0beta3.1+dfsg-3) 3D Universe Simulator data files www
  • openwalnut-modules

    Stretch:(1.4.0~rc1+hg3a3147463ee2-1+rpi1) Jess:(1.4.0~rc1+hg3a3147463ee2-1) Loaders, algorithms and visualization modules for OpenWalnut www
  • openwalnut-qt4

    Stretch:(1.4.0~rc1+hg3a3147463ee2-1+rpi1) Jess:(1.4.0~rc1+hg3a3147463ee2-1) Qt based user interface for OpenWalnut www
  • opj2dat

    Stretch:(20080225-2.2) Jess:(20080225-2.1) OriginLab Origin project files to data files converter www
  • optgeo

    Stretch:(2.23-1) Jess:(2.21-3) simulator for geometrical optics www
  • opticalraytracer

    Stretch & Jess:(3.2-1.1) Virtual lens design workshop www
  • origami

    Stretch:(1.2.7+really0.7.4-1.1) Jess:(0.7.4-1) command-line management tool for Folding @ Home clients www
  • orthanc

    Stretch:(1.2.0+dfsg-1) Jess:(0.8.4+dfsg-1) Lightweight, RESTful DICOM server for medical imaging www
  • orthanc-dicomweb

    Stretch:(0.3+dfsg-1+b6) Plugin to extend Orthanc with support of WADO and DICOMweb www
  • orthanc-imagej

    Stretch:(1.1+dfsg-1) ImageJ plugin to import images from Orthanc www
  • orthanc-postgresql

    Stretch:(2.0-3) Plugins to use PostgreSQL as a database back-end to Orthanc www
  • orthanc-webviewer

    Stretch:(2.2-1+b6) Web viewer of medical images for Orthanc www
  • ossim-core

    Stretch:(1.8.20.3+ds-5+b1) Jess:(1.8.16-3) OSSIM core utilities www
  • otf-trace

    Stretch:(1.12.5+dfsg-2+b1) Jess:(1.12.5+dfsg-1) Open Trace Format support library - development files www
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  • p4vasp

    Stretch:(0.3.29+dfsg-3+b4) Jess:(0.3.29+dfsg-1) visualization suite for the Vienna Ab-initio Simulation Package (VASP) www
  • paje.app

    Stretch:(1.98-1+b4) Jess:(1.98-1+b3) generic visualization tool (Gantt chart and more)
  • paraclu

    Stretch & Jess:(9-1) Parametric clustering of genomic and transcriptomic features www
  • paraview

    Stretch:(5.1.2+dfsg1-2) Jess:(4.1.0+dfsg+1-1) Parallel Visualization Application www
  • parsinsert

    Stretch:(1.04-2) Jess:(1.04-1) Parsimonious Insertion of unclassified sequences into phylogenetic trees www
  • parsnp

    Stretch:(1.2+dfsg-3) rapid core genome multi-alignment www
  • paw

    Stretch:(1:2.14.04.dfsg.2-9.1) Jess:(1:2.14.04.dfsg.2-9+b1) Physics Analysis Workstation - a graphical analysis program www
  • paw++

    Stretch:(1:2.14.04.dfsg.2-9.1) Jess:(1:2.14.04.dfsg.2-9+b1) Physics Analysis Workstation (Lesstif-enhanced version) www
  • paw-common

    Stretch:(1:2.14.04.dfsg.2-9.1) Jess:(1:2.14.04.dfsg.2-9) Physics Analysis Workstation (common files) www
  • paw-demos

    Stretch:(1:2.14.04.dfsg.2-9.1) Jess:(1:2.14.04.dfsg.2-9) Physics Analysis Workstation examples and tests www
  • pbbamtools

    Stretch:(0.7.4+ds-1+rpi1) processing Pacific Biosciences binary alignment/map files www
  • pbbarcode

    Stretch:(0.8.0-4) annotate PacBio sequencing reads with barcode information www
  • pbdagcon

    Stretch:(0.3+20161121+ds-1) sequence consensus using directed acyclic graphs www
  • pbgenomicconsensus

    Stretch:(2.1.0-1) Pacific Biosciences variant and consensus caller www
  • pbh5tools

    Stretch:(0.8.0+dfsg-5) tools for manipulating Pacific Biosciences HDF5 files www
  • pbhoney

    Stretch:(15.8.24+dfsg-2) genomic structural variation discovery www
  • pbjelly

    Stretch:(15.8.24+dfsg-2) genome assembly upgrading tool www
  • pbsim

    Stretch:(1.0.3-2) simulator for PacBio sequencing reads www
  • pcl-tools

    Stretch:(1.8.0+dfsg1-3) Jess:(1.7.2-7) Point Cloud Library - point cloud processing tools www
  • pdb2pqr

    Stretch:(2.1.1+dfsg-2) Jess:(1.9.0+dfsg-1) Preparation of protein structures for electrostatics calculations www
  • pegasus-wms

    Stretch:(4.4.0+dfsg-6) Jess:(4.4.0+dfsg-4) Scientific workflow management system for HTCondor www
  • perlprimer

    Stretch:(1.2.3-1) Jess:(1.1.21-2) Graphical design of primers for PCR www
  • perm

    Stretch:(0.4.0-2) Jess:(0.4.0-1) efficient mapping of short reads with periodic spaced seeds www
  • phipack

    Stretch:(0.0.20160614-2) PHI test and other tests of recombination www
  • phybin

    Stretch:(0.3-1) binning/clustering newick trees by topology www
  • phylip

    Stretch:(1:3.696+dfsg-5) Jess:(1:3.696+dfsg-1) package of programs for inferring phylogenies www
  • phyml

    Stretch:(3:3.2.0+dfsg-7) Jess:(2:20120412-2) Phylogenetic estimation using Maximum Likelihood www
  • physamp

    Stretch:(0.2.0-1) sample sequence alignment according to its corresponding phylogenetic tree www
  • phyutility

    Stretch & Jess:(2.7.3-1) simple analyses or modifications on both phylogenetic trees and data matrices www
  • picard-tools

    Stretch:(2.8.1+dfsg-1) Jess:(1.113-1) Command line tools to manipulate SAM and BAM files www
  • picosat

    Stretch & Jess:(960-1) SAT solver with proof and core support www
  • piler

    Stretch:(0~20140707-1) genomic repeat analysis www
  • pirs

    Stretch:(2.0.2+dfsg-5.1+b1) Profile based Illumina pair-end Reads Simulator www
  • pirs-examples

    Stretch:(2.0.2+dfsg-5.1) profile basd Illumina pair-end Reads Simulator (example data) www
  • pirs-profiles

    Stretch:(2.0.2+dfsg-5.1) profile basd Illumina pair-end Reads Simulator (profile data) www
  • pktools

    Stretch:(2.6.7-3) Jess:(2.5.3-1+b1) GDAL add-on tools to perform useful raster processing www
  • placnet

