Science Packages

Science related packages

To install Raspbian software on a Raspberry Pi

Packages are installed using LXterminal. First get an updated package list by entering the following command in to LXterminal if this has not been done today sudo apt-get update
Then install your chosen package with the command sudo apt-get install package name Find out more with the Guide to installing software with the apt-get command

Rate a Raspberry Pi software package from this list

Let other users know how well packages work on the Raspberry Pi.
Rating Key:
Working, Not Working, 1 Like, 1 Dislike, 1 Neutral, 1 View Comments
Speed-Slow, Speed-Usable, Speed Good

WWW: Please Note: each listing has a www link to a related webpage, the links are supplied by the author. I can't guarantee thay are all active and related to the listed package.

Raspbian Program Versions: Jess(#) = available on the Jessie distribution, Whez(#) available on the Wheezy distribution.

Jump to section A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

SCIENCE

  • 3depict

    Jess:(0.0.16-2.1) Whez:(0.0.10-1) visualisation and analysis for single valued point data www
  • Back to top
  • A

  • Rate It
  • abacas

    Jess:(1.3.1-2) Whez:(1.3.1-1) Algorithm Based Automatic Contiguation of Assembled Sequences www
  • abinit

    Jess:(7.8.2-2) Whez:(5.3.4.dfsg-3) package for electronic structure calculations www
  • acedb-other

    Jess & Whez:(4.9.39+dfsg.01-5) retrieval of DNA or protein sequences www
  • acedb-other-belvu

    Jess & Whez:(4.9.39+dfsg.01-5) multiple sequence alignment editor www
  • acedb-other-dotter

    Jess & Whez:(4.9.39+dfsg.01-5) visualisation of sequence similarity www
  • aces3

    Jess:(3.0.8-4) Whez:(3.0.6-7) Advanced Concepts in Electronic Structure III www
  • aces3-data

    Jess:(3.0.8-4) Advanced Concepts in Electronic Structure III www
  • achilles

    Jess & Whez:(2-8) An artificial life and evolution simulator
  • aeskulap

    Jess:(0.2.2b1-13) Whez:(0.2.2b1-11) medical image viewer and DICOM network client www
  • aevol

    Jess:(4.4-1) digital genetics model to run Evolution Experiments in silico www
  • aghermann

    Jess:(1.0.2-1) Whez:(0.6.0.1-1) Sleep-research experiment manager www
  • algotutor

    Jess & Whez:(0.8.6-1) program for observing the intermediate steps of algorithm www
  • alien-hunter

    Jess:(1.7-3) Whez:(1.7-1) Interpolated Variable Order Motifs to identify horizontally acquired DNA www
  • altree

    Jess:(1.3.1-2+b1) Whez:(1.2.1-1) program to perform phylogeny-based association and localization analysis www
  • altree-examples

    Jess:(1.3.1-2) Whez:(1.2.1-1) example files for ALTree www
  • amap-align

    Jess:(2.2-4) Whez:(2.2-3) Protein multiple alignment by sequence annealing
  • ampliconnoise

    Jess:(1.29-2) Whez:(1.25-1) removal of noise from 454 sequenced PCR amplicons www
  • anfo

    Jess:(0.98-4+b1) Short Read Aligner/Mapper from MPG www
  • ants

    Jess & Whez:(1.9.2+svn680.dfsg-4) advanced normalization tools for brain and image analysis www
  • apbs

    Jess:(1.4-1) Whez:(1.3.0-2) Adaptive Poisson Boltzmann Solver www
  • aragorn

    Jess:(1.2.36-4) tRNA and tmRNA detection in nucleotide sequences www
  • arden

    Jess:(1.0-1) specificity control for read alignments using an artificial reference www
  • ask

    Jess:(1.0.1-2) Adaptive Sampling Kit for big experimental spaces www
  • astronomical-almanac

    Jess & Whez:(5.6-4) astronomical almanac - calculate planet and star positions www
  • autodock

    Jess:(4.2.6-2) Whez:(4.2.3-2) analysis of ligand binding to protein structure www
  • autodock-getdata

    Jess:(4.2.6-2) Whez:(4.2.3-2) instructions for getData to collect compounds www
  • autodock-test

    Jess:(4.2.6-2) Whez:(4.2.3-2) test files for AutoDock www
  • autodock-vina

    Jess:(1.1.2-3) Whez:(1.1.2-2) docking of small molecules to proteins www
  • autogrid

    Jess:(4.2.6-2) Whez:(4.2.3-2) pre-calculate binding of ligands to their receptor www
  • autogrid-test

    Jess:(4.2.6-2) Whez:(4.2.3-2) test files for AutoGrid www
  • avce00

    Jess:(2.0.0-3) Whez:(2.0.0-2) Conversion of ESRI Arcinfo Vector Coverage in E00 format www
  • avogadro

    Jess:(1.0.3-10.1+b1) Whez:(1.0.3-5) Molecular Graphics and Modelling System www
  • avogadro-data

    Jess:(1.0.3-10.1) Whez:(1.0.3-5) Molecular Graphics and Modelling System (Data Files) www
  • aweather

    Jess:(0.8.1-1+b1) Whez:(0.7-1) Advanced Weather Monitoring Program www
  • Back to top
  • B

  • Rate It
  • ballview

    Jess:(1.4.2+20140406-1+b1) Whez:(1.4.1+20111206-4) free molecular modeling and molecular graphics tool www
  • bamtools

    Jess:(2.3.0+dfsg-2) toolkit for manipulating BAM (genome alignment) files www
  • bauble

    Jess & Whez:(0.9.7-2) biodiversity collection manager software application www
  • bedtools

    Jess:(2.21.0-1) Whez:(2.16.1-1) suite of utilities for comparing genomic features www
  • bedtools-test

    Jess:(2.21.0-1) test data for the bedtools package www
  • bibus

    Jess:(1.5.2-4) Whez:(1.5.2-1) bibliographic database www
  • biogenesis

    Jess:(0.8-2) Whez:(0.8-1) artificial life program that simulates evolution of organisms www
  • biomaj

    Jess:(1.2.3-4) Whez:(1.2.1-1) biological data-bank updater www
  • biomaj-properties

    Jess:(1.2.3-4) Whez:(1.2.1-1) biological data-bank updater - example properties files www
  • bioperl

    Jess:(1.6.924-1) Whez:(1.6.901-3) Perl tools for computational molecular biology www
  • bioperl-run

    Jess:(1.6.9-2) Whez:(1.6.9-1) BioPerl wrappers: scripts www
  • biosig-tools

    Jess:(1.3.0-2+b2) Whez:(1.3.0-2) format conversion tools for biomedical data formats www
  • biosquid

    Jess:(1.9g+cvs20050121-4) Whez:(1.9g+cvs20050121-2) utilities for biological sequence analysis
  • bist

    Jess & Whez:(0.5.2-1) chemical drawing tool www
  • bkchem

    Jess & Whez:(0.13.0-4) Chemical structures editor www
  • blast2

    Jess:(1:2.2.26.20120620-8) Whez:(1:2.2.26.20120620-2) Basic Local Alignment Search Tool www
  • bodr

    Jess:(10-1) Whez:(9-1) Blue Obelisk Data Repository www
  • boinc-app-milkyway

    Jess:(0.18d-4+b1) Whez:(0.18d-1.1) Milkyway@home application for the BOINC client www
  • boinc-app-seti

    Jess:(7.28~svn2633-3+rpi1) Whez:(6.97~svn1409-1) SETI@home application for the BOINC client www
  • boinc-app-seti-graphics

    Jess:(7.28~svn2633-3+rpi1) SETI@home application for the BOINC client (with graphics) www
  • boolector

    Jess:(1.5.118.6b56be4.121013-1) Whez:(1.4.ffc2089.100608-1) SMT solver for bit-vectors and arrays www
  • bowtie

    Jess:(1.0.0-5) Whez:(0.12.7-3) Ultrafast memory-efficient short read aligner www
  • bowtie-examples

    Jess:(1.0.0-5) Whez:(0.12.7-3) Examples for bowtie, the ultrafast memory-efficient short read aligner www
  • bowtie2-examples

    Jess:(2.2.4-1) Whez:(2.0.0-beta6-3) Examples for bowtie2 www
  • boxshade

    Jess:(3.3.1-8) Whez:(3.3.1-7+wheezy1) Pretty-printing of multiple sequence alignments www
  • bppphyview

    Jess:(0.3.0-1) Whez:(0.2.1-1) Bio++ Phylogenetic Viewer
  • bppsuite

    Jess & Whez:(0.7.0-1) Bio++ program suite
  • bwa

    Jess & Whez:(0.6.2-1) Burrows-Wheeler Aligner www
  • Back to top
  • C

  • Rate It
  • cafeobj

    Jess:(1.5.2-2) new generation algebraic specification and programming language www
  • cain

    Jess:(1.9-8) Whez:(1.9-4) simulations of chemical reactions www
  • cain-examples

    Jess:(1.9-8) Whez:(1.9-4) simulations of chemical reactions www
  • cain-solvers

    Jess:(1.9-8) Whez:(1.9-4) simulations of chemical reactions www
  • camitk-actionstatemachine

    Jess:(3.3.2-2) pipeline replay application for the CamiTK library www
  • camitk-imp

    Jess:(3.3.2-2) workbench application for the CamiTK library www
  • caret

    Jess:(5.6.4~dfsg.1-3+b1) Whez:(5.6.4~dfsg.1-3) Computerized Anatomical Reconstruction and Editing Toolkit www
  • cassiopee

    Jess:(1.0.1+dfsg-3) index and search tool in genomic sequences www
  • cba

    Jess:(0.3.6-4.1) Whez:(0.3.6-4) Continuous Beam Analysis www
  • cbflib-bin

    Jess:(0.9.2.2-1) Whez:(0.7.9.1-3) utilities to manipulate CBF files www
  • cbmc

    Jess:(4.9-4) Whez:(4.1-1.2) bounded model checker for C and C++ programs www
  • cclib

    Jess:(1.1-1) Whez:(1.0.1-2) Parsers and algorithms for computational chemistry www
  • cd-hit

    Jess:(4.6.1-2012-08-27-2) Whez:(4.6-2012-04-25-1) suite of programs designed to quickly group sequences www
  • cdbfasta

    Jess:(0.99-20100722-1) Constant DataBase indexing and retrieval tools for multi-FASTA files www
  • celestia

    Jess:(1.6.1+dfsg-3.1) Whez:(1.6.1+dfsg-2) real-time visual space simulation www
  • celestia-common

    Jess:(1.6.1+dfsg-3.1) Whez:(1.6.1+dfsg-2) datafiles for Celestia, a real-time visual space simulation www
  • celestia-glut

    Jess:(1.6.1+dfsg-3.1) Whez:(1.6.1+dfsg-2) real-time visual space simulation (GLUT frontend) www
  • cernlib

    Jess:(20061220+dfsg3-4.1) Whez:(20061220+dfsg3-2) CERNLIB data analysis suite - general use metapackage www
  • cernlib-core

    Jess:(20061220+dfsg3-4.1) Whez:(20061220+dfsg3-2) CERNLIB data analysis suite - main libraries and programs www
  • cernlib-extras

    Jess:(20061220+dfsg3-4.1) Whez:(20061220+dfsg3-2) CERNLIB data analysis suite - extra programs www
  • cernlib-montecarlo

    Jess:(20061220+dfsg3-3) Whez:(20061220+dfsg3-2) CERNLIB Monte Carlo libraries www
  • cgns-convert

    Jess:(3.1.4.2-2+b1) Whez:(3.1.3.4-1) CFD General Notation System - Conversion tools www
  • ch5m3d

    Jess:(1.2.5+dfsg-1) create and visualize 3-dimensional drawings of simple molecules www
  • chemical-structures

    Jess:(2.2.dfsg.0-12) Whez:(2.2.dfsg.0-8) set of molecular structures in open formats
  • chemtool

    Jess:(1.6.14-1) Whez:(1.6.13-1) chemical structures drawing program www
  • chimeraslayer

    Jess:(20101212+dfsg-1) detects likely chimeras in PCR amplified DNA www
  • choreonoid

    Jess:(1.1.0+dfsg-6.1+b2) Integrated robotics GUI environment www
  • choreonoid-data

    Jess:(1.1.0+dfsg-6.1) Integrated robotics GUI environment - shared data www
  • choreonoid-plugins-base

    Jess:(1.1.0+dfsg-6.1+b2) Integrated robotics GUI environment - core plug-ins www
  • circos

    Jess:(0.66-1) Whez:(0.61-3) plotter for visualizing data www
  • circos-tools

    Jess:(0.18-1) Whez:(0.16-2) plotter for visualizing data - helper utilities www
  • clearcut

    Jess:(1.0.9-1) extremely efficient phylogenetic tree reconstruction www
  • clinica

    Jess:(0.3.0-1) Whez:(0.2.1~dfsg-1) Simple medical records manager www
  • clinica-common

    Jess:(0.3.0-1) Whez:(0.2.1~dfsg-1) Simple medical records manager (architecture independent files) www
  • clinica-dev

    Jess:(0.3.0-1) Whez:(0.2.1~dfsg-1) Simple medical records manager (development files) www
  • clinica-plugins

    Jess:(0.3.0-1) Whez:(0.2.1~dfsg-1) Simple medical records manager (plugins) www
  • clonalframe