    Stretch:(1.03-2) Plasmid Constellation Network project www
  • planets

    Stretch:(0.1.13-16) Jess:(0.1.13-14) Gravitation simulation of planetary bodies www
  • plast-example

    Stretch:(2.3.1+dfsg-4) Parallel Local Sequence Alignment Search Tool (example data) www
  • plink

    Stretch:(1.07-7) Jess:(1.07-3) whole-genome association analysis toolset www
  • plink1.9

    Stretch:(1.90~b3.45-170113-1) whole-genome association analysis toolset www
  • pnetcdf-bin

    Stretch:(1.7.0-1+b1) Programs for reading and writing parallel NetCDF files www
  • poa

    Stretch:(2.0+20060928-4) Jess:(2.0+20060928-3) Partial Order Alignment for multiple sequence alignment www
  • populations

    Stretch & Jess:(1.2.33+svn0120106-2.1) population genetic software www
  • poretools

    Stretch:(0.6.0+dfsg-2) toolkit for nanopore nucleotide sequencing data www
  • poretools-data

    Stretch:(0.6.0+dfsg-2) toolkit for nanopore nucleotide sequencing data -- sample datasets www
  • pp-popularity-contest

    Stretch:(1.0.6-2+b3) Jess:(1.0.6-2+b1) PredictProtein popularity contest www
  • pprepair

    Stretch:(0.0~20160321-87ffae5-1+b3) planar partition repair tool www
  • praat

    Stretch:(6.0.23-1) Jess:(5.4.0-1) program for speech analysis and synthesis www
  • prank

    Stretch:(0.0.150803-2) Jess:(0.0.140110-1) Probabilistic Alignment Kit for DNA, codon and amino-acid sequences www
  • predictnls

    Stretch:(1.0.20-3) Jess:(1.0.20-1) prediction and analysis of protein nuclear localization signals www
  • predictprotein

    Stretch:(1.1.07-2) Jess:(1.1.06-1) suite of protein sequence analysis tools www
  • prepair

    Stretch:(0.7-6+b4) polygon repair tool www
  • prepair-data

    Stretch:(0.7-6) polygon repair tool -- example data www
  • prime-phylo

    Stretch:(1.0.11-4+b1) Jess:(1.0.11-2) bayesian estimation of gene trees taking the species tree into account www
  • primer3

    Stretch:(2.3.7-3) Jess:(2.3.6-1) tool to design flanking oligo nucleotides for DNA amplification www
  • primer3-examples

    Stretch:(2.3.7-3) tool to design flanking oligo nucleotides for DNA amplification (examples) www
  • proalign

    Stretch:(0.603-2) Jess:(0.603-1) Probabilistic multiple alignment program www
  • probabel

    Stretch:(0.4.5-3) Jess:(0.4.3-2) Toolset for Genome-Wide Association Analysis www
  • probabel-examples

    Stretch:(0.4.5-3) Jess:(0.4.3-2) Example files for ProbABEL www
  • probalign

    Stretch:(1.4-5) Jess:(1.4-3) multiple sequence alignment using partition function posterior probabilities www
  • probcons

    Stretch:(1.12-11) Jess:(1.12-9) PROBabilistic CONSistency-based multiple sequence alignment www
  • probcons-extra

    Stretch:(1.12-11) Jess:(1.12-9) Extra programs from the probcons package www
  • proda

    Stretch:(1.0-10) Jess:(1.0-8) multiple alignment of protein sequences www
  • prodigal

    Stretch:(1:2.6.3-1) Jess:(1:2.6.1-1) Microbial (bacterial and archaeal) gene finding program www
  • profbval

    Stretch:(1.0.22-4) Jess:(1.0.22-1) predictor of flexible/rigid protein residues from sequence www
  • profisis

    Stretch:(1.0.11-3) Jess:(1.0.11-1) prediction of protein-protein interaction sites from sequence www
  • profnet-bval

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profbval www
  • profnet-chop

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profchop www
  • profnet-con

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profcon www
  • profnet-isis

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profisis www
  • profnet-md

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for metadisorder www
  • profnet-norsnet

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for norsnet www
  • profnet-prof

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profacc www
  • profnet-snapfun

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for snapfun www
  • profphd

    Stretch:(1.0.42-1) Jess:(1.0.40-1) secondary structure and solvent accessibility predictor www
  • profphd-net

    Stretch:(1.0.22-4) Jess:(1.0.22-2) neural network architecture for profphd www
  • profphd-utils

    Stretch:(1.0.10-3) Jess:(1.0.10-1) profphd helper utilities convert_seq and filter_hssp www
  • proftmb

    Stretch:(1.1.12-6) Jess:(1.1.12-2) per-residue prediction of bacterial transmembrane beta barrels www
  • progressivemauve

    Stretch:(1.2.0+4713-2) multiple genome alignment algorithms www
  • proj-bin

    Stretch:(4.9.3-1) Jess:(4.8.0-5) Cartographic projection library (tools) www
  • prooftree

    Stretch:(0.13-1) Jess:(0.12-1+b1) proof-tree visualization for Proof General www
  • proteinortho

    Stretch:(5.15+dfsg-1) Detection of (Co-)orthologs in large-scale protein analysis www
  • prottest

    Stretch:(3.4.2+dfsg-2) selection of best-fit models of protein evolution www
  • psfex

    Stretch:(3.17.1+dfsg-3+b1) Point Spread Function model extractor www
  • psi3

    Stretch:(3.4.0-6) Jess:(3.4.0-5) Quantum Chemical Program Suite www
  • psi4

    Stretch:(1:1.0-1+b1) Jess:(4.0~beta5+dfsg-2) Quantum Chemical Program Suite www
  • psi4-data

    Stretch:(1:1.0-1) Jess:(4.0~beta5+dfsg-2) Quantum Chemical Program Suite (data files) www
  • psychopy

    Stretch:(1.83.04.dfsg-2) Jess:(1.79.00+git16-g30c9343.dfsg-1.1) environment for creating psychology stimuli in Python www
  • psychtoolbox-3-common

    Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) Jess:(3.0.11.20140816.dfsg1-1) toolbox for vision research -- arch/interpreter independent part www
  • psychtoolbox-3-lib

    Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) Jess:(3.0.11.20140816.dfsg1-1) toolbox for vision research -- arch-specific parts www
  • purify

    Stretch:(2.0.0-1) Collection of routines for radio interferometric imaging www
  • pyfai

    Stretch:(0.13.0+dfsg-1) Jess:(0.10.2-1) Fast Azimuthal Integration scripts www
  • pyformex

    Stretch & Jess:(0.8.6-4) program to create 3D geometry from Python scripts. www
  • pyformex-lib

    Stretch & Jess:(0.8.6-4+b1) program to create 3D geometry from Python scripts. www
  • pyfr

    Stretch:(1.5.0-1) flux reconstruction in Python www
  • pymca

    Stretch:(5.1.3+dfsg-1) Jess:(4.7.4+dfsg-1) Applications and toolkit for X-ray fluorescence analysis -- scripts www
  • pymca-data

    Stretch:(5.1.3+dfsg-1) Jess:(4.7.4+dfsg-1) Architecture independent data files for PyMca www
  • pymoctool

    Stretch:(0.4.2-1) Python Multi-Order Coverage maps tool for Virtual Observatory www
  • pymol

    Stretch:(1.8.4.0+dfsg-1) Jess:(1.7.2.1-1) 100 ,Molecular Graphics System www
  • pymol-data

    Stretch:(1.8.4.0+dfsg-1) data files for PyMOL www
  • pythia8-data

    Stretch:(8.1.86-1.2) Jess:(8.1.86-1) PYTHIA8 data files www
  • python-drizzle-testdata

    Stretch:(1.3-2) Dithered image combination for Python (Test data) www
  • python-escript

    Stretch:(5.0-3) Escript/Finley finite elements Python2 system (with OpenMP) www
  • python-escript-doc

    Stretch:(5.0-3) Documentation for Escript/Finley www
  • python-escript-mpi

    Stretch:(5.0-3) Escript/Finley finite elements Python2 system (OpenMP + MPI) www
  • python-expyriment

    Stretch:(0.7.0+git34-g55a4e7e-3.2) Jess:(0.7.0+git34-g55a4e7e-3) Python library for cognitive and neuroscientific experiments www
  • python-pybigwig

    Stretch:(0.3.2-1) Python 2 module for quick access to bigBed and bigWig files www
  • python-pynlpl

    Stretch:(1.1.2-1) PyNLPl is a library for Natural Language Processing (Python 2 version) www
  • python-pyzolib

    Stretch:(0.3.4-1) Utilities for the Pyzo environment (Python 2) www
  • python3-escript

    Stretch:(5.0-3) Escript/Finley finite elements Python3 system (with OpenMP) www
  • python3-escript-mpi

    Stretch:(5.0-3) Escript/Finley finite elements Python3 system (OpenMP + MPI) www
  • python3-fitbitscraper

    Stretch & Jess:(0.1-1) Python library for scraping the FitBit website for data www
  • python3-morse-simulator

    Stretch:(1.4-2+b3) Jess:(1.2.1-2) Multi-OpenRobot Simulation Engine www
  • python3-pybigwig

    Stretch:(0.3.2-1) Python 3 module for quick access to bigBed and bigWig files www
  • python3-pynlpl

    Stretch:(1.1.2-1) PyNLPl is a library for Natural Language Processing (Python 3 version) www
  • python3-pyzolib

    Stretch:(0.3.4-1) Utilities for the Pyzo environment (Python 3) www
  • pyzo

    Stretch:(4.3.1-1) interactive editor for scientific Python www
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  • Q

  • Rate It
  • qfits-tools

    Stretch & Jess:(6.2.0-8) FITS manipulation tools www
  • qfitsview

    Stretch:(3.3+p1+dfsg-2) FITS file viewer based on DPUSER www
  • qgis

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) Geographic Information System (GIS) www
  • qgis-api-doc

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) QGIS API documentation www
  • qgis-common

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) QGIS - architecture-independent data www
  • qgis-plugin-grass

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) GRASS plugin for QGIS www
  • qgis-plugin-grass-common

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) GRASS plugin for QGIS - architecture-independent data www
  • qgis-provider-grass

    Stretch:(2.14.11+dfsg-3+deb9u1) GRASS provider for QGIS www
  • qgis-providers

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) collection of data providers to QGIS www
  • qgis-providers-common

    Stretch:(2.14.11+dfsg-3+deb9u1) Jess:(2.4.0-1) collection of data providers to QGIS - architecture-independent files www
  • qgis-server

    Stretch:(2.14.11+dfsg-3+deb9u1) QGIS server providing various OGC services www
  • qiime

    Stretch:(1.8.0+dfsg-4+b3) Jess:(1.8.0+dfsg-4+b1) Quantitative Insights Into Microbial Ecology www
  • qiime-data

    Stretch & Jess:(1.8.0+dfsg-4) Quantitative Insights Into Microbial Ecology (supporting data) www
  • qmapshack

    Stretch:(1.7.2-1) Jess:(0.6.0-1) GPS mapping (GeoTiff and vector) and GPSr management www
  • qmc

    Stretch:(0.94-3.1) Jess:(0.94-3) Quine McClusky Simplification Tool
  • qrisk2

    Stretch:(0.1.20150729-2) Jess:(0.0.r31-1) cardiovascular disease risk calculator www
  • qtdmm

    Stretch & Jess:(0.8.13-3) GUI for digital multimeter www
  • qthid-fcd-controller

    Stretch & Jess:(4.1-3) Funcube Dongle controller www
  • qtltools

    Stretch:(1.1+dfsg-1) Tool set for molecular QTL discovery and analysis www
  • quantum-espresso

    Stretch:(6.0-3) Jess:(5.1+dfsg-3) Electronic-Structure and Ab-Initio Molecular Dynamics Suite www
  • quantum-espresso-data

    Stretch:(6.0-3) Jess:(5.1+dfsg-3) Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation) www
  • quitcount

    Stretch:(3.1.3-3) Jess:(3.1.3-2) Small tool which may help yourself quit smoking www
  • qutemol

    Stretch:(0.4.1~cvs20081111-6+rpi1) Jess:(0.4.1~cvs20081111-3.2) interactive visualization of macromolecules www
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  • R

  • Rate It
  • rambo-k

    Stretch:(1.21+dfsg-1) Read Assignment Method Based On K-mers www
  • rasmol

    Stretch & Jess:(2.7.5.2-2) Visualize biological macromolecules www
  • raster3d

    Stretch:(3.0-3-2) Jess:(3.0-3-1) tools for generating images of proteins or other molecules www
  • rate4site

    Stretch:(3.0.0-4) Jess:(3.0.0-1) detector of conserved amino-acid sites www
  • rawtran

    Stretch:(0.3.8-2+b1) RAW photo to FITS converter www
  • ray

    Stretch:(2.3.1-4+b1) Jess:(2.3.1-1) de novo genome assemblies of next-gen sequencing data www
  • ray-extra

    Stretch:(2.3.1-4) Jess:(2.3.1-1) Scripts and XSL sheets for post-processing for ray www
  • rdkit-data

    Stretch:(201603.5-2) Jess:(201403-1) Collection of cheminformatics and machine-learning software (data files) www
  • rdp-classifier

    Stretch:(2.10.2-1) extensible sequence classifier for fungal lsu, bacterial and archaeal 16s www
  • readseq

    Stretch & Jess:(1-11) Conversion between sequence formats www
  • reapr

    Stretch:(1.0.18+dfsg-3) universal tool for genome assembly evaluation www
  • repeatmasker-recon

    Stretch:(1.08-3) finds repeat families from biological sequences www
  • reprof

    Stretch:(1.0.1-4) Jess:(1.0.1-1) protein secondary structure and accessibility predictor www
  • rivet