    Jess & Whez:(1.2-3) inference of bacterial microevolution using multilocus sequence data www
  • clustalo

    Jess:(1.2.1-1) Whez:(1.1.0-1) General purpose multiple sequence alignment program for proteins www
  • clustalw

    Jess:(2.1+lgpl-4) Whez:(2.1+lgpl-2) global multiple nucleotide or peptide sequence alignment www
  • clustalx

    Jess:(2.1+lgpl-3) Whez:(2.1+lgpl-2) Multiple alignment of nucleic acid and protein sequences (graphical interface) www
  • cmtk

    Jess:(3.2.2-1.3) Whez:(2.2.2-2) Computational Morphometry Toolkit www
  • cnrun

    Jess:(1.1.14-1) NeuroML-capable neuronal network simulator www
  • code-aster

    Jess:(11.5.0+dfsg2-3+b1) Whez:(10.6.0-1-4) Code_Aster finite element program - metapackage www
  • code-aster-gui

    Jess:(1.13.1-2) Whez:(1.8.4-5) Graphical user interface for Code_Aster - client www
  • code-aster-mpi-engine

    Jess:(11.5.0+dfsg2-3+b1) Whez:(10.6.0-1-4) Code_Aster finite element program - parallel binary www
  • code-aster-run

    Jess:(1.13.1-2) Whez:(1.8.4-5) Graphical user interface for Code_Aster - server www
  • code-aster-test

    Jess:(11.5.0+dfsg2-3) Whez:(10.6.0-1-4) Code_Aster finite element program - test files and examples www
  • code-saturne

    Jess:(3.3.2-4) Whez:(2.1.7-1) General purpose Computational Fluid Dynamics (CFD) software www
  • code-saturne-bin

    Jess:(3.3.2-4) Whez:(2.1.7-1) General purpose Computational Fluid Dynamics (CFD) software - binaries www
  • code-saturne-data

    Jess:(3.3.2-4) Whez:(2.1.7-1) General purpose Computational Fluid Dynamics (CFD) software - data www
  • code-saturne-doc

    Jess:(3.3.2-4) Whez:(2.1.7-1) General purpose Computational Fluid Dynamics (CFD) software - Documentation www
  • code-saturne-include

    Jess:(3.3.2-4) Whez:(2.1.7-1) General purpose Computational Fluid Dynamics (CFD) software - includes www
  • coinor-cbc

    Jess:(2.8.12-1) Coin-or branch-and-cut mixed integer programming solver www
  • coinor-clp

    Jess:(1.15.10-1) Coin-or linear programming solver www
  • coinor-csdp

    Jess & Whez:(6.1.1-1) A software package for semidefinite programming www
  • coinor-libcbc3

    Jess:(2.8.12-1) Coin-or branch-and-cut mixed integer programming solver (shared libraries) www
  • coinor-libcgl1

    Jess:(0.58.9-1) COIN-OR Cut Generation Library www
  • coinor-libclp1

    Jess:(1.15.10-1) Coin-or linear programming solver (shared libraries) www
  • coinor-libcoinutils3

    Jess:(2.9.15-3) Coin-or collection of utility classes (binaries and libraries) www
  • coinor-libdylp0

    Jess & Whez:(1.6.0-1.1) Linear programming solver using the dynamic simplex algorithm www
  • coinor-libflopc++0

    Jess:(1.0.6-3.1+b1) Whez:(1.0.6-3.1) Formulation of Linear Optimization Problems in C++ www
  • coinor-libosi1

    Jess:(0.106.9-1) COIN-OR Open Solver Interface www
  • coinor-libsymphony3

    Jess:(5.6.1-1) COIN-OR solver for mixed-integer linear programs (shared libraries) www
  • coinor-libvol0

    Jess & Whez:(1.1.7-1) Coin-or linear programming solver www
  • coinor-symphony

    Jess:(5.6.1-1) COIN-OR solver for mixed-integer linear programs www
  • complearn-tools

    Jess & Whez:(1.1.7-2) complearn machine-learning command-line utilities www
  • concavity

    Jess:(0.1-2) predictor of protein ligand binding sites from structure and conservation www
  • connectome-workbench

    Jess:(1.0-2) brain visualization, analysis and discovery tool www
  • conquest-common

    Jess:(1.4.17d-1) ConQuest DICOM Server - common files www
  • conquest-dbase

    Jess:(1.4.17d-1) ConQuest DICOM Server - DBaseIII backend www
  • conquest-mysql

    Jess:(1.4.17d-1) ConQuest DICOM Server - MySQL backend www
  • conquest-postgres

    Jess:(1.4.17d-1) ConQuest DICOM Server - PostgreSQL backend www
  • conquest-sqlite

    Jess:(1.4.17d-1) ConQuest DICOM Server - SQLite backend www
  • conservation-code

    Jess:(20110309.0-3) protein sequence conservation scoring tool www
  • cp2k

    Jess:(2.5.1-3) Whez:(2.2.426-8) Ab Initio Molecular Dynamics www
  • cp2k-data

    Jess:(2.5.1-3) Whez:(2.2.426-8) Ab Initio Molecular Dynamics (data files) www
  • cpl-plugin-amber

    Jess:(4.3.1+dfsg-1) ESO data reduction pipeline for AMBER www
  • cpl-plugin-fors

    Jess:(5.0.0+dfsg-2) ESO data reduction pipeline for FORS www
  • cpl-plugin-giraf

    Jess:(2.12.1+dfsg-1) ESO data reduction pipeline for GIRAFFE www
  • cpl-plugin-hawki

    Jess:(1.8.14+dfsg-2) ESO data reduction pipeline for HAWK-I www
  • cpl-plugin-hawki-calib

    Jess:(1.8.14+dfsg-2) ESO data reduction pipeline calibration data downloader for HAWK-I www
  • cpl-plugin-kmos

    Jess:(1.3.5+dfsg-1) ESO data reduction pipeline for KMOS www
  • cpl-plugin-sinfo

    Jess:(2.5.2+dfsg-2) ESO data reduction pipeline SINFONI www
  • cpl-plugin-uves

    Jess:(5.4.3+dfsg-1) ESO data reduction pipeline for UVES www
  • cpl-plugin-vimos

    Jess:(2.9.15+dfsg-1) ESO data reduction pipeline for VIMOS www
  • cpl-plugin-xshoo

    Jess:(2.5.2+dfsg-1) ESO data reduction pipeline for XSHOOTER www
  • critterding

    Jess & Whez:(1.0-beta12.1-1.2) Evolving Artificial Life www
  • ctsim

    Jess:(5.2.0-2) Whez:(5.2.0-1.1) Computed tomography simulator www
  • ctsim-help

    Jess:(5.2.0-2) Whez:(5.2.0-1.1) Online help file for CTSim www
  • Back to top
  • D

  • Rate It
  • dans-gdal-scripts

    Jess:(0.23-2+b1) Whez:(0.18-1.1) GDAL contributed tools by Geographic Information Network of Alaska www
  • dcmtk

    Jess:(3.6.0-15) Whez:(3.6.0-12) OFFIS DICOM toolkit command line utilities www
  • dialign

    Jess:(2.2.1-7) Whez:(2.2.1-5) Segment-based multiple sequence alignment www
  • dialign-tx

    Jess:(1.0.2-7) Whez:(1.0.2-2) Segment-based multiple sequence alignment www
  • dialign-tx-data

    Jess:(1.0.2-7) Whez:(1.0.2-2) Segment-based multiple sequence alignment (data files) www
  • dicomnifti

    Jess:(2.32.1-1) Whez:(2.30.0-1) converts DICOM files into the NIfTI format www
  • dicompyler

    Jess:(0.4.2-2) Whez:(0.4.1-1-1) radiation therapy research platform www
  • diet-agent

    Jess & Whez:(2.8.0-1) DIET grid middleware - agent www
  • dimbl

    Jess:(0.12-2) Whez:(0.11-1) Distributed Memory Based Learner www
  • discosnp

    Jess:(1.2.5-1) discovering Single Nucleotide Polymorphism from raw set(s) of reads www
  • disulfinder

    Jess:(1.2.11-4) Whez:(1.2.11-2) cysteines disulfide bonding state and connectivity predictor www
  • disulfinder-data

    Jess:(1.2.11-4) Whez:(1.2.11-2) data files for predictor of disulfide bonds in proteins www
  • dnaclust

    Jess:(3-2) tool for clustering millions of short DNA sequences www
  • dotur

    Jess & Whez:(1.53-2) distance based OTU and richness estimation www
  • dozzaqueux

    Jess:(3.35-2) Whez:(3.21-4) simulator for chemical mixtures www
  • dozzaqueux-data

    Jess:(3.35-2) Whez:(3.21-4) databases for chemical mixtures www
  • drawxtl

    Jess & Whez:(5.5-3) crystal structure viewer www
  • drslib

    Jess:(0.3.0a3-5) Whez:(0.3.0a3-3) Command-line tools for the Data Reference Syntax library www
  • dsdp

    Jess & Whez:(5.8-9.1) Software for Semidefinite Programming www
  • dssp

    Jess:(2.2.1-2) Whez:(2.0.4-2) protein secondary structure assignment based on 3D structure www
  • dx

    Jess:(1:4.4.4-7+b1) Whez:(1:4.4.4-4) OpenDX (IBM Visualization Data Explorer) - main package www
  • dxsamples

    Jess:(4.4.0-1) Whez:(4.2.0-1) Sample programs for the OpenDX Data Explorer www
  • Back to top
  • E

  • Rate It
  • e00compr

    Jess & Whez:(1.0.1-2) A program to read/write Arcinfo compressed E00 files www
  • easychem

    Jess:(0.6-8) Whez:(0.6-7) Draw high-quality molecules and 2D chemical formulas www
  • ecaccess

    Jess:(4.0.1-1) Whez:(4.0.0-3) clients to access ECMWF facilities www
  • edfbrowser

    Jess:(1.54-2) Whez:(1.48-1) viewer for biosignal storage files such as bdf and edf www
  • edtsurf

    Jess:(0.2009-3) triangulated mesh surfaces for protein structures www
  • eficas

    Jess & Whez:(6.4.0-1-1.1) Graphical editor for Code Aster command files www
  • elk-lapw

    Jess:(2.3.22-1) All-Electron Density-Functional Electronic Structure Code www
  • elki

    Jess:(0.6.0-2) Whez:(0.5.0-1) Data mining algorithm development framework www
  • elmer

    Jess:(6.1.0.svn.5396.dfsg2-3+rpi2) Whez:(6.1.0.svn.5396.dfsg2-2) finite element multiphysics suite - binaries www
  • elmer-common

    Jess:(6.1.0.svn.5396.dfsg2-3+rpi2) Whez:(6.1.0.svn.5396.dfsg2-2) finite element multiphysics suite - architecture-independent files www
  • embassy-domainatrix

    Jess:(0.1.650-1) Whez:(0.1.0+20110714-1) Extra EMBOSS commands to handle domain classification file www
  • embassy-domalign

    Jess:(0.1.650-1) Whez:(0.1.0+20110714-1) Extra EMBOSS commands for protein domain alignment www
  • embassy-domsearch

    Jess:(1:0.1.650-1) Whez:(1:0.1.0+20110714-1) Extra EMBOSS commands to search for protein domains www
  • emboss

    Jess:(6.6.0+dfsg-1) Whez:(6.4.0-2) european molecular biology open software suite www
  • emboss-data

    Jess:(6.6.0+dfsg-1) Whez:(6.4.0-2) data files for the EMBOSS package www
  • emboss-explorer

    Jess:(2.2.0-8) Whez:(2.2.0-7+deb7u1) web-based GUI to EMBOSS www
  • emboss-lib

    Jess:(6.6.0+dfsg-1) Whez:(6.4.0-2) EMBOSS Libraries www
  • engauge-digitizer

    Jess:(5.2-1) Whez:(5.0-3) interactively extracts numbers from bitmap graphs or maps www
  • ent

    Jess:(1.1debian-4) Whez:(1.1debian-2) pseudorandom number sequence test program www
  • epigrass

    Jess:(2.4.0-2) Whez:(2.0.4-3) scientific tool for simulations and scenario analysis in network epidemiology www
  • epsilon-bin

    Jess:(0.9.2-2) Whez:(0.9.1-2) Library for wavelet image compression - tools www
  • ergo

    Jess:(3.4.0-1) Quantum chemistry program for large-scale calculations www
  • eso-midas

    Jess:(13.09pl1.4-1) European Southern Observatory Munich Image Data Analysis System www
  • esorex

    Jess:(3.11-1) Whez:(3.9.6-1) Execution Tool for European Southern Observatory pipelines www
  • esys-particle

    Jess:(2.3-2) Whez:(2.1-4) Software for particle-based numerical modelling. MPI version. www
  • etsf-io

    Jess & Whez:(1.0.3-4) Binary tools to check, merge and read ETSF files www
  • exonerate

    Jess & Whez:(2.2.0-6) generic tool for pairwise sequence comparison www
  • expeyes

    Jess:(3.2.0-1) Whez:(2.0.0-3) hardware & software framework for developing science experiments www
  • expeyes-clib

    Jess:(3.2.0-1) hardware & software framework for developing science experiments www
  • extrema