    Stretch:(1.8.3-2) Jess:(1.8.3-1.1) Robust Independent Validation of Experiment and Theory www
  • rivet-plugins-data

    Stretch:(1.8.3-2) Jess:(1.8.3-1.1) Data files of Rivet analysis plugins www
  • rivet-plugins-dev

    Stretch:(1.8.3-2) Jess:(1.8.3-1.1) Template generator of Rivet analysis plugin www
  • rna-star

    Stretch:(2.4.0k-1) ultrafast universal RNA-seq aligner www
  • rnahybrid

    Stretch:(2.1.2-1) Jess:(2.1.1-2) Fast and effective prediction of microRNA/target duplexes www
  • roary

    Stretch:(3.8.0+dfsg-1) high speed stand alone pan genome pipeline www
  • rsem

    Stretch:(1.2.31+dfsg-1) RNA-Seq by Expectation-Maximization www
  • rtax

    Stretch:(0.984-5) Jess:(0.984-2) Classification of sequence reads of 16S ribosomal RNA gene www
  • ruby-rgfa

    Stretch:(1.3.1-1) parse, edit and write GFA format graphs in Ruby www
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  • S

  • Rate It
  • saga

    Stretch:(2.3.1+dfsg-3) Jess:(2.1.2+dfsg-3) System for Automated Geoscientific Analyses www
  • saga-common

    Stretch:(2.3.1+dfsg-3) SAGA GIS architecture independent files www
  • saint

    Stretch:(2.5.0+dfsg-2) Jess:(2.4.0+dfsg-1) Significance Analysis of INTeractome www
  • samtools

    Stretch:(1.3.1-3) Jess:(0.1.19-1) processing sequence alignments in SAM and BAM formats www
  • samtools-test

    Stretch:(1.3.1-3) test files for the samtools package www
  • saods9

    Stretch:(7.5+repack1-2) Jess:(7.3.2+repack-1) Image display tool for astronomy www
  • saods9-tclpackages

    Stretch:(7.5+repack1-2) Tcl/Tk packages provided with DS9 www
  • sat4j

    Stretch:(2.3.5-0.2) Jess:(2.3.3-1) Efficient library of SAT solvers in Java www
  • savi

    Stretch:(1.5.0a-1) Jess:(1.4.6-1) satellite constellation visualisation www
  • sbmltoolbox

    Stretch:(4.1.0-3) Jess:(4.1.0-1) libsbml toolbox for octave and matlab www
  • scamp

    Stretch:(2.0.4-3) Compute astrometric and photometric solutions www
  • science-astronomy

    Stretch:(1.7) Jess:(1.4) Debian Science Astronomy transitional package www
  • science-astronomy-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Astronomy-dev transitional package www
  • science-biology

    Stretch:(1.7) Jess:(1.4) Debian Science Biology packages www
  • science-chemistry

    Stretch:(1.7) Jess:(1.4) Debian Science Chemistry packages www
  • science-config

    Stretch:(1.7) Jess:(1.4) Debian Science Project config package www
  • science-dataacquisition

    Stretch:(1.7) Jess:(1.4) Debian Science data acquisition packages www
  • science-dataacquisition-dev

    Stretch:(1.7) Jess:(1.4) Debian Science data acquisition development packages www
  • science-distributedcomputing

    Stretch:(1.7) Jess:(1.4) Debian Science Distributed Computing packages www
  • science-economics

    Stretch:(1.7) Jess:(1.4) Debian Science Economics packages www
  • science-electronics

    Stretch:(1.7) Jess:(1.4) Debian Science Electronics packages www
  • science-electrophysiology

    Stretch:(1.7) Jess:(1.4) Debian Science packages for Electrophysiology www
  • science-engineering

    Stretch:(1.7) Jess:(1.4) Debian Science Engineering packages www
  • science-engineering-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Engineering-dev packages www
  • science-financial

    Stretch:(1.7) Jess:(1.4) Debian Science financial engineering and computational finance www
  • science-geography

    Stretch:(1.7) Jess:(1.4) Debian Science Geography packages www
  • science-geometry

    Stretch:(1.7) Jess:(1.4) Debian Science geometry packages www
  • science-highenergy-physics

    Stretch:(1.7) Jess:(1.4) Debian Science High Energy Physics packages www
  • science-highenergy-physics-dev

    Stretch:(1.7) Jess:(1.4) Debian Science High Energy Physics development packages www
  • science-imageanalysis

    Stretch:(1.7) Jess:(1.4) Debian Science image analysis packages www
  • science-linguistics

    Stretch:(1.7) Jess:(1.4) Debian Science Linguistics packages www
  • science-logic

    Stretch:(1.7) Jess:(1.4) Debian Science Logic packages www
  • science-machine-learning

    Stretch:(1.7) Jess:(1.4) Debian Science Machine Learning packages www
  • science-mathematics

    Stretch:(1.7) Jess:(1.4) Debian Science Mathematics packages www
  • science-mathematics-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Mathematics-dev packages www
  • science-meteorology

    Stretch:(1.7) Jess:(1.4) Debian Science Meteorology packages www
  • science-meteorology-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Meteorology-dev packages www
  • science-nanoscale-physics

    Stretch:(1.7) Jess:(1.4) Debian Science Nanoscale Physics packages www
  • science-nanoscale-physics-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Nanoscale Physics development packages www
  • science-neuroscience-cognitive

    Stretch:(1.7) Jess:(1.4) Debian Science packages for Cognitive Neuroscience www
  • science-neuroscience-modeling

    Stretch:(1.7) Jess:(1.4) Debian Science packages for modeling of neural systems www
  • science-numericalcomputation

    Stretch:(1.7) Jess:(1.4) Debian Science Numerical Computation packages www
  • science-physics

    Stretch:(1.7) Jess:(1.4) Debian Science Physics packages www
  • science-physics-dev

    Stretch:(1.7) Jess:(1.4) Debian Science Physics-dev packages www
  • science-presentation

    Stretch:(1.7) Jess:(1.4) Debian Science generic tools for presentations www
  • science-psychophysics

    Stretch:(1.7) Jess:(1.4) Debian Science packages for Psychophysics www
  • science-robotics

    Stretch:(1.7) Jess:(1.4) Debian Robotics packages www
  • science-robotics-dev

    Stretch:(1.7) Jess:(1.4) Debian Robotics development packages www
  • science-simulations

    Stretch:(1.7) Jess:(1.4) Debian Science Simulation packages www
  • science-social

    Stretch:(1.7) Jess:(1.4) Debian Science social sciences packages www
  • science-statistics

    Stretch:(1.7) Jess:(1.4) Debian Science Statistics packages www
  • science-tasks

    Stretch:(1.7) Jess:(1.4) Debian Science tasks for tasksel www
  • science-typesetting

    Stretch:(1.7) Jess:(1.4) Debian Science typesetting packages www
  • science-viewing

    Stretch:(1.7) Jess:(1.4) Debian Science data visualisation packages www
  • science-viewing-dev

    Stretch:(1.7) Jess:(1.4) Debian Science development of visualisation applications www
  • scram

    Stretch:(0.11.5-1) Probabilistic Risk Analysis Tool www
  • scrm

    Stretch:(1.7.2-1) simulator of evolution of genetic sequences www
  • sctk

    Stretch:(2.4.10-20151007-1312Z+dfsg2-3) speech recognition scoring toolkit www
  • scythe

    Stretch:(0.994-4) Bayesian adaptor trimmer for sequencing reads www
  • seaview

    Stretch:(1:4.6.1.2-2) Jess:(1:4.5.3.1-2) Multiplatform interface for sequence alignment and phylogeny www
  • seelablet

    Stretch:(1.0.6-2) python library and scripts for SEELablet experiment box www
  • seelablet-common

    Stretch:(1.0.6-2) common files for SEELablet www
  • seer

    Stretch:(1.1.2-3) genomic sequence element (kmer) enrichment analysis www
  • seesat5

    Stretch & Jess:(0.90.10-1.1) a satellite location program
  • seqan-apps

    Stretch & Jess:(1.4.1+dfsg-2) C++ library for the analysis of biological sequences www
  • seqprep

    Stretch:(1.3.2-1) stripping adaptors and/or merging paired reads of DNA sequences with overlap www
  • seqprep-data

    Stretch:(1.3.2-1) example data set for seqprep - only used for testing www
  • seqtk

    Stretch:(1.2-1) Jess:(1.0-1) Fast and lightweight tool for processing sequences in the FASTA or FASTQ format www
  • sextractor

    Stretch:(2.19.5+dfsg-4) Jess:(2.19.5+dfsg-1) Source extractor for astronomical images www
  • sga

    Stretch:(0.10.15-2) de novo genome assembler that uses string graphs www
  • shelxle

    Stretch:(1.0.816-1) Jess:(1.0.677-1) graphical user interface for SHELXL www
  • sibsim4

    Stretch & Jess:(0.20-2) align expressed RNA sequences on a DNA template www
  • sickle

    Stretch:(1.33-1) windowed adaptive trimming tool for FASTQ files using quality www
  • sigma-align

    Stretch:(1.1.3-4) Jess:(1.1.3-3) Simple greedy multiple alignment of non-coding DNA sequences www
  • sigviewer

    Stretch:(0.5.1+svn556-5) Jess:(0.5.1+svn556-4) GUI viewer for biosignals such as EEG, EMG, and ECG www
  • sim4

    Stretch:(0.0.20121010-4) Jess:(0.0.20121010-1) tool for aligning cDNA and genomic DNA www
  • sim4db

    Stretch:(0~20150903+r2013-3+b2) batch spliced alignment of cDNA sequences to a target genome www
  • simgrid-java

    Stretch:(3.14.159-2) Jess:(3.11.1-9) Java bindings for the SimGrid Toolkit www
  • siril

    Stretch:(0.9.5-2) astronomical image processing tool www
  • skycat

    Stretch:(3.1.2+starlink1~b+dfsg-2+b3) Jess:(3.1.2+starlink1~b-8) Image visualization and access to catalogs and data for astronomy www
  • slang-xfig

    Stretch:(0.2.0~.35-2) Jess:(0.2.0~.35-1.1) produce plots and drawings through Xfig's fig2dev in S-Lang www
  • sleepyhead

    Stretch:(1.0.0-beta-2+dfsg-2) Sleep tracking software with a focus on monitoring CPAP treatment www
  • smalt

    Stretch:(0.7.6-6) Jess:(0.7.6-4) Sequence Mapping and Alignment Tool www
  • smalt-examples

    Stretch:(0.7.6-6) Jess:(0.7.6-4) Sequence Mapping and Alignment Tool (examples) www
  • smithwaterman

    Stretch:(0.0+20160702-1) determine similar regions between two strings or genomic sequences www
  • smrtanalysis

    Stretch:(0~20161126) software suite for single molecule, real-time sequencing www
  • snakemake

    Stretch:(3.10.0-1) pythonic workflow management system www
  • snap

    Stretch:(2013-11-29-6) Jess:(2013-11-29-1) location of genes from DNA sequence with hidden markov model www
  • sniffles

    Stretch:(1.0.2+ds-1) structural variation caller using third-generation sequencing www
  • snp-sites

    Stretch:(2.3.2-1) Jess:(1.5.0-1) Binary code for the package snp-sites www
  • snpomatic

    Stretch:(1.0-3) fast, stringent short-read mapping software www
  • spaced

    Stretch:(1.0.2+dfsg-1) alignment-free sequence comparison using spaced words www
  • spass

    Stretch:(3.7-4) Jess:(3.7-3) automated theorem prover for first-order logic with equality www
  • spatialite-bin

    Stretch:(4.3.0-2+b2) Jess:(4.1.1-4) Geospatial extension for SQLite - tools www
  • spd

    Stretch & Jess:(1.3.0-1) Synchrotron image corrections and azimuthal integration www
  • splash

    Stretch:(2.6.0-2) Jess:(2.5.0-1) Visualisation tool for Smoothed Particle Hydrodynamics simulation www
  • sprai

    Stretch:(0.9.9.22+dfsg-1) single-pass sequencing read accuracy improver www
  • spread-phy

    Stretch:(1.0.7+dfsg-1) analyze and visualize phylogeographic reconstructions www
  • squizz

    Stretch:(0.99c+dfsg-1) Jess:(0.99b+dfsg-3) Converter for genetic sequences and alignments www
  • ssake

    Stretch:(3.8.4-1) Jess:(3.8.2-1) genomics application for assembling millions of very short DNA sequences www
  • ssake-examples

    Stretch:(3.8.4-1) Jess:(3.8.2-1) example data for SSAKE, a genomic assembler of short reads www
  • sspace

    Stretch:(2.1.1+dfsg-2) scaffolding pre-assembled contigs after extension www
  • stacks

    Stretch:(1.44-2) pipeline for building loci from short-read DNA sequences www
  • stacks-web

    Stretch:(1.44-2) web interface for displaying loci from short-read sequences www
  • staden

    Stretch:(2.0.0+b11-2) Jess:(2.0.0+b10-1.1) DNA sequence assembly (Gap4/Gap5), editing and analysis tools www
  • staden-common

    Stretch:(2.0.0+b11-2) Jess:(2.0.0+b10-1.1) Architecture independent files for Staden www
  • staden-io-lib-examples

    Stretch:(1.14.8-2) Jess:(1.13.7-1) programs for maniuplating DNA sequencing files (usage examples) www
  • staden-io-lib-utils

    Stretch:(1.14.8-2) Jess:(1.13.7-1) programs for maniuplating DNA sequencing files www
  • stardata-common

    Stretch & Jess:(0.8) Common framework to manage astronomy packages www
  • starplot