    Jess & Whez:(4.4.5.dfsg-3) powerful visualization and data analysis tool www
  • Back to top
  • F

  • Rate It
  • fastaq

    Jess:(1.5.0-1) FASTA and FASTQ file manipulation tools www
  • fastdnaml

    Jess & Whez:(1.2.2-10) Tool for construction of phylogenetic trees of DNA sequences www
  • fastlink

    Jess & Whez:(4.1P-fix95-3) faster version of pedigree programs of Linkage www
  • fastqc

    Jess:(0.11.2+dfsg-3) quality control for high throughput sequence data www
  • fasttree

    Jess:(2.1.7-2) Whez:(2.1.4-1) phylogenetic trees from alignments of nucleotide or protein sequences www
  • fastx-toolkit

    Jess:(0.0.14-1) Whez:(0.0.13.2-1) FASTQ/A short nucleotide reads pre-processing tools www
  • fcc

    Jess:(2.8-1) Whez:(2.7-1) Script to compile C/C++ programs and link to Fortran libraries www
  • feedgnuplot

    Jess:(1.34-2) Pipe-oriented frontend to Gnuplot www
  • ffindex

    Jess:(0.9.9.3-2) Whez:(0.9.6.1-1) simple index/database for huge amounts of small files www
  • figtree

    Jess:(1.4-2) Whez:(1.3.1-1) graphical phylogenetic tree viewer www
  • filo

    Jess:(1.1+2011123001.1) Whez:(1.1+2011020401.2) FILe and stream Operations www
  • fitsverify

    Jess:(4.17-1) FITS File Format-Verification Tool www
  • fityk

    Jess:(1.2.1-0.1) Whez:(0.9.8-3) general-purpose nonlinear curve fitting and data analysis www
  • flexpart

    Jess:(9.02-9) Particle Dispersion model for tracing air transport phenomena www
  • flextra

    Jess:(5.0-2.1) Trajectory model for tracing air transport phenomena www
  • fractalnow

    Jess:(0.8.1-1) Fast, advanced fractal generator www
  • free42-nologo

    Jess:(1.4.77-1.1) Free42 is a re-implementation of the HP-42S calculator www
  • freecad

    Jess:(0.14.3702+dfsg-3) Whez:(0.12.5284-dfsg-7) Extensible Open Source CAx program (alpha) www
  • freecontact

    Jess:(1.0.21-3) fast protein contact predictor www
  • freediams

    Jess:(0.9.4-1) Whez:(0.7.6-1) pharmaceutical drug prescription and interaction manager www
  • freemedforms-common-resources

    Jess:(0.9.4-1) Whez:(0.7.6-1) common data for the FreeMedForms project applications www
  • freemedforms-emr

    Jess:(0.9.4-1) Whez:(0.7.6-1) electronic medical record manager www
  • freemedforms-emr-resources

    Jess:(0.9.4-1) Whez:(0.7.6-1) data for the FreeMedForms EMR www
  • freemedforms-freedata

    Jess:(0.9.4-1) Whez:(0.7.6-1) free extra-data for the FreeMedForms project www
  • freemedforms-libs

    Jess:(0.9.4-1) Whez:(0.7.6-1) common libs for the FreeMedForms project www
  • freemedforms-project

    Jess:(0.9.4-1) Whez:(0.7.6-1) FreeMedForms project www
  • freemedforms-theme

    Jess:(0.9.4-1) Whez:(0.7.6-1) theme for the FreeMedForms project www
  • frog

    Jess:(0.12.17-7.1+b1) Whez:(0.12.15-3) tagger and parser for Dutch language (runtime) www
  • frogdata

    Jess:(0.4-1) Whez:(0.3-2) Data files for Frog www
  • fslview

    Jess:(4.0.1-4) viewer for (f)MRI and DTI data www
  • ftools-fv

    Jess:(5.3+dfsg-5) Tool for viewing and editing FITS format files www
  • ftools-pow

    Jess:(5.3+dfsg-5) Curve plotting and image display interface tool www
  • funtools

    Jess:(1.4.4+dfsg2-1) Whez:(1.4.4-3) Minimal buy-in FITS utility package www
  • fxt-tools

    Jess:(0.3.0-1) Multithreaded tracing library www
  • Back to top
  • G

  • Rate It
  • g3data

    Jess:(1:1.5.3-2.1) Whez:(1:1.5.3-2) extract data from scanned graphs www
  • gabedit

    Jess:(2.4.8-1) Whez:(2.4.2-2) graphical user interface to Ab Initio packages www
  • gamgi

    Jess:(0.17.1-1) Whez:(0.15.8-1) General Atomistic Modelling Graphic Interface (GAMGI) www
  • gamgi-data

    Jess:(0.17.1-1) Whez:(0.15.8-1) General Atomistic Modelling Graphic Interface (data) www
  • garlic

    Jess & Whez:(1.6-1.1) A visualization program for biomolecules www
  • gausssum

    Jess:(2.2.6.1-1) Whez:(2.2.5-2) parse and display Gaussian, GAMESS, and etc's output www
  • gbrowse

    Jess:(2.54+dfsg-3) Whez:(2.48~dfsg-1) GMOD Generic Genome Browser www
  • gbrowse-calign

    Jess:(2.54+dfsg-3+b1) Whez:(2.48~dfsg-1) CAlign helper www
  • gbrowse-data

    Jess:(2.54+dfsg-3) Whez:(2.48~dfsg-1) Sample data to use GBrowse www
  • gchempaint

    Jess:(0.14.9-1) Whez:(0.12.12-1) 2D chemical structures editor for the GNOME2 desktop www
  • gcrystal

    Jess:(0.14.9-1) Whez:(0.12.12-1) lightweight crystal structures visualizer www
  • gcu-bin

    Jess:(0.14.9-1) Whez:(0.12.12-1) GNOME chemistry utils (helper applications) www
  • gcu-plugin

    Jess:(0.14.9-1) Whez:(0.12.12-1) GNOME chemistry utils (browser plugin) www
  • gcx

    Jess & Whez:(1.3-1.1) astronomical image processing and photometry gtk+ application www
  • gdal-bin

    Jess:(1.10.1+dfsg-8+b2) Whez:(1.9.0-3.1) Geospatial Data Abstraction Library - Utility programs www
  • gdis

    Jess:(0.90-5) Whez:(0.90-4) molecular and crystal model viewer www
  • gdis-data

    Jess:(0.90-5) Whez:(0.90-4) molecular and crystal model viewer (data files) www
  • gdpc

    Jess:(2.2.5-3) Whez:(2.2.5-2) visualiser of molecular dynamic simulations www
  • gdpc-examples

    Jess:(2.2.5-3) Whez:(2.2.5-2) example files for the gdpc program www
  • geant321

    Jess:(1:3.21.14.dfsg-11) Whez:(1:3.21.14.dfsg-10) [Physics] Particle detector description and simulation tool www
  • geant321-data

    Jess:(1:3.21.14.dfsg-11) Whez:(1:3.21.14.dfsg-10) [Physics] Data for GEANT 3.21 detector simulator www
  • gelemental

    Jess:(1.2.0-9) Whez:(1.2.0-8) Periodic Table viewer www
  • genometools

    Jess:(1.5.3-2) versatile genome analysis toolkit www
  • genometools-common

    Jess:(1.5.3-2) shared data files for GenomeTools www
  • gentle

    Jess:(1.9+cvs20100605+dfsg1-3) Whez:(1.9+cvs20100605+dfsg1-1) suite to plan genetic cloning www
  • geographiclib-tools

    Jess:(1.37-3) Whez:(1.21-1) C++ library to solve some geodesic problems -- tools www
  • geotiff-bin

    Jess:(1.4.0-5) Whez:(1.3.0+dfsg-3+rpi1) GeoTIFF (geografic enabled TIFF) library -- tools www
  • gerris

    Jess:(20131206+dfsg-5) Whez:(20110329-dfsg.2-1) Fluid Flow Solver www
  • gerris-mpi

    Jess:(20131206+dfsg-5) Whez:(20110329-dfsg.2-1) Fluid Flow Solver www
  • getdata

    Jess:(0.2-1) Whez:(0.1-1) management of external databases www
  • gff2aplot

    Jess & Whez:(2.0-7) pair-wise alignment-plots for genomic sequences in PostScript www
  • gff2ps

    Jess & Whez:(0.98d-4) produces PostScript graphical output from GFF-files www
  • gfsview

    Jess:(20121130+dfsg-1+b1) graphical viewer for Gerris simulation files www
  • ghkl

    Jess & Whez:(4.0.3-4) diffractometer computation control application www
  • ginkgocadx

    Jess:(3.7.0.1465.37+dfsg-1) Whez:(2.12.0.4889-1) Medical Imaging Software and complete DICOM Viewer www
  • glam2

    Jess:(1064-3) Whez:(1064-1) gapped protein motifs from unaligned sequences www
  • gmt

    Jess:(4.5.12-1) Whez:(4.5.7-2) Generic Mapping Tools www
  • gnuhealth

    Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System www
  • gnuhealth-client

    Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System - Client www
  • gnuhealth-server

    Jess:(2.4.1-2) Electronic Medical Record and Hospital Information System - Server www
  • gofigure2

    Jess:(0.9.0-3) Whez:(0.9.0-1) Tool for visualizing, processing and analysing of bioimages www
  • gperiodic

    Jess & Whez:(2.0.10-7) periodic table application www
  • gpiv

    Jess:(0.6.1-2.3) Whez:(0.6.1-2) GUI program for Particle Image Velocimetry www
  • gpiv-mpi

    Jess:(0.6.1-2.3) Whez:(0.6.1-2) GUI program for Particle Image Velocimetry - MPI version www
  • gpivtools

    Jess:(0.6.0-3.1) Whez:(0.6.0-3) command line programs for Particle Image Velocimetry www
  • gpivtools-mpi

    Jess:(0.6.0-3.1) Whez:(0.6.0-3) command line programs for Particle Image Velocimetry - MPI version www
  • gpx

    Jess:(0~20140109+git3570fc9-2) Gcode to x3g conversion post processor www
  • gpx2shp

    Jess:(0.71.0-1) Whez:(0.69-3.1) convert GPS or GPX file to ESRI Shape file www
  • gr-fcdproplus

    Jess:(3.7.11-3) Funcube Dongle Pro Plus controller for GNU Radio www
  • grads

    Jess:(2:2.0.2-3+b1) Whez:(2.0.a9-4) Grid Analysis and Display System for earth science data www
  • grass

    Jess:(6.4.4-1) Whez:(6.4.2-2) Geographic Resources Analysis Support System (GRASS GIS) www
  • grass-core

    Jess:(6.4.4-1) Whez:(6.4.2-2) GRASS GIS core components www
  • grass-gui

    Jess:(6.4.4-1) Whez:(6.4.2-2) GRASS GIS graphical user interfaces www
  • gravit-data

    Jess:(0.5.1+dfsg-1) data files for Gravit www
  • gri

    Jess:(2.12.23-8) Whez:(2.12.23-2.2) a language for scientific illustration www
  • grinder

    Jess:(0.5.3-3) Whez:(0.4.5-1) Versatile omics shotgun and amplicon sequencing read simulator www
  • gromacs

    Jess:(5.0.2-1) Whez:(4.5.5-2) Molecular dynamics simulator, with building and analysis tools www
  • gromacs-data

    Jess:(5.0.2-1) Whez:(4.5.5-2) GROMACS molecular dynamics sim, data and documentation www
  • gromacs-mpich

    Jess:(5.0.2-1) Whez:(4.5.5-2) Molecular dynamics sim, binaries for MPICH parallelization www
  • gromacs-openmpi

    Jess:(5.0.2-1) Whez:(4.5.5-2) Molecular dynamics sim, binaries for OpenMPI parallelization www
  • gvb

    Jess:(1.4-1) Whez:(1.2.1-1) visual simulator of 1 and 2-dimensional vibrations www
  • gwyddion

    Jess:(2.38-2) Whez:(2.28-2) Scanning Probe Microscopy visualization and analysis tool www
  • gwyddion-common

    Jess:(2.38-2) Whez:(2.28-2) architecture-independent files for Gwyddion SPM analysis tool www
  • gwyddion-plugins

    Jess:(2.38-2) Whez:(2.28-2) plugins for Gwyddion SPM analysis tool www
  • gyoto

    Jess:(0.2.3-1) Whez:(0.0.3-5) General relativistic ray-tracing www
  • Back to top
  • H

  • Rate It
  • h5utils

    Jess:(1.12.1-2.1+b1) Whez:(1.12.1-2) HDF5 files visualization tools www
  • harminv

    Jess:(1.3.1-10) Whez:(1.3.1-9) extraction of complex frequencies and amplitudes from time series www
  • hdf5-helpers

    Jess:(1.8.13+docs-15) Whez:(1.8.8-9) Hierarchical Data Format 5 (HDF5) - Helper tools www
  • hdf5-tools

    Jess:(1.8.13+docs-15) Whez:(1.8.8-9) Hierarchical Data Format 5 (HDF5) - Runtime tools www
  • hdfview

    Jess:(2.9-3+b1) Whez:(2.8.0-5) Java HDF Object viewer www
  • herwig++

    Jess:(2.6.0-1) Multi-purpose event generator for high energy physics www
  • herwig++-data

    Jess:(2.6.0-1) Herwig++ Data www
  • herwig++-dev

    Jess:(2.6.0-1) Herwig++ development files www
  • hhsuite-data

    Jess:(2.0.16-5) Whez:(2.0.15-1) sensitive protein sequence searching based on HMM-HMM alignment (data) www
  • hidrd

    Jess:(0.2.0-11) tools for parsing and generating HID report descriptors www
  • hmmer

    Jess:(3.1b1-3) Whez:(3.0-4) profile hidden Markov models for protein sequence analysis www
  • hmmer2

    Jess:(2.3.2-8) profile hidden Markov models for protein sequence analysis www
  • hmmer2-pvm

    Jess:(2.3.2-8) HMMER programs with PVM (Parallel Virtual Machine) support www
  • hodie

    Jess:(1.5-2) Whez:(1.5-1) prints the date in latin
  • hpcc

    Jess:(1.4.1-3) Whez:(1.4.1-2) HPC Challenge benchmark www
  • htcondor

    Jess:(8.2.3~dfsg.1-6+rpi1) distributed workload management system www
  • hyantesite

    Jess & Whez:(1.3.0-1) geomatic tool to compute neighbourhood population potential www
  • Back to top
  • I

  • Rate It
  • idba

    Jess:(1.1.2-1) iterative De Bruijn Graph De Novo short read assembler for transcriptome www
  • ifrit

    Jess:(3.4.2-1) Whez:(3.3.4-3) powerful tool for visualizing 3-dimensional data sets www
  • imagej

    Jess:(1.49i+dfsg-1) Whez:(1.46a-1) Image processing program inspired by NIH Image www
  • imagevis3d

    Jess:(3.1.0-4) Whez:(2.0.1-5) desktop volume rendering application for large data www
  • imview

    Jess:(1.1.9c-12+b1) Whez:(1.1.9c-9) Image viewing and analysis application www
  • indigo-utils

    Jess:(1.1.12-1) Whez:(1.0.0-2) Organic Chemistry Toolkit Utilities www
  • infernal

    Jess & Whez:(1.0.2-2) inference of RNA secondary structural alignments www
  • ipig

    Jess:(0.0.r5-1) integrating PSMs into genome browser visualisations www
  • itksnap

    Jess & Whez:(2.2.0-1.1) semi-automatic segmentation of structures in 3D images www
  • Back to top
  • J

  • Rate It
  • jalview

    Jess:(2.7.dfsg-4) Whez:(2.7.dfsg-2) multiple alignment editor www
  • jblas

    Jess:(1.2.3-5) Whez:(1.2.0-4) fast linear algebra library for Java www
  • jemboss

    Jess:(6.6.0+dfsg-1) Whez:(6.4.0-2) graphical user interface to EMBOSS www
  • jmol

    Jess & Whez:(12.2.32+dfsg2-1) Molecular Viewer www
  • julia-factcheck

    Jess:(0.1.2-2) Midje-like testing for Julia www
  • Back to top
  • K

  • Rate It
  • kalign

    Jess & Whez:(1:2.03+20110620-2) Global and progressive multiple sequence alignment www
  • kalzium

    Jess:(4:4.14.2-1) Whez:(4:4.8.4-1) periodic table and chemistry tools www
  • kalzium-data

    Jess:(4:4.14.2-1) Whez:(4:4.8.4-1) data files for Kalzium www
  • kissplice

    Jess:(2.1.0-1) Detection of various kinds of polymorphisms in RNA-seq data www
  • klustakwik

    Jess & Whez:(2.0.1-1) automatic sorting of the samples (spikes) into clusters www
  • kst

    Jess:(2.0.3-3) Whez:(2.0.3-1.3) scientific data plotting tool www
  • kst-data

    Jess:(2.0.3-3) Whez:(2.0.3-1.3) set of data files for kst www
  • kstars

    Jess:(4:4.14.2-1) Whez:(4:4.8.4-1) desktop planetarium for KDE www
  • kstars-data

    Jess:(4:4.14.2-1) Whez:(4:4.8.4-1) data files for KStars desktop planetarium www
  • kxterm

    Jess:(20061220+dfsg3-4.1) CERNLIB data analysis suite - KUIP terminal emulator www
  • Back to top
  • L

  • Rate It
  • lammps

    Jess:(0~20140523.gite5e877d-1) Whez:(0~20120615.gite442279-1) Molecular Dynamics Simulator www
  • last-align

    Jess:(490-1) Whez:(199-1) genome-scale comparison of biological sequences www
  • lbt

    Jess & Whez:(1.2.2-5) converts from LTL formulas to B├╝chi automata www
  • lhapdf-pdfsets-minimal

    Jess:(5.9.1-3) Whez:(5.8.7+repack-1) Minimal PDF Sets of LHAPDF www
  • libadios-bin

    Jess:(1.7.0-4) ADIOS Adaptable IO system for simulations - binaries www
  • libadios-examples

    Jess:(1.7.0-4) ADIOS Adaptable IO system for simulations - exampes www
  • libball1.4

    Jess:(1.4.2+20140406-1+b1) Whez:(1.4.1+20111206-4) Biochemical Algorithms Library www
  • libball1.4-data

    Jess:(1.4.2+20140406-1) Whez:(1.4.1+20111206-4) Biochemical Algorithms Library www
  • libballview1.4

    Jess:(1.4.2+20140406-1+b1) Whez:(1.4.1+20111206-4) Biochemical Algorithms Library, VIEW framework www
  • libcamitk3

    Jess:(3.3.2-2) Computer Assisted Medical Intervention Tool Kit - runtime www
  • libcamitk3-data

    Jess:(3.3.2-2) Computer Assisted Medical Intervention Tool Kit - data www
  • libcassie1

    Jess:(1.0.1+dfsg-3) library implementating search algorithms www
  • libclhep2.1

    Jess:(2.1.4.1-1.1) Whez:(2.1.2.3-1) CLHEP: A Class Library for High Energy Physics www
  • libclinica0

    Jess:(0.3.0-1) Whez:(0.2.1~dfsg-1) Simple medical records manager (shared library) www
  • libdynamicedt3d1.6

    Jess:(1.6.8+dfsg-1) Incrementally updatable Euclidean distance transform library www
  • libej0

    Jess:(3.2.0-1) hardware & software framework for developing science experiments www
  • libgfsgl0

    Jess:(20121130+dfsg-1+b1) graphical viewer for Gerris simulation files. Shared library www
  • libghemical-data

    Jess & Whez:(3.0.0-2) Molecular Modelling Library (data files) www
  • libgnuradio-fcdproplus0

    Jess:(3.7.11-3) Funcube Dongle Pro Plus controller for GNU Radio www
  • libgrib-api-data

    Jess & Whez:(1.8.0.1-1) grib_api definition files www
  • libgrits5

    Jess:(0.8.1-1) Grits is a Virtual Globe library www
  • libgyoto2

    Jess:(0.2.3-1) General relativistic geodesic integration and ray-tracing www
  • libkst2core2

    Jess:(2.0.3-3) Whez:(2.0.3-1.3) kst core library www
  • libkst2math2

    Jess:(2.0.3-3) Whez:(2.0.3-1.3) kst math library www
  • libkst2widgets2

    Jess:(2.0.3-3) Whez:(2.0.3-1.3) kst widgets library www
  • liblas-bin

    Jess:(1.8.0-1) Whez:(1.2.1-5) ASPRS LiDAR data translation toolset www
  • libliggghts3

    Jess:(3.0.3+repack-2) Open Source DEM Particle Simulation Software. Shared library www
  • liblinear-tools

    Jess:(1.8+dfsg-4) Whez:(1.8+dfsg-1) Standalone applications for LIBLINEAR www
  • libmed-tools

    Jess:(3.0.6-7) Whez:(3.0.3-3) Runtime tools to handle MED files www
  • libncarg-bin

    Jess:(6.2.0-3+b1) NCAR command-language library - development tools www
  • libncarg-data

    Jess:(6.2.0-3) NCAR command-language library - Data www
  • libocas-tools

    Jess:(0.97-1) Whez:(0.93-1) Standalone applications implementing the OCAS solver www
  • liboctomap1.6

    Jess:(1.6.8+dfsg-1) 3D occupancy grid mapping approach library for mapping www
  • liboctovis1.6

    Jess:(1.6.8+dfsg-1) Visualization library for OctoMap www
  • libopenmeeg1

    Jess:(2.0.0.dfsg-5.1) Whez:(2.0.0.dfsg-5) library for solving EEG and MEG forward and inverse problems www
  • libpwiz-tools

    Jess:(3.0.6585-2) ProteoWizard command line tools www
  • libqgis-customwidgets2.4.0

    Jess:(2.4.0-1) QGIS custom widgets for Qt Designer www
  • libqtpropertybrowser3

    Jess:(3.3.2-2) Qt Property Browser Library - runtime www
  • libroot-graf2d-postscript5.34

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Postscript/PDF renderer library for ROOT www
  • libroot-proof-proofplayer5.34

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) PROOF plugin for ROOT www
  • libroot-proof5.34

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) PROOF library for ROOT www
  • librsl1

    Jess:(1.43-1) Whez:(1.42-2) TRMM Radar Software Library www
  • libsilo-bin

    Jess:(4.9.1-3+b1) Whez:(4.8-13) Utilities to manipulate libsilo files www
  • libsimgrid3.11

    Jess:(3.11.1-9) Toolkit for scalable simulation of distributed applications www
  • libstxxl1

    Jess:(1.4.0-3) Whez:(1.3.1-4) C++ Standard Template Library for extra large datasets www
  • libxy-bin

    Jess:(1.3-1) Whez:(0.8-1) xylib - utilities www
  • libyade

    Jess:(1.12.0-2) Platform for discrete element modeling. Libraries www
  • liggghts

    Jess:(3.0.3+repack-2) Whez:(1.5.3-1) Open Source DEM Particle Simulation Software. www
  • litl-tools

    Jess:(0.1.5+dfsg-2) Lightweight Trace Library - tools www
  • logcentral

    Jess & Whez:(2.7-1) Logging service for distributed applications www
  • logcentral-tools

    Jess & Whez:(2.7-1) Logging service for distributed applications www
  • logol

    Jess:(1.7.0-2) Pattern matching tool using Logol language www
  • logol-bin

    Jess:(1.7.0-2) Pattern matching tool using Logol language www
  • loki

    Jess:(2.4.7.4-5) Whez:(2.4.7.4-4) MCMC linkage analysis on general pedigrees
  • looptools

    Jess:(2.8-1) Whez:(2.7-1) Integral Evaluator of One-loop Feynman Diagram www
  • ltrsift

    Jess:(1.0.2-1) postprocessing and classification of LTR retrotransposons www
  • ltrsift-examples

    Jess:(1.0.2-1) example data for LTRsift www
  • lutefisk

    Jess:(1.0.7+dfsg-4) Whez:(1.0.5a.cleaned-1) de novo interpretation of peptide CID spectra www
  • Back to top
  • M

  • Rate It
  • macs

    Jess:(2.0.9.1-1) Model-based Analysis of ChIP-Seq on short reads sequencers www
  • mafft

    Jess:(7.205-1) Whez:(6.864-1) Multiple alignment program for amino acid or nucleotide sequences www
  • magics++

    Jess:(2.22.7.dfsg.1-4) Whez:(2.14.11-4) Executables for the magics++ library www
  • mapsembler2

    Jess:(2.1.6+dfsg-1) bioinformatics targeted assembly software www
  • maq

    Jess & Whez:(0.7.1-5) maps short fixed-length polymorphic DNA sequence reads to reference sequences www
  • maqview

    Jess:(0.2.5-6) Whez:(0.2.5-4) graphical read alignment viewer for short gene sequences www
  • massxpert

    Jess:(3.4.1-1) Whez:(3.2.3-1) linear polymer mass spectrometry software www
  • massxpert-data

    Jess:(3.4.1-1) Whez:(3.2.3-1) linear polymer mass spectrometry software - arch-indep data www
  • maude

    Jess:(2.6-6) Whez:(2.6-2) high-performance logical framework www
  • mayavi2

    Jess:(4.3.1-3.1) Whez:(4.1.0-1) scientific visualization package for 2-D and 3-D data www
  • mbt

    Jess:(3.2.10-4) Whez:(3.2.8-1) memory-based tagger-generator and tagger www
  • mbtserver

    Jess:(0.7-3) Whez:(0.5-2) Server extensions for the MBT tagger www
  • meep

    Jess:(1.2.1-2+b1) Whez:(1.1.1-8+deb7u1) software package for FDTD simulation www
  • meep-lam4

    Jess:(1.2.1-3+b1) Whez:(1.1.1-10~deb7u1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-mpi-default

    Jess:(1.2.1-2+b1) Whez:(1.1.1-10~deb7u1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-mpich2

    Jess:(1.2.1-3+b1) Whez:(1.1.1-10~deb7u1) software package for FDTD simulation, parallel (OpenMPI) version www
  • meep-openmpi

    Jess:(1.2.1-2+b1) Whez:(1.1.1-9~deb7u2) software package for FDTD simulation, parallel (OpenMPI) version www
  • melting

    Jess:(4.3.1+dfsg-1) Whez:(4.3c-2) compute the melting temperature of nucleic acid duplex www
  • melting-gui

    Jess:(4.3.1+dfsg-1) Whez:(4.3c-2) graphical interface to compute the melting temperature of nucleic acid duplex www
  • merkaartor

    Jess:(0.18.1-3+b5) Whez:(0.18.1-3) map editor for OpenStreetMap.org www
  • metastudent

    Jess:(1.0.11-2) predictor of Gene Ontology terms from protein sequence www
  • metastudent-data

    Jess:(1.0.1-2) predictor of Gene Ontology terms from protein sequence - data files www
  • metastudent-data-2

    Jess:(1.0.0-1) predictor of Gene Ontology terms from protein sequence - data #2 www
  • metview

    Jess:(4.4.8+dfsg.1-8) Interactive data visualization and analysis environment, www
  • metview-data

    Jess:(4.4.8+dfsg.1-8) Data needed for the Metview data analysis environment www
  • mialmpick

    Jess:(0.2.10-2) Tools for landmark picking in 3D volume data sets www
  • microbiomeutil

    Jess:(20101212+dfsg-1) Microbiome Analysis Utilities www
  • microbiomeutil-data

    Jess:(20101212+dfsg-1) Reference 16S sequences and NAST-alignments used by microbiomeutil tools www
  • microhope

    Jess:(3.2.0-1) hardware & software framework to learn microcontrollers www
  • minc-tools

    Jess:(2.2.00-6) Whez:(2.1.10-1) MNI medical image format tools www
  • minia

    Jess:(1.6088-1) short-read biological sequence assembler www
  • minisat

    Jess:(1:2.2.1-5) Whez:(1:2.2.1-3) Fast and lightweight SAT solver www
  • minisat+

    Jess & Whez:(1.0-2) solver for pseudo-Boolean constraints www
  • mipe

    Jess & Whez:(1.1-4) Tools to store PCR-derived data www
  • mira-assembler

    Jess:(4.0.2-1) Whez:(3.4.0.1-3) Whole Genome Shotgun and EST Sequence Assembler www
  • mira-examples

    Jess:(4.0.2-1) Whez:(3.4.0.1-3) files to experiment with the mira assembler www
  • mitools

    Jess:(1.8.8-1) Whez:(1.8.5-2) view, convert and perform basic maths with medical image datasets www
  • mldemos

    Jess:(0.5.1-3) Machine Learning Demos (MLDemos) with Visualization www
  • mlpack-bin

    Jess:(1.0.10-1) intuitive, fast, scalable C++ machine learning library (binaries) www
  • mlv-smile

    Jess & Whez:(1.47-3) Find statistically significant patterns in sequences www
  • mmass

    Jess:(5.5.0-4) Whez:(5.1.0-2) Mass spectrometry tool for proteomics www
  • mmass-modules

    Jess:(5.5.0-4) Whez:(5.1.0-2) Mass spectrometry tool for proteomics - extension modules www
  • mobyle

    Jess:(1.5.3+dfsg-1) Whez:(1.0.6~dfsg-1) Web portal that provides web forms for command-line software www
  • mobyle-programs

    Jess:(5.1.2-1) Whez:(4.0-1) Program descriptions for the mobyle portal www
  • mobyle-tutorials

    Jess:(1.5.0-1) program tutorials for the mobyle portal www
  • mobyle-utils

    Jess:(1.5.3+dfsg-1) Whez:(1.0.6~dfsg-1) binary tools used by Mobyle www
  • molds

    Jess:(0.3.1-1) Semi-empirical electronic structure and molecular dynamics www
  • mona

    Jess:(1.4-15-1) Whez:(1.4-13-3) theorem prover based on automata www
  • montecarlo-base

    Jess:(20061220+dfsg3-3) Whez:(20061220+dfsg3-2) [Physics] Common files for CERNLIB Monte Carlo libraries www
  • montecarlo-data

    Jess:(20061220+dfsg3-3) Whez:(20061220+dfsg3-2) [Physics] data for CERNLIB Monte Carlo libraries www
  • mopac7-bin

    Jess:(1.15-6) Whez:(1.15-5) Semi-empirical Quantum Chemistry Library (binaries) www
  • morse-simulator

    Jess:(1.2.1-2) Whez:(0.5.2-1) Multi-OpenRobot Simulation Engine www
  • morse-simulator-data

    Jess:(1.2.1-2) Whez:(0.5.2-1) Multi-OpenRobot Simulation Engine www
  • mothur

    Jess:(1.33.3+dfsg-2) Whez:(1.24.1-1) sequence analysis suite for research on microbiota www
  • mothur-mpi

    Jess:(1.33.3+dfsg-2) mpi-enabled binary for mothur www
  • mozilla-biofox

    Jess & Whez:(1.6-1) extension of bioinformatics tools to Iceape and Iceweasel browsers www
  • mpb

    Jess:(1.5-2+b1) Whez:(1.4.2-18) MIT Photonic-Bands www
  • mpb-mpi

    Jess:(1.5-2+b1) Whez:(1.4.2-18) MIT Photonic-Bands, parallel (mpich) version www
  • mpb-scm

    Jess:(1.5-2) MIT Photonic-Bands initialisation files www
  • mpich2python

    Jess:(2.9.4-3) Whez:(2.8-4) MPI-enhanced Python interpreter (MPICH2 based version) www
  • mpqc

    Jess:(2.3.1-16) Whez:(2.3.1-14) Massively Parallel Quantum Chemistry Program www
  • mpqc-openmpi

    Jess:(2.3.1-16) Whez:(2.3.1-14) Massively Parallel Quantum Chemistry Program (OpenMPI transitional package) www
  • mpqc-support

    Jess:(2.3.1-16) Whez:(2.3.1-14) Massively Parallel Quantum Chemistry Program (support tools) www
  • mrbayes

    Jess:(3.2.3+dfsg-1) Whez:(3.2.1+dfsg-1) Bayesian Inference of Phylogeny www
  • mrbayes-mpi

    Jess:(3.2.3+dfsg-1) Whez:(3.2.1+dfsg-1) Bayesian Inference of Phylogeny - mpi version www
  • mriconvert

    Jess:(1:2.0.7-2) Whez:(2.0.235-1) medical image file conversion utility www
  • mricron

    Jess:(0.20140804.1~dfsg.1-1) Whez:(0.20120505.1~dfsg.1-1) magnetic resonance image conversion, viewing and analysis www
  • mricron-data

    Jess:(0.20140804.1~dfsg.1-1) Whez:(0.20120505.1~dfsg.1-1) data files for MRIcron www
  • mrpt-apps

    Jess:(1:1.2.2-1.1) Mobile Robot Programming Toolkit - Console and GUI applications www
  • mrtrix

    Jess:(0.2.12-1) Whez:(0.2.10-2) diffusion-weighted MRI white matter tractography www
  • mummer

    Jess & Whez:(3.23~dfsg-2) Efficient sequence alignment of full genomes www
  • muscle

    Jess & Whez:(1:3.8.31-1) Multiple alignment program of protein sequences www
  • music-bin

    Jess:(1.0.7-1.2+b1) Whez:(1.0.7-1.2) Multi-Simulation Coordinator for MPI -- Utilities www
  • mustang

    Jess:(3.2.2-1) Whez:(3.2.1-3) multiple structural alignment of proteins www
  • mustang-testdata

    Jess:(3.2.2-1) Whez:(3.2.1-3) multiple structural alignment of proteins, test data www
  • Back to top
  • N

  • Rate It
  • nast-ier

    Jess:(20101212+dfsg-1) NAST-based DNA alignment tool www
  • nautic

    Jess:(1.5-1.1) computation of observer position in astro-navigation www
  • ncbi-blast+

    Jess:(2.2.29-3) Whez:(2.2.26-3) next generation suite of BLAST sequence search tools www
  • ncbi-blast+-legacy

    Jess:(2.2.29-3) Whez:(2.2.26-3) NCBI Blast legacy call script www
  • ncbi-epcr

    Jess:(2.3.12-1-2) Whez:(2.3.12-1-1) Tool to test a DNA sequence for the presence of sequence tagged sites www
  • ncbi-rrna-data

    Jess:(6.1.20120620-8) Whez:(6.1.20120620-2) large rRNA BLAST databases distributed with the NCBI toolkit www
  • ncbi-seg

    Jess:(0.0.20000620-2) tool to mask segments of low compositional complexity in amino acid sequences www
  • ncbi-tools-bin

    Jess:(6.1.20120620-8) Whez:(6.1.20120620-2) NCBI libraries for biology applications (text-based utilities) www
  • ncbi-tools-x11

    Jess:(6.1.20120620-8) Whez:(6.1.20120620-2) NCBI libraries for biology applications (X-based utilities) www
  • ncl-ncarg

    Jess:(6.2.0-3+b1) NCAR Command Language and NCAR graphics www
  • nco

    Jess:(4.4.2-1) Whez:(4.0.9-1) Command-line operators to analyze netCDF files www
  • ncoils

    Jess:(2002-4) Whez:(2002-3) coiled coil secondary structure prediction www
  • ncview

    Jess & Whez:(1.93g-1) A X11 visual browser for NetCDF format files www
  • neobio

    Jess:(0.0.20030929-1.1) Whez:(0.0.20030929-1) computes alignments of amino acid and nucleotide sequences www
  • netcdf-bin

    Jess:(1:4.1.3-7.2) Whez:(1:4.1.3-6) Programs for reading and writing NetCDF files www
  • nexus-tools

    Jess:(4.3.2-svn1921-2+b1) Whez:(4.2.1-svn1614-1) NeXus scientific data file format - applications www
  • nifti2dicom

    Jess:(0.4.9-1) convert 3D medical images to DICOM 2D series www
  • nifti2dicom-data

    Jess:(0.4.9-1) data files for nifti2dicom www
  • njplot

    Jess:(2.4-2) Whez:(2.4-1) phylogenetic tree drawing program www
  • node-sphericalmercator

    Jess:(1.0.1-2) Spherical Mercator projection support for NodeJS www
  • node-srs

    Jess:(0.3.2+ds1-1+b1) spatial reference library for Node.js www
  • norsnet

    Jess:(1.0.17-1) tool to identify unstructured loops in proteins www
  • norsp

    Jess:(1.0.6-1) predictor of non-regular secondary structure www
  • numdiff

    Jess:(5.8.1-1) Whez:(5.6.0-1) Compare similar files with numeric fields www
  • nwchem

    Jess:(6.5+r26243-4) Whez:(6.1-6) High-performance computational chemistry software www
  • nwchem-data

    Jess:(6.5+r26243-4) Whez:(6.1-6) High-performance computational chemistry software (data files) www
  • Back to top
  • O

  • Rate It
  • oar-api

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) transitional dummy package www
  • oar-common

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler common package www
  • oar-node

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler node package www
  • oar-restful-api

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR web services www
  • oar-server

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler server package www
  • oar-server-mysql

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler MySQL server backend package www
  • oar-server-pgsql

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler PostgreSQL server backend package www
  • oar-user

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler user package www
  • oar-user-mysql

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler MySQL user backend package www
  • oar-user-pgsql

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler PostgreSQL user backend package www
  • oar-web-status

    Jess:(2.5.4-2+deb8u1) Whez:(2.5.2-3+deb7u1) OAR batch scheduler visualization tool package www
  • obdgpslogger

    Jess:(0.16-1.2+b1) Whez:(0.16-1.2) suite of tools to log OBDII and GPS data www
  • objcryst-fox

    Jess:(1.9.6.0-2.1) Whez:(1.9.6.0-2) Free Objects for Xtallography www
  • oce-draw

    Jess:(0.15-5) Whez:(0.9.1-3) OpenCASCADE Community Edition CAE platform shared library www
  • octave-biosig

    Jess:(1.3.0-2+b2) Whez:(1.3.0-2) Octave bindings for BioSig library www
  • octave-gdf

    Jess:(0.1.2-2+b2) Whez:(0.1.2-2) IO library for the GDF -- Octave interface www
  • octave-lhapdf

    Jess:(5.9.1-3+b1) Whez:(5.8.7+repack-1) Octave Bindings for LHAPDF www
  • octave-psychtoolbox-3

    Jess:(3.0.11.20140816.dfsg1-1) Whez:(3.0.9+svn2579.dfsg1-1) toolbox for vision research -- Octave bindings www
  • octomap-tools

    Jess:(1.6.8+dfsg-1) Tools for 3D occupancy grid mapping www
  • octovis

    Jess:(1.6.8+dfsg-1) Visualization tool for OctoMap www
  • odin

    Jess:(1.8.8-1) Whez:(1.8.5-2) develop, simulate and run magnetic resonance sequences www
  • ogdi-bin

    Jess:(3.2.0~beta2-7.1) Whez:(3.2.0~beta2-7) Open Geographic Datastore Interface Library -- utilities www
  • openbabel

    Jess:(2.3.2+dfsg-2) Whez:(2.3.1+dfsg-4) Chemical toolbox utilities (cli) www
  • openbabel-gui

    Jess:(2.3.2+dfsg-2) Whez:(2.3.1+dfsg-4) Chemical toolbox utilities (graphical user interface) www
  • opencascade-draw

    Jess & Whez:(6.5.0.dfsg-2) OpenCASCADE CAE platform shared library www
  • opencaster

    Jess:(3.2.2+dfsg-1) MPEG2 transport stream data generator and packet manipulator www
  • openmeeg-tools