    Stretch:(0.95.5-8.2) Jess:(0.95.5-8.1) 3-dimensional perspective star map viewer www
  • starpu-examples

    Stretch:(1.2.0+dfsg-4) Jess:(1.1.3+dfsg-3+b1) Task scheduler for heterogeneous multicore machines - exs www
  • stellarium

    Stretch:(0.15.0-1) Jess:(0.13.1-1) real-time photo-realistic sky generator www
  • stellarium-data

    Stretch:(0.15.0-1) Jess:(0.13.1-1) Stellarium data files www
  • step

    Stretch:(4:16.08.0-1) Jess:(4:4.14.2-1) interactive physical simulator for KDE www
  • stiff

    Stretch:(2.4.0-2) convert scientific FITS images to the TIFF format www
  • stimfit

    Stretch:(0.15.3-1+rpi1) Jess:(0.13.19-1) Program for viewing and analyzing electrophysiological data www
  • subread

    Stretch:(1.5.1+dfsg-4) toolkit for processing next-gen sequencing data www
  • subread-data

    Stretch:(1.5.1+dfsg-4) data files for subread package www
  • suitename

    Stretch:(0.3.070628-1) categorize each suite in an RNA backbone www
  • sumaclust

    Stretch:(1.0.20-1) fast and exact clustering of genomic sequences www
  • sumatra

    Stretch:(1.0.20-1) fast and exact comparison and clustering of sequences www
  • sumo

    Stretch:(0.28.0+dfsg1-1) Jess:(0.21.0+dfsg-1) Simulation of Urban MObility (SUMO) www
  • surankco

    Stretch:(0.0.r5+dfsg-1) Supervised Ranking of Contigs in de novo Assemblies www
  • survex

    Stretch:(1.2.30-1) Jess:(1.2.16-1) cave surveying and mapping software www
  • survex-aven

    Stretch:(1.2.30-1) Jess:(1.2.16-1) sophisticated cave survey viewer for Survex www
  • swarp

    Stretch:(2.38.0+dfsg-3) Jess:(2.19.1-1) Resample and co-add together FITS images www
  • swe-basic-data

    Stretch & Jess:(1.80.00.0002-1) basic data files for the libswe package www
  • swe-standard-data

    Stretch & Jess:(00004-1) standard data for the Swiss Ephemeris www
  • syrthes

    Stretch:(4.3.0-dfsg1-2) Jess:(4.1.1-dfsg1-5) Transient thermal simulations in complex solid geometries www
  • syrthes-gui

    Stretch:(4.3.0-dfsg1-2) Jess:(4.1.1-dfsg1-5) Transient thermal simulations in complex solid geometries - GUI www
  • syrthes-tests

    Stretch:(4.3.0-dfsg1-2) Jess:(4.1.1-dfsg1-5) Test cases for SYRTHES www
  • syrthes-tools

    Stretch:(4.3.0-dfsg1-2) Jess:(4.1.1-dfsg1-5) Transient thermal simulations in complex solid geometries - tools www
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  • T

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  • t-coffee

    Stretch:(11.00.8cbe486-5) Jess:(11.00.8cbe486-1) Multiple Sequence Alignment www
  • t-coffee-examples

    Stretch:(11.00.8cbe486-5) Jess:(11.00.8cbe486-1) annotated examples for the use of T-Coffee www
  • tabix

    Stretch:(1.3.2-2+rpi1) Jess:(0.2.6-2) generic indexer for TAB-delimited genome position files www
  • tandem-mass

    Stretch:(1:20151215-4) Jess:(1:2013.09.01-2) mass spectrometry software for protein identification www
  • tantan

    Stretch:(13-4) low complexity and tandem repeat masker for biosequences www
  • tcd-utils

    Stretch & Jess:(20061127-2) convert Tide Constituent Database (TCD) files
  • terraintool

    Stretch & Jess:(1.12a-1) Generates survex format terrain models from SRTM and ASTER data www
  • tessa

    Stretch:(0.3.1-6.2) Jess:(0.3.1-6.1) simulation of 3D optical systems with the FDTD method
  • tessa-mpi

    Stretch:(0.3.1-6.2) Jess:(0.3.1-6.1) simulation of 3D optical systems using FDTD on MPI clusters
  • thepeg-gui

    Stretch:(1.8.0-1.1) Jess:(1.8.0-1) Java GUI of ThePEG www
  • thepeg-reference

    Stretch:(1.8.0-1.1) Jess:(1.8.0-1) Code reference of ThePEG www
  • therion

    Stretch:(5.3.16-10+b2) Jess:(5.3.15-2) Cave surveying - 2D and 3D drawing software www
  • therion-viewer

    Stretch:(5.3.16-10+b2) Jess:(5.3.15-2) Cave surveying - 3D viewer for therion models www
  • theseus

    Stretch:(3.3.0-5) Jess:(3.0.0-1) superimpose macromolecules using maximum likelihood www
  • theseus-examples

    Stretch:(3.3.0-5) superimpose macromolecules using maximum likelihood (examples) www
  • tigr-glimmer

    Stretch:(3.02b-1) Jess:(3.02-3) Gene detection in archea and bacteria www
  • timbl

    Stretch:(6.4.8-1) Jess:(6.4.4-4) Tilburg Memory Based Learner www
  • timblserver

    Stretch:(1.11-1) Jess:(1.7-4) Server extensions for Timbl www
  • tksao

    Stretch:(7.5+repack1-2) Tk widgets for astronomical imaging and data visualization www
  • tm-align

    Stretch:(20160521+dfsg-2) Jess:(20140601+dfsg-1) structural alignment of proteins www
  • tophat

    Stretch & Jess:(2.0.10-1) fast splice junction mapper for RNA-Seq reads www
  • topp

    Stretch:(2.0.0-4+b1) Jess:(1.11.1-5) set of programs implementing The OpenMS Proteomic Pipeline www
  • toppred

    Stretch:(1.10-4) transmembrane topology prediction www
  • toulbar2

    Stretch:(0.9.8-1) Exact combinatorial optimization for Graphical Models www
  • transcalc

    Stretch:(0.14-6) Jess:(0.14-5) microwave and RF transmission line calculator www
  • transdecoder

    Stretch:(3.0.1+dfsg-1) find coding regions within RNA transcript sequences www
  • transrate-tools

    Stretch:(1.0.0-1) helper for transrate www
  • transtermhp

    Stretch:(2.09-3) Jess:(2.09-2) find rho-independent transcription terminators in bacterial genomes www
  • travis

    Stretch:(161013-1) Jess:(140902-1) trajectory analyzer and visualizer www
  • tree-ppuzzle

    Stretch:(5.2-8+b2) Jess:(5.2-7+b1) Parallelized reconstruction of phylogenetic trees by maximum likelihood www
  • tree-puzzle

    Stretch:(5.2-8+b2) Jess:(5.2-7+b1) Reconstruction of phylogenetic trees by maximum likelihood www
  • treeview