    Jess:(2.0.0.dfsg-5.1) Whez:(2.0.0.dfsg-5) openmeeg library -- command line tools www
  • openmolar

    Jess:(0.6.0-1) dental practice management software www
  • openmpipython

    Jess:(2.9.4-3) MPI-enhanced Python interpreter (OpenMPI based version) www
  • openms

    Jess:(1.11.1-5) package for LC/MS data management and analysis www
  • openms-common

    Jess:(1.11.1-5) package for LC/MS data management and analysis - shared data www
  • openmx

    Jess:(3.7.6-1) Whez:(3.5-1) package for nano-scale material simulations www
  • openmx-data

    Jess:(3.7.6-1) package for nano-scale material simulations (data) www
  • openrocket

    Jess:(14.06) Whez:(12.03-1) Model Rocket Simulator www
  • opensesame

    Jess:(0.27.4-2) graphical experiment builder for the social sciences www
  • openturns-examples

    Jess:(1.3-3) Whez:(1.0-4) examples of OpenTURNS functionalities www
  • openturns-validation

    Jess:(1.3-3) Whez:(1.0-4) validation files for OpenTURNS www
  • openuniverse

    Jess & Whez:(1.0beta3.1+dfsg-3) 3D Universe Simulator www
  • openuniverse-common

    Jess & Whez:(1.0beta3.1+dfsg-3) 3D Universe Simulator data files www
  • openwalnut-modules

    Jess:(1.4.0~rc1+hg3a3147463ee2-1) Whez:(1.2.5-1.1) Loaders, algorithms and visualization modules for OpenWalnut www
  • openwalnut-qt4

    Jess:(1.4.0~rc1+hg3a3147463ee2-1) Whez:(1.2.5-1.1) Qt based user interface for OpenWalnut www
  • opj2dat

    Jess & Whez:(20080225-2.1) OriginLab Origin project files to data files converter www
  • optgeo

    Jess:(2.21-3) Whez:(2.11-3) simulator for geometrical optics www
  • opticalraytracer

    Jess & Whez:(3.2-1.1) Virtual lens design workshop www
  • origami

    Jess & Whez:(0.7.4-1) command-line management tool for Folding @ Home clients www
  • orthanc

    Jess:(0.8.4+dfsg-1) RESTful DICOM server for healthcare and medical research www
  • ossim-core

    Jess:(1.8.16-3) Whez:(1.7.21-4) The OSSIM core utilities www
  • otf-trace

    Jess:(1.12.5+dfsg-1) Whez:(1.10.2+dfsg-2) Open Trace Format support library - development files www
  • ovito

    Jess:(0.9.5-4) Whez:(0.9.5-2) visualization and analysis tool for atomistic simulation data www
  • Back to top
  • P

  • Rate It
  • p4vasp

    Jess:(0.3.29+dfsg-1) visualization suite for the Vienna Ab-initio Simulation Package (VASP) www
  • paje.app

    Jess:(1.98-1+b3) Whez:(1.98-1) generic visualization tool (Gantt chart and more)
  • paraclu

    Jess:(9-1) Parametric clustering of genomic and transcriptomic features www
  • paraview

    Jess:(4.1.0+dfsg+1-1) Whez:(3.14.1-6) Parallel Visualization Application www
  • parsinsert

    Jess:(1.04-1) Parsimonious Insertion of unclassified sequences into phylogenetic trees www
  • paw

    Jess:(1:2.14.04.dfsg.2-9+b1) Physics Analysis Workstation - a graphical analysis program www
  • paw++

    Jess:(1:2.14.04.dfsg.2-9+b1) Physics Analysis Workstation (Lesstif-enhanced version) www
  • paw-common

    Jess:(1:2.14.04.dfsg.2-9) Whez:(1:2.14.04.dfsg.2-8) Physics Analysis Workstation (common files) www
  • paw-demos

    Jess:(1:2.14.04.dfsg.2-9) Whez:(1:2.14.04.dfsg.2-8) Physics Analysis Workstation examples and tests www
  • pdb2pqr

    Jess:(1.9.0+dfsg-1) Whez:(1.8-1) Preparation of protein structures for electrostatics calculations www
  • pegasus-wms

    Jess:(4.4.0+dfsg-4) Whez:(4.0.1+dfsg-8) Scientific workflow management system for HTCondor www
  • perlprimer

    Jess:(1.1.21-2) Whez:(1.1.21-1) Graphical design of primers for PCR www
  • perm

    Jess:(0.4.0-1) efficient mapping of short reads with periodic spaced seeds www
  • phylip

    Jess:(1:3.696+dfsg-1) package of programs for inferring phylogenies www
  • phyml

    Jess:(2:20120412-2) Whez:(2:20110919-1) Phylogenetic estimation using Maximum Likelihood www
  • phyutility

    Jess:(2.7.3-1) simple analyses or modifications on both phylogenetic trees and data matrices www
  • picard-tools

    Jess:(1.113-1) Whez:(1.46-1) Command line tools to manipulate SAM and BAM files www
  • picosat

    Jess:(960-1) Whez:(936-4) SAT solver with proof and core support www
  • pktools

    Jess:(2.5.3-1+b1) GDAL add-on tools to perform useful raster processing www
  • planets

    Jess:(0.1.13-14) Whez:(0.1.13-13) Gravitation simulation of planetary bodies www
  • plastimatch

    Jess:(1.5.16+dfsg-2) Whez:(1.5.11+dfsg0-1) medical image reconstruction and registration www
  • plink

    Jess & Whez:(1.07-3) whole-genome association analysis toolset www
  • poa

    Jess & Whez:(2.0+20060928-3) Partial Order Alignment for multiple sequence alignment www
  • populations

    Jess & Whez:(1.2.33+svn0120106-2.1) population genetic software www
  • pp-popularity-contest

    Jess:(1.0.6-2+b1) Whez:(1.0.5-1) PredictProtein popularity contest www
  • praat

    Jess:(5.4.0-1) Whez:(5.3.16-1) program for speech analysis and synthesis www
  • prank

    Jess:(0.0.140110-1) Probabilistic Alignment Kit for DNA, codon and amino-acid sequences www
  • predictnls

    Jess:(1.0.20-1) prediction and analysis of protein nuclear localization signals www
  • predictprotein

    Jess:(1.1.06-1) suite of protein sequence analysis tools www
  • prime-phylo

    Jess:(1.0.11-2) bayesian estimation of gene trees taking the species tree into account www
  • primer3

    Jess:(2.3.6-1) Whez:(2.2.3-1) Tool to design flanking oligo nucleotides for DNA amplification www
  • proalign

    Jess:(0.603-1) Probabilistic multiple alignment program www
  • probabel

    Jess:(0.4.3-2) Toolset for Genome-Wide Association Analysis www
  • probabel-examples

    Jess:(0.4.3-2) Example files for ProbABEL www
  • probalign

    Jess:(1.4-3) Whez:(1.4-2) multiple sequence alignment using partition function posterior probabilities www
  • probcons

    Jess & Whez:(1.12-9) PROBabilistic CONSistency-based multiple sequence alignment www
  • probcons-extra

    Jess & Whez:(1.12-9) Extra programs from the probcons package www
  • proda

    Jess & Whez:(1.0-8) multiple alignment of protein sequences www
  • prodigal

    Jess:(1:2.6.1-1) Microbial (bacterial and archaeal) gene finding program www
  • profbval

    Jess:(1.0.22-1) predictor of flexible/rigid protein residues from sequence www
  • profisis

    Jess:(1.0.11-1) prediction of protein-protein interaction sites from sequence www
  • profnet-bval

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profbval www
  • profnet-chop

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profchop www
  • profnet-con

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profcon www
  • profnet-isis

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profisis www
  • profnet-md

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for metadisorder www
  • profnet-norsnet

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for norsnet www
  • profnet-prof

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profacc www
  • profnet-snapfun

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for snapfun www
  • profphd

    Jess:(1.0.40-1) Whez:(1.0.39-1) secondary structure and solvent accessibility predictor www
  • profphd-net

    Jess:(1.0.22-2) Whez:(1.0.21-1+wheezy1) neural network architecture for profphd www
  • profphd-utils

    Jess:(1.0.10-1) Whez:(1.0.9-1) profphd helper utilities convert_seq and filter_hssp www
  • proftmb

    Jess:(1.1.12-2) Whez:(1.1.10-1) per-residue prediction of bacterial transmembrane beta barrels www
  • proj-bin

    Jess:(4.8.0-5) Whez:(4.7.0-2) Cartographic projection library (tools) www
  • prooftree

    Jess:(0.12-1+b1) proof-tree visualization for Proof General www
  • psi3

    Jess:(3.4.0-5) Whez:(3.4.0-4) Quantum Chemical Program Suite www
  • psi4

    Jess:(4.0~beta5+dfsg-2) Quantum Chemical Program Suite www
  • psi4-data

    Jess:(4.0~beta5+dfsg-2) Quantum Chemical Program Suite (data files) www
  • psychopy

    Jess:(1.79.00+git16-g30c9343.dfsg-1.1) Whez:(1.73.06.dfsg-1) environment for creating psychology stimuli in Python www
  • psychtoolbox-3-common

    Jess:(3.0.11.20140816.dfsg1-1) Whez:(3.0.9+svn2579.dfsg1-1) toolbox for vision research -- arch/interpreter independent part www
  • psychtoolbox-3-lib

    Jess:(3.0.11.20140816.dfsg1-1) Whez:(3.0.9+svn2579.dfsg1-1) toolbox for vision research -- arch-specific parts www
  • pyfai

    Jess:(0.10.2-1) Whez:(0.3.5-1) Fast Azimuthal Integration scripts www
  • pyformex

    Jess & Whez:(0.8.6-4) program to create 3D geometry from Python scripts. www
  • pyformex-lib

    Jess:(0.8.6-4+b1) Whez:(0.8.6-4) program to create 3D geometry from Python scripts. www
  • pymca

    Jess:(4.7.4+dfsg-1) Whez:(4.6.0-2) Python applications and toolkit for X-ray fluorescence analysis www
  • pymca-data

    Jess:(4.7.4+dfsg-1) Whez:(4.6.0-2) Architecture independent data files for PyMca www
  • pymol

    Jess:(1.7.2.1-1) Whez:(1.5.0.1-2) 100 ,Molecular Graphics System www
  • pythia8-data

    Jess:(8.1.86-1) Whez:(8.1.65-1) PYTHIA8 data files www
  • python-expyriment

    Jess:(0.7.0+git34-g55a4e7e-3) Python library for cognitive and neuroscientific experiments www
  • python3-fitbitscraper

    Jess:(0.1-1) Python library for scraping the FitBit website for data www
  • python3-morse-simulator

    Jess:(1.2.1-2) Multi-OpenRobot Simulation Engine www
  • Back to top
  • Q

  • Rate It
  • qfits-tools

    Jess:(6.2.0-8) Whez:(6.2.0-5) FITS manipulation tools www
  • qgis

    Jess:(2.4.0-1) Geographic Information System (GIS) www
  • qgis-api-doc

    Jess:(2.4.0-1) Whez:(1.7.4+1.7.5~20120320-1.1) QGIS API documentation www
  • qgis-common

    Jess:(2.4.0-1) Whez:(1.7.4+1.7.5~20120320-1.1) QGIS - architecture-independent data www
  • qgis-mapserver

    Jess:(2.4.0-1) Web Map Server for QGIS www
  • qgis-plugin-globe

    Jess:(2.4.0-1) OSG globe plugin for QGIS www
  • qgis-plugin-globe-common

    Jess:(2.4.0-1) OSG globe plugin for QGIS - architecture-independent data www
  • qgis-plugin-grass

    Jess:(2.4.0-1) GRASS plugin for QGIS www
  • qgis-plugin-grass-common

    Jess:(2.4.0-1) Whez:(1.7.4+1.7.5~20120320-1.1) GRASS plugin for QGIS - architecture-independent data www
  • qgis-providers

    Jess:(2.4.0-1) collection of data providers to QGIS www
  • qgis-providers-common

    Jess:(2.4.0-1) Whez:(1.7.4+1.7.5~20120320-1.1) collection of data providers to QGIS - architecture-independent files www
  • qgis-sqlanywhere

    Jess:(2.4.0-1) QGIS sql anywhere plugin and provider www
  • qiime

    Jess:(1.8.0+dfsg-4+b1) Whez:(1.4.0-2) Quantitative Insights Into Microbial Ecology www
  • qiime-data

    Jess:(1.8.0+dfsg-4) Quantitative Insights Into Microbial Ecology (supporting data) www
  • qlandkartegt

    Jess:(1.7.7-3) Whez:(1.5.0~dfsg1-1+deb7u1) GPS mapping (GeoTiff and vector) and GPSr management www
  • qmapshack

    Jess:(0.6.0-1) GPS mapping (GeoTiff and vector) and GPSr management www
  • qmc

    Jess & Whez:(0.94-3) Quine McClusky Simplification Tool
  • qnifti2dicom

    Jess:(0.4.9-1) convert 3D medical images to DICOM 2D series (gui) www
  • qrisk2

    Jess:(0.0.r31-1) cardiovascular disease risk calculator www
  • qtdmm

    Jess & Whez:(0.8.13-3) GUI for digital multimeter www
  • qthid-fcd-controller

    Jess:(4.1-3) Whez:(3.1-5) Funcube Dongle controller www
  • quantum-espresso

    Jess:(5.1+dfsg-3) Whez:(5.0-1) Electronic-Structure and Ab-Initio Molecular Dynamics Suite www
  • quantum-espresso-data