    Stretch:(1.1.6.4+dfsg1-2) Java re-implementation of Michael Eisen's TreeView www
  • treeviewx

    Stretch:(0.5.1+20100823-4) Jess:(0.5.1+20100823-3) Displays and prints phylogenetic trees www
  • trimmomatic

    Stretch:(0.36+dfsg-1) Jess:(0.32+dfsg-4) flexible read trimming tool for Illumina NGS data www
  • trinityrnaseq-examples

    Stretch:(2.2.0+dfsg-2) RNA-Seq De novo Assembly common example and testing files www
  • tunnelx

    Stretch:(20160713-3) Jess:(20140102-2) Cave Survey drawing software www
  • twms

    Stretch:(0.05t-4) Jess:(0.05t-2) tiny web map service www
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  • U

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  • ubertooth

    Stretch:(2015.09.R2-4) 2.4 GHz wireless development platform for Bluetooth experimentation www
  • ubertooth-firmware

    Stretch:(2015.09.R2-4) Firmware for Ubertooth www
  • ubertooth-firmware-source

    Stretch:(2015.09.R2-4) Source code for the Ubertooth firmware www
  • uc-echo

    Stretch:(1.12-9) Jess:(1.12-7) error correction algorithm designed for short-reads from NGS www
  • ucto

    Stretch:(0.9.6-1) Jess:(0.5.3-3.1+b1) Unicode Tokenizer www
  • uctodata

    Stretch:(0.4-1) Data files for Ucto www
  • uhd-host

    Stretch:(3.9.5-2) Jess:(3.7.3-1) universal hardware driver for Ettus Research products - host apps www
  • units-filter

    Stretch:(3.7-3) Jess:(3.7-1) Parser for expressions concerning physical values
  • urg-utils

    Stretch & Jess:(0.8.18-2) utilities for Hokuyo URG/UTM laser range scanners
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  • V

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  • v-sim

    Stretch:(3.7.2-2) Jess:(3.7.1-1) Visualize atomic structures www
  • v-sim-common

    Stretch:(3.7.2-2) Jess:(3.7.1-1) Visualize atomic structures (support files) www
  • v-sim-plugins

    Stretch:(3.7.2-2) Jess:(3.7.1-1) Plugins for V_Sim (a 3D visualization package) www
  • varna

    Stretch:(3-93+ds-1) Visualization Applet for RNA www
  • vcftools

    Stretch:(0.1.14+dfsg-4) Jess:(0.1.12+dfsg-1) Collection of tools to work with VCF files www
  • velvet

    Stretch:(1.2.10+dfsg1-3) Jess:(1.2.10+dfsg1-1) Nucleic acid sequence assembler for very short reads www
  • velvet-example

    Stretch:(1.2.10+dfsg1-3) Jess:(1.2.10+dfsg1-1) Example data for the Velvet sequence assembler www
  • velvet-long

    Stretch:(1.2.10+dfsg1-3) Jess:(1.2.10+dfsg1-1) Nucleic acid sequence assembler for very short reads, long version www
  • velvet-tests

    Stretch:(1.2.10+dfsg1-3) Jess:(1.2.10+dfsg1-1) Test data for the Velvet sequence assembler www
  • velvetoptimiser

    Stretch:(2.2.5-5) Jess:(2.2.5-2) automatically optimise Velvet do novo assembly parameters www
  • veusz

    Stretch:(1.21.1-1.1) Jess:(1.21.1-1) 2D scientific plotting application with graphical interface www
  • veusz-helpers

    Stretch:(1.21.1-1.1) Jess:(1.21.1-1) Architecture-specific helper module for Veusz www
  • via-bin

    Stretch:(2.0.4-2+b6) Jess:(2.0.4-2) tools for volumetric image analysis www
  • viewmol

    Stretch:(2.4.1-24) Jess:(2.4.1-22) graphical front end for computational chemistry programs www
  • visp-images-data

    Stretch:(3.0.0-2) Jess:(2.9.0-2) visual servoing library - dataset reference files www
  • vistrails

    Stretch:(2.2.4-1) Jess:(2.1.1-1) Science visualisation workflow toolkit www
  • votca-csg

    Stretch:(1.3.0-3+b1) Jess:(1.2.4-1) VOTCA's coarse-graining engine www
  • votca-csg-scripts

    Stretch:(1.3.0-3) Jess:(1.2.4-1) VOTCA's coarse-graining scripts www
  • votca-csg-tutorials

    Stretch:(1.3.0-3) Jess:(1.2.4-1) VOTCA's coarse-graining tutorials www
  • vowpal-wabbit

    Stretch:(7.3-1.1+b1) Jess:(7.3-1.1) fast and scalable online machine learning algorithm www
  • voxbo

    Stretch:(1.8.5~svn1246-2) Jess:(1.8.5~svn1246-1.1) processing, statistical analysis, and display of brain imaging data www
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  • W

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  • wcslib-tools

    Stretch:(5.16-1) Jess:(4.24-1) Command line tools utilizing wcslib www
  • wcstools

    Stretch:(3.9.4-2) Jess:(3.9.0+dfsg-1) Handle the WCS of a FITS image www
  • weightwatcher

    Stretch:(1.12-1) Combine maps and polygon data for astronomical image processing www
  • weka

    Stretch:(3.6.14-1) Jess:(3.6.11-1) Machine learning algorithms for data mining tasks www
  • wfrog

    Stretch:(0.8.2+svn973-1) Jess:(0.8.2+svn953-1) Web-based customizable weather station software www
  • wigeon

    Stretch:(20101212+dfsg1-1) Jess:(20101212+dfsg-1) reimplementation of the Pintail 16S DNA anomaly detection utility www
  • wise

    Stretch:(2.4.1-19) Jess:(2.4.1-17) comparison of biopolymers, like DNA and protein sequences www
  • wsclean

    Stretch:(2.2.1-1) Fast generic widefield interferometric imager www
  • wxastrocapture

    Stretch:(1.8.1+git20140821+dfsg-1+b1) Jess:(1.8.1+git20140821+dfsg-1) Windows linuX Astronomy Capture www
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  • X

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  • xbs

    Stretch:(0-10) Jess:(0-8) 3-d models and movies of molecules
  • xcrysden

    Stretch:(1.5.60-1+b1) Jess:(1.5.60-1) Crystalline and Molecular Structure Visualizer www
  • xcrysden-data

    Stretch & Jess:(1.5.60-1) Crystalline and Molecular Structure Visualizer (Data Files) www
  • xdrawchem

    Stretch:(2.0-6) Jess:(2.0-3) Chemical structures and reactions editor
  • xflr5

    Stretch:(6.09.06-2+b1) Jess:(6.09.06-2) analysis tool for airfoils www
  • xfoil

    Stretch & Jess:(6.99.dfsg-2) program for the design and analysis of subsonic airfoils www
  • xmakemol

    Stretch:(5.16-9) Jess:(5.16-7) program for visualizing atomic and molecular systems www
  • xmakemol-gl