    Jess:(5.1+dfsg-3) Whez:(5.0-1) Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation) www
  • quitcount

    Jess:(3.1.3-2) Whez:(2.0-1) Small tool which may help yourself quit smoking www
  • qutemol

    Jess:(0.4.1~cvs20081111-3.2) Whez:(0.4.1~cvs20081111-2) interactive visualization of macromolecules www
  • Back to top
  • R

  • Rate It
  • rasmol

    Jess:(2.7.5.2-2) Whez:(2.7.5.2-1) Visualize biological macromolecules www
  • raster3d

    Jess:(3.0-3-1) Whez:(3.0-2-4) tools for generating images of proteins or other molecules www
  • rate4site

    Jess:(3.0.0-1) detector of conserved amino-acid sites www
  • ray

    Jess:(2.3.1-1) de novo genome assemblies of next-gen sequencing data www
  • ray-extra

    Jess:(2.3.1-1) Scripts and XSL sheets for post-processing for ray www
  • rdkit-data

    Jess:(201403-1) Whez:(201203-3) Collection of cheminformatics and machine-learning software (data files) www
  • readseq

    Jess:(1-11) Whez:(1-9) Conversion between sequence formats www
  • reprof

    Jess & Whez:(1.0.1-1) protein secondary structure and accessibility predictor www
  • rivet

    Jess:(1.8.3-1.1) Whez:(1.8.0-1) Robust Independent Validation of Experiment and Theory www
  • rivet-plugins

    Jess:(1.8.3-1.1+b1) Whez:(1.8.0-1) Analysis plugins of Rivet www
  • rivet-plugins-data

    Jess:(1.8.3-1.1) Whez:(1.8.0-1) Data files of Rivet analysis plugins www
  • rivet-plugins-dev

    Jess:(1.8.3-1.1) Whez:(1.8.0-1) Template generator of Rivet analysis plugin www
  • rivet-root-converter

    Jess:(1.8.3-1.1) Whez:(1.8.0-1) Rivet and ROOT file format converter www
  • rnahybrid

    Jess:(2.1.1-2) Whez:(2.1.1-1) Fast and effective prediction of microRNA/target duplexes www
  • robot-player

    Jess:(3.0.2+dfsg-4.1+rpi1) Whez:(3.0.2+dfsg-4) Networked server for robots and sensors www
  • robot-player-dev

    Jess:(3.0.2+dfsg-4.1+rpi1) Whez:(3.0.2+dfsg-4) Networked server for robots and sensors - development package www
  • root-plugin-geom-gdml

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) GDML import/export module for ROOT geometries www
  • root-plugin-geom-geombuilder

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Geometry builder plugin for ROOT www
  • root-plugin-geom-geompainter

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Geometry painter plugin for ROOT www
  • root-plugin-graf2d-asimage

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) AfterImage plugin for ROOT www
  • root-plugin-graf2d-qt

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Graf2d Qt plugin for ROOT www
  • root-plugin-graf2d-x11

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) X window system plugin for ROOT www
  • root-plugin-graf3d-x3d

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) X 3D plugin for ROOT www
  • root-plugin-gui-fitpanel

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) GUI element for fits plugin for ROOT www
  • root-plugin-gui-guibuilder

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) GUI editor plug-in for ROOT www
  • root-plugin-gui-qt

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Qt plugin for ROOT www
  • root-plugin-gui-sessionviewer

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) GUI to browse an interactive PROOF session www
  • root-plugin-hist-hbook

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Hbook plugin for ROOT www
  • root-plugin-hist-histpainter

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Histogram painter plugin for ROOT www
  • root-plugin-hist-spectrumpainter

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Spectrum painter plugin for ROOT www
  • root-plugin-io-sql

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) SQL plugin for ROOT www
  • root-plugin-io-xml

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) XML reader plugin for ROOT www
  • root-plugin-math-fftw3

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) FFTw plugin for ROOT www
  • root-plugin-math-fumili

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Fumili plugin for ROOT www
  • root-plugin-math-minuit2

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Minuit version 2 plugin for ROOT www
  • root-plugin-montecarlo-pythia8

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Pythia version 8 plugin for ROOT www
  • root-plugin-net-globus

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Globus plugin for ROOT www
  • root-plugin-net-krb5

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Kerberos (version 5) plugin for ROOT www
  • root-plugin-sql-mysql

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) MySQL client plugin for ROOT www
  • root-plugin-sql-odbc

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) ODBC plugin for ROOT www
  • root-plugin-sql-pgsql

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) PostgreSQL client plugin for ROOT www
  • root-plugin-tree-treeviewer

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) GUI to browse a ROOT tree www
  • root-system

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) metapackage to install all ROOT packages www
  • root-system-bin

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Numerical data analysis framework - general applications www
  • root-system-common

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Common files for ROOT www
  • root-system-proofd

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) Parallel ROOt Facility - distributed, parallel computing www
  • root-system-rootd

    Jess:(5.34.19+dfsg-1.2+rpi1) Whez:(5.34.00-2) ROOT remote file server www
  • rtax

    Jess:(0.984-2) Classification of sequence reads of 16S ribosomal RNA gene www
  • Back to top
  • S

  • Rate It
  • saga

    Jess:(2.1.2+dfsg-3) System for Automated Geoscientific Analyses www
  • saint

    Jess:(2.4.0+dfsg-1) Whez:(2.3.3-1) Significance Analysis of INTeractome www
  • salome-kernel

    Jess:(6.5.0-8.1+b1) Numerical simulation pre- and post-processor www
  • samtools

    Jess:(0.1.19-1) Whez:(0.1.18-1) processing sequence alignments in SAM and BAM formats www
  • saods9

    Jess:(7.3.2+repack-1) Whez:(7.0.1+dfsg-1) Image display tool for astronomy www
  • saods9-data

    Jess:(7.3.2+repack-1) Whez:(7.0.1+dfsg-1) Image display tool for astronomy (shared data) www
  • sat4j

    Jess:(2.3.3-1) Whez:(2.3.1-1) Efficient library of SAT solvers in Java www
  • savi

    Jess:(1.4.6-1) Whez:(1.4.5-4) satellite constellation visualisation www
  • sbmltoolbox

    Jess:(4.1.0-1) libsbml toolbox for octave and matlab www
  • science-astronomy

    Jess:(1.4) Whez:(1.0) Debian Science Astronomy packages www
  • science-astronomy-dev

    Jess:(1.4) Whez:(1.0) Debian Science Astronomy-dev packages www
  • science-biology

    Jess:(1.4) Whez:(1.0) Debian Science Biology packages www
  • science-chemistry

    Jess:(1.4) Whez:(1.0) Debian Science Chemistry packages www
  • science-config

    Jess:(1.4) Whez:(1.0) Debian Science Project config package www
  • science-dataacquisition

    Jess:(1.4) Whez:(1.0) Debian Science data acquisition packages www
  • science-dataacquisition-dev

    Jess:(1.4) Whez:(1.0) Debian Science data acquisition development packages www
  • science-distributedcomputing

    Jess:(1.4) Whez:(1.0) Debian Science Distributed Computing packages www
  • science-economics

    Jess:(1.4) Debian Science Economics packages www
  • science-electronics

    Jess:(1.4) Whez:(1.0) Debian Science Electronics packages www
  • science-electrophysiology

    Jess:(1.4) Whez:(1.0) Debian Science packages for Electrophysiology www
  • science-engineering

    Jess:(1.4) Whez:(1.0) Debian Science Engineering packages www
  • science-engineering-dev

    Jess:(1.4) Whez:(1.0) Debian Science Engineering-dev packages www
  • science-financial

    Jess:(1.4) Debian Science financial engineering and computational finance www
  • science-geography

    Jess:(1.4) Whez:(1.0) Debian Science Geography packages www
  • science-geometry

    Jess:(1.4) Debian Science geometry packages www
  • science-highenergy-physics

    Jess:(1.4) Whez:(1.0) Debian Science High Energy Physics packages www
  • science-highenergy-physics-dev

    Jess:(1.4) Whez:(1.0) Debian Science High Energy Physics development packages www
  • science-imageanalysis

    Jess:(1.4) Whez:(1.0) Debian Science image analysis packages www
  • science-linguistics

    Jess:(1.4) Whez:(1.0) Debian Science Linguistics packages www
  • science-logic

    Jess:(1.4) Debian Science Logic packages www
  • science-machine-learning

    Jess:(1.4) Whez:(1.0) Debian Science Machine Learning packages www
  • science-mathematics

    Jess:(1.4) Whez:(1.0) Debian Science Mathematics packages www
  • science-mathematics-dev

    Jess:(1.4) Whez:(1.0) Debian Science Mathematics-dev packages www
  • science-meteorology

    Jess:(1.4) Whez:(1.0) Debian Science Meteorology packages www
  • science-meteorology-dev

    Jess:(1.4) Whez:(1.0) Debian Science Meteorology-dev packages www
  • science-nanoscale-physics

    Jess:(1.4) Whez:(1.0) Debian Science Nanoscale Physics packages www
  • science-nanoscale-physics-dev

    Jess:(1.4) Whez:(1.0) Debian Science Nanoscale Physics development packages www
  • science-neuroscience-cognitive

    Jess:(1.4) Whez:(1.0) Debian Science packages for Cognitive Neuroscience www
  • science-neuroscience-modeling

    Jess:(1.4) Whez:(1.0) Debian Science packages for modeling of neural systems www
  • science-numericalcomputation

    Jess:(1.4) Whez:(1.0) Debian Science Numerical Computation packages www
  • science-physics

    Jess:(1.4) Whez:(1.0) Debian Science Physics packages www
  • science-physics-dev

    Jess:(1.4) Whez:(1.0) Debian Science Physics-dev packages www
  • science-presentation

    Jess:(1.4) Debian Science generic tools for presentations www
  • science-psychophysics

    Jess:(1.4) Whez:(1.0) Debian Science packages for Psychophysics www
  • science-robotics

    Jess:(1.4) Whez:(1.0) Debian Robotics packages www
  • science-robotics-dev

    Jess:(1.4) Debian Robotics development packages www
  • science-simulations

    Jess:(1.4) Whez:(1.0) Debian Science Simulation packages www
  • science-social

    Jess:(1.4) Debian Science social sciences packages www
  • science-statistics

    Jess:(1.4) Whez:(1.0) Debian Science Statistics packages www
  • science-tasks

    Jess:(1.4) Whez:(1.0) Debian Science tasks for tasksel www
  • science-typesetting

    Jess:(1.4) Whez:(1.0) Debian Science typesetting packages www
  • science-viewing

    Jess:(1.4) Whez:(1.0) Debian Science data visualisation packages www
  • science-viewing-dev

    Jess:(1.4) Debian Science development of visualisation applications www
  • seaview

    Jess:(1:4.5.3.1-2) Multiplatform interface for sequence alignment and phylogeny www
  • seesat5

    Jess & Whez:(0.90.10-1.1) a satellite location program
  • seqan-apps

    Jess:(1.4.1+dfsg-2) Whez:(1.3.1-1) C++ library for the analysis of biological sequences www
  • seqtk

    Jess:(1.0-1) Fast and lightweight tool for processing sequences in the FASTA or FASTQ format www
  • sextractor

    Jess:(2.19.5+dfsg-1) Whez:(2.8.6+dfsg-1) Source extractor for astronomical images www
  • shelxle

    Jess:(1.0.677-1) Whez:(1.0.564-1) graphical user interface for SHELXL www
  • shogun-cmdline-static

    Jess:(3.2.0-7.3) Large Scale Machine Learning Toolbox www
  • sibsim4

    Jess:(0.20-2) Whez:(0.20-1) align expressed RNA sequences on a DNA template www
  • sigma-align

    Jess & Whez:(1.1.3-3) Simple greedy multiple alignment of non-coding DNA sequences www
  • sigviewer

    Jess:(0.5.1+svn556-4) Whez:(0.5.1+svn556-1+b1) GUI viewer for biosignals such as EEG, EMG, and ECG www
  • sim4

    Jess:(0.0.20121010-1) Whez:(0.0.20030921-3) tool for aligning cDNA and genomic DNA www
  • simgrid-java

    Jess:(3.11.1-9) Java bindings for the SimGrid Toolkit www
  • skycat

    Jess:(3.1.2+starlink1~b-8) Image visualization and access to catalogs and data for astronomy www
  • slang-xfig

    Jess & Whez:(0.2.0~.35-1.1) produce plots and drawings through Xfig's fig2dev in S-Lang www
  • smalt

    Jess:(0.7.6-4) Sequence Mapping and Alignment Tool www
  • smalt-examples

    Jess:(0.7.6-4) Sequence Mapping and Alignment Tool (examples) www
  • snap

    Jess:(2013-11-29-1) location of genes from DNA sequence with hidden markov model www
  • snp-sites

    Jess:(1.5.0-1) Binary code for the package snp-sites www
  • spass

    Jess & Whez:(3.7-3) An automated theorem prover for first-order logic with equality
  • spatialite-bin

    Jess:(4.1.1-4) Geospatial extension for SQLite - tools www
  • spd

    Jess & Whez:(1.3.0-1) Synchrotron image corrections and azimuthal integration www
  • splash

    Jess:(2.5.0-1) Visualisation tool for Smoothed Particle Hydrodynamics simulation www
  • squizz

    Jess:(0.99b+dfsg-3) Whez:(0.99a-2) Converter for genetic sequences and alignments www
  • ssake

    Jess:(3.8.2-1) Whez:(3.8-2) genomics application for assembling millions of very short DNA sequences www
  • ssake-examples

    Jess:(3.8.2-1) Whez:(3.8-2) example data for SSAKE, a genomic assembler of short reads www
  • staden

    Jess:(2.0.0+b10-1.1) DNA sequence assembly (Gap4/Gap5), editing and analysis tools www
  • staden-common

    Jess:(2.0.0+b10-1.1) Architecture independent files for Staden www
  • staden-io-lib-examples

    Jess:(1.13.7-1) programs for maniuplating DNA sequencing files www
  • staden-io-lib-utils

    Jess:(1.13.7-1) Whez:(1.12.4-1) programs for maniuplating DNA sequencing files www
  • stardata-common

    Jess & Whez:(0.8) Common framework to manage astronomy packages www
  • starplot

    Jess:(0.95.5-8.1) Whez:(0.95.5-4) 3-dimensional perspective star map viewer www
  • starpu-examples

    Jess:(1.1.3+dfsg-3+b1) Whez:(1.0.1+dfsg-1) Task scheduler for heterogeneous multicore machines - exs www
  • stellarium

    Jess:(0.13.1-1) Whez:(0.11.3-1+deb7u1) real-time photo-realistic sky generator www
  • stellarium-data

    Jess:(0.13.1-1) Whez:(0.11.3-1+deb7u1) Stellarium data files www
  • step

    Jess:(4:4.14.2-1) Whez:(4:4.8.4-1) interactive physical simulator for KDE www
  • stimfit

    Jess:(0.13.19-1) Whez:(0.10.18-1.1) Program for viewing and analyzing electrophysiological data www
  • sumo

    Jess:(0.21.0+dfsg-1) Whez:(0.15.0~dfsg-2) Simulation of Urban MObility (SUMO) www
  • survex

    Jess:(1.2.16-1) Whez:(1.2.6-4) cave surveying and mapping software www
  • survex-aven

    Jess:(1.2.16-1) Whez:(1.2.6-4) sophisticated cave survey viewer for Survex www
  • survex-svxedit

    Jess:(1.2.16-1) Whez:(1.2.6-4) survey data editor for Survex www
  • swarp

    Jess:(2.19.1-1) resample and co-add together FITS images www
  • swe-basic-data

    Jess:(1.80.00.0002-1) Whez:(1.77.00.0005-2) basic data files for the libswe package www
  • swe-standard-data

    Jess & Whez:(00004-1) standard data for the Swiss Ephemeris www
  • syrthes

    Jess:(4.1.1-dfsg1-5) Whez:(3.4.3-dfsg1-6) Transient thermal simulations in complex solid geometries www
  • syrthes-gui

    Jess:(4.1.1-dfsg1-5) Transient thermal simulations in complex solid geometries - GUI www
  • syrthes-tests

    Jess:(4.1.1-dfsg1-5) Test cases for SYRTHES www
  • syrthes-tools

    Jess:(4.1.1-dfsg1-5) Transient thermal simulations in complex solid geometries - tools www
  • Back to top
  • T

  • Rate It
  • t-coffee

    Jess:(11.00.8cbe486-1) Whez:(9.02.r1228-2) Multiple Sequence Alignment www
  • t-coffee-examples

    Jess:(11.00.8cbe486-1) Whez:(9.02.r1228-2) annotated examples for the use of T-Coffee www
  • tabix

    Jess:(0.2.6-2) Whez:(0.2.6-1) generic indexer for TAB-delimited genome position files www
  • tandem-mass

    Jess:(1:2013.09.01-2) mass spectrometry software for protein identification www
  • tcd-utils

    Jess & Whez:(20061127-2) convert Tide Constituent Database (TCD) files
  • terraintool

    Jess & Whez:(1.12a-1) Generates survex format terrain models from SRTM and ASTER data www
  • tessa

    Jess:(0.3.1-6.1) Whez:(0.3.1-6) simulation of 3D optical systems with the FDTD method
  • tessa-mpi

    Jess:(0.3.1-6.1) Whez:(0.3.1-6) simulation of 3D optical systems using FDTD on MPI clusters
  • thepeg

    Jess & Whez:(1.8.0-1) Toolkit for High Energy Physics Event Generation www
  • thepeg-gui

    Jess & Whez:(1.8.0-1) Java GUI of ThePEG www
  • thepeg-reference

    Jess & Whez:(1.8.0-1) Code reference of ThePEG www
  • therion

    Jess:(5.3.15-2) Whez:(5.3.9-4) Cave surveying - 2D and 3D drawing software
  • therion-viewer

    Jess:(5.3.15-2) Whez:(5.3.9-4) Cave surveying - 3D viewer for therion models
  • theseus

    Jess:(3.0.0-1) Whez:(1.6.2-2) superimpose macromolecules using maximum likelihood www
  • tigr-glimmer

    Jess:(3.02-3) Whez:(3.02-2) Gene detection in archea and bacteria www
  • timbl

    Jess:(6.4.4-4) Whez:(6.4.2-1) Tilburg Memory Based Learner www
  • timblserver

    Jess:(1.7-4) Whez:(1.4-2) Server extensions for Timbl www
  • tm-align

    Jess:(20140601+dfsg-1) Whez:(20120507-1) structual alignment of proteins www
  • tophat

    Jess:(2.0.10-1) fast splice junction mapper for RNA-Seq reads www
  • topp

    Jess:(1.11.1-5) set of programs implementing The OpenMS Proteomic Pipeline www
  • transcalc

    Jess & Whez:(0.14-5) microwave and RF transmission line calculator www
  • transtermhp

    Jess:(2.09-2) Whez:(2.09-1) find rho-independent transcription terminators in bacterial genomes www
  • travis

    Jess:(140902-1) trajectory analyzer and visualizer www
  • tree-ppuzzle

    Jess:(5.2-7+b1) Whez:(5.2-7) Parallelized reconstruction of phylogenetic trees by maximum likelihood www
  • tree-puzzle

    Jess:(5.2-7+b1) Whez:(5.2-7) Reconstruction of phylogenetic trees by maximum likelihood www
  • treeviewx

    Jess:(0.5.1+20100823-3) Whez:(0.5.1+20100823-1) Displays and prints phylogenetic trees www
  • trimmomatic

    Jess:(0.32+dfsg-4) flexible read trimming tool for Illumina NGS data www
  • tunnelx

    Jess:(20140102-2) Whez:(20110801-2.1) Cave Survey drawing software www
  • twms

    Jess:(0.05t-2) Whez:(0.03e-2) tiny web map service www
  • Back to top
  • U

  • Rate It
  • uc-echo

    Jess:(1.12-7) error correction algorithm designed for short-reads from NGS www
  • ucto

    Jess:(0.5.3-3.1+b1) Whez:(0.5.2-2) Unicode Tokenizer www
  • uhd-host

    Jess:(3.7.3-1) Whez:(3.4.2-1) universal hardware driver for Ettus Research products www
  • units-filter

    Jess:(3.7-1) Whez:(3.5-2) Parser for expressions concerning physical values
  • urg-utils

    Jess:(0.8.18-2) Whez:(0.8.12-4) utilities for Hokuyo URG/UTM laser range scanners
  • Back to top
  • V

  • Rate It
  • v-sim

    Jess:(3.7.1-1) Whez:(3.6.0-2) Visualize atomic structures www
  • v-sim-common

    Jess:(3.7.1-1) Whez:(3.6.0-2) Visualize atomic structures (support files) www
  • v-sim-plugins

    Jess:(3.7.1-1) Whez:(3.6.0-2) Plugins for V_Sim (a 3D visualization package) www
  • vcftools

    Jess:(0.1.12+dfsg-1) Whez:(0.1.9-1) Collection of tools to work with VCF files www
  • velvet

    Jess:(1.2.10+dfsg1-1) Whez:(1.2.03~nozlibcopy-1) Nucleic acid sequence assembler for very short reads www
  • velvet-example

    Jess:(1.2.10+dfsg1-1) Whez:(1.2.03~nozlibcopy-1) Example data for the Velvet sequence assembler www
  • velvet-long

    Jess:(1.2.10+dfsg1-1) Nucleic acid sequence assembler for very short reads, long version www
  • velvet-tests

    Jess:(1.2.10+dfsg1-1) Test data for the Velvet sequence assembler www
  • velvetoptimiser

    Jess:(2.2.5-2) automatically optimise Velvet do novo assembly parameters www
  • veusz

    Jess:(1.21.1-1) Whez:(1.15-1) 2D scientific plotting application with graphical interface www
  • veusz-helpers

    Jess:(1.21.1-1) Whez:(1.15-1) Architecture-specific helper module for Veusz www
  • via-bin

    Jess & Whez:(2.0.4-2) tools for volumetric image analysis www
  • viewmol

    Jess:(2.4.1-22) Whez:(2.4.1-18) A graphical front end for computational chemistry programs. www
  • visp-images-data

    Jess:(2.9.0-2) visual servoing library - reference files www
  • vistrails

    Jess:(2.1.1-1) Whez:(2.0.alpha~1-3) Science visualisation workflow toolkit www
  • volview

    Jess:(3.4+dfsg-1+b1) Whez:(3.4-3) Advanced volume visualization tool www
  • votca-csg

    Jess:(1.2.4-1) VOTCA's coarse-graining engine www
  • votca-csg-scripts

    Jess:(1.2.4-1) VOTCA's coarse-graining scripts www
  • votca-csg-tutorials

    Jess:(1.2.4-1) VOTCA's coarse-graining tutorials www
  • vowpal-wabbit

    Jess:(7.3-1.1) Whez:(6.1-1) fast and scalable online machine learning algorithm www
  • voxbo

    Jess:(1.8.5~svn1246-1.1) Whez:(1.8.5~svn1246-1) processing, statistical analysis, and display of brain imaging data www
  • Back to top
  • W

  • Rate It
  • wcslib-tools

    Jess:(4.24-1) Whez:(4.13.4-1) Command line tools utilizing wcslib www
  • wcstools

    Jess:(3.9.0+dfsg-1) Whez:(3.8.5-1) Handle the WCS of a FITS image www
  • weka

    Jess:(3.6.11-1) Whez:(3.6.6-1) Machine learning algorithms for data mining tasks www
  • wfrog

    Jess:(0.8.2+svn953-1) Web-based customizable weather station software www
  • wigeon

    Jess:(20101212+dfsg-1) reimplementation of the Pintail 16S DNA anomaly detection utility www
  • wise

    Jess:(2.4.1-17) Whez:(2.4.1-10) comparison of biopolymers, like DNA and protein sequences www
  • wxastrocapture

    Jess:(1.8.1+git20140821+dfsg-1) Windows linuX Astronomy Capture www
  • Back to top
  • X

  • Rate It
  • xbs

    Jess & Whez:(0-8) 3-d models and movies of molecules
  • xcrysden

    Jess:(1.5.60-1) Whez:(1.5.53-1) Crystalline and Molecular Structure Visualizer www
  • xcrysden-data

    Jess:(1.5.60-1) Whez:(1.5.53-1) Crystalline and Molecular Structure Visualizer (Data Files) www
  • xdrawchem

    Jess:(2.0-3) Whez:(2.0-2) Chemical structures and reactions editor
  • xflr5

    Jess:(6.09.06-2) Whez:(6.07+svn513-1) analysis tool for airfoils www
  • xfoil

    Jess:(6.99.dfsg-2) Whez:(6.97.dfsg-5) program for the design and analysis of subsonic airfoils www
  • xmakemol

    Jess:(5.16-7) Whez:(5.16-6) program for visualizing atomic and molecular systems www
  • xmakemol-gl

    Jess:(5.16-7) Whez:(5.16-6) program for visualizing atomic and molecular systems (OpenGL) www
  • xmds

    Jess & Whez:(1.6.6-7) eXtensible Multi-Dimensional Simulator www
  • xmds2

    Jess:(2.2.2+dfsg-1) eXtensible Multi-Dimensional Simulator www
  • xpa-tools

    Jess:(2.1.15-4) Whez:(2.1.14-2) Tools for seamless communication between Unix programs www
  • xplot

    Jess & Whez:(1.19-9) simple on-screen x-y column data plotter
  • xplot-xplot.org

    Jess & Whez:(0.90.7.1-2) fast tool to graph and visualize lots of data www
  • xppaut

    Jess & Whez:(6.11b+1.dfsg-1) Phase Plane Plus Auto: Solves many kinds of equations www
  • xtide

    Jess:(2.13.2-1) Whez:(2.11-1) provides tide and current predictions www
  • xtide-coastline

    Jess & Whez:(20020202-1) coastline data for xtide
  • xtide-data

    Jess & Whez:(20100529-1) Harmonics data for xtide www
  • xyscan

    Jess:(3.33-1) Whez:(3.31-3) data thief for scientists www
  • Back to top
  • Y

  • Rate It
  • yade

    Jess:(1.12.0-2) Platform for discrete element modeling www
  • yagv

    Jess