    Stretch:(5.16-9) Jess:(5.16-7) program for visualizing atomic and molecular systems (OpenGL) www
  • xmds

    Stretch & Jess:(1.6.6-7) eXtensible Multi-Dimensional Simulator www
  • xmds2

    Stretch:(2.2.2+dfsg-3) Jess:(2.2.2+dfsg-1) eXtensible Multi-Dimensional Simulator www
  • xpa-tools

    Stretch:(2.1.18-1) Jess:(2.1.15-4) Tools for seamless communication between Unix programs www
  • xplot

    Stretch & Jess:(1.19-9) simple on-screen x-y column data plotter
  • xplot-xplot.org

    Stretch:(0.90.7.1-3) Jess:(0.90.7.1-2) fast tool to graph and visualize lots of data www
  • xppaut

    Stretch & Jess:(6.11b+1.dfsg-1) Phase Plane Plus Auto: Solves many kinds of equations www
  • xtide

    Stretch:(2.13.2-1+b1) Jess:(2.13.2-1) provides tide and current predictions www
  • xtide-coastline

    Stretch & Jess:(20020202-1) coastline data for xtide
  • xtide-data

    Stretch & Jess:(20100529-1) Harmonics data for xtide www
  • xyscan

    Stretch & Jess:(3.33-1) data thief for scientists www
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  • Y

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  • yagv

    Stretch & Jess:(0.4~20130422.r5bd15ed+dfsg-1) yet another G-code viewer www
  • ygraph

    Stretch & Jess:(0.16~cvs20090218-1.2) plot and animate data sets
  • yorick

    Stretch:(2.2.04+dfsg1-6+b3) Jess:(2.2.03+dfsg-3) interpreted language and scientific graphics www
  • yorick-av

    Stretch:(0.0.4-1) Jess:(0.0.3-3+b1) write movies from Yorick in various formats www
  • yorick-cubeview

    Stretch & Jess:(2.2-2) 3D FITS data viewer specialized in spectro-imaging www
  • yorick-curses

    Stretch & Jess:(0.1-6) interface to the (n)curses library for the Yorick language
  • yorick-data

    Stretch:(2.2.04+dfsg1-6) Jess:(2.2.03+dfsg-3) interpreted library for the Yorick language www
  • yorick-dev

    Stretch:(2.2.04+dfsg1-6+b3) Jess:(2.2.03+dfsg-3) development files for the Yorick interpreted language www
  • yorick-full

    Stretch:(2.2.04+dfsg1-6+b3) Jess:(2.2.03+dfsg-3) full installation of the Yorick interpreter and add-ons www
  • yorick-gl

    Stretch & Jess:(1.1+cvs20070922+dfsg-6.1) OpenGL 3D graphics support for the Yorick language www
  • yorick-gy

    Stretch & Jess:(0.0.5-1) GObject introspection and Gtk bindings for Yorick www
  • yorick-gyoto

    Stretch:(1.2.0-2) Jess:(0.2.3-1) General relativistic geodesic integration for the Yorick language www
  • yorick-hdf5

    Stretch:(0.8.0-8) Jess:(0.8.0-5+b1) Hierarchical Data Format 5 interface for the Yorick language
  • yorick-imutil

    Stretch & Jess:(0.5.7-3) fast image manipulation routines for the Yorick language
  • yorick-mira

    Stretch:(1.1.0+git20170124.3bd1c3~dfsg1-2) Jess:(0.9.10+dfsg-1) optical interferometry image reconstruction within Yorick www
  • yorick-ml4

    Stretch & Jess:(0.6.0-3) Matlab file format support for the Yorick language
  • yorick-mpeg

    Stretch & Jess:(0.1-3) MPEG output support for the Yorick language www
  • yorick-mpy-common

    Stretch:(2.2.04+dfsg1-6) Jess:(2.2.03+dfsg-3) Message Passing Yorick (common files) www
  • yorick-mpy-mpich2

    Stretch:(2.2.04+dfsg1-6+b3) Jess:(2.2.03+dfsg-3) Message Passing Yorick (MPICH2 build) www
  • yorick-mpy-openmpi

    Stretch:(2.2.04+dfsg1-6+b3) Jess:(2.2.03+dfsg-3) Message Passing Yorick (OpenMPI build) www
  • yorick-optimpack

    Stretch:(1.3.2+dfsg+1.4.0-1) Jess:(1.3.2+dfsg-1) optimization of large scale problems for the Yorick language www
  • yorick-soy

    Stretch & Jess:(1.4.0-3) sparse matrix operations for the Yorick language www
  • yorick-spydr

    Stretch & Jess:(0.8.2-3) FITS image display and simple analysis www
  • yorick-svipc

    Stretch:(0.16-2+b1) Jess:(0.16-2) interprocess communication (shared memory...) for Yorick www
  • yorick-yao

    Stretch:(5.4.0-1+b1) Jess:(5.4.0-1) Yorick-based adaptive optics system simulator www
  • yorick-yeti

    Stretch:(6.4.0-1) Jess:(6.3.3-2) utility plugin for the Yorick language www
  • yorick-yeti-fftw

    Stretch:(6.4.0-1) Jess:(6.3.3-2) FFT plugin for the Yorick language www
  • yorick-yeti-regex

    Stretch:(6.4.0-1) Jess:(6.3.3-2) POSIX regular expressions for the Yorick language www
  • yorick-yeti-tiff

    Stretch:(6.4.0-1) Jess:(6.3.3-2) TIFF image format input for the Yorick language www
  • yorick-ygsl

    Stretch:(1.2.1-1) Jess:(1.2.0-1) GSL special functions plugin for the Yorick language www
  • yorick-ynfft

    Stretch:(1.0.3-1) Jess:(1.0.2-2) nonequispaced fast Fourier transform for Yorick www
  • yorick-yutils

    Stretch & Jess:(1.5.2-1) various utilities for the Yorick language
  • yorick-z

    Stretch & Jess:(1.2.0+cvs20080115-5) zlib, jpeg and png support for the Yorick language www
  • Back to top
  • Z

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  • z3

    Stretch:(4.4.1-0.3) theorem prover from Microsoft Research www
  • z88

    Stretch:(13.0.0+dfsg2-4) Jess:(13.0.0+dfsg2-3) Finite Element Analysis Program - runtime www
  • z88-data

    Stretch:(13.0.0+dfsg2-4) Jess:(13.0.0+dfsg2-3) Finite Element Analysis Program - data www
  • zalign

    Stretch:(0.9.1-2+b2) Jess:(0.9.1-1+b1) parallel local alignment of biological sequences www
  • zegrapher

    Stretch:(3.0-2) Jess:(2.0-4) plotting mathematical functions and sequences on the plane www
  • zimpl

    Stretch & Jess:(3.3.2-1) mathematical modeling language for optimization problems www
  • ztex-bmp

    Stretch & Jess:(20120314-2) universal macro processor www
Last modified on Sunday, 10 September 2017 19:37
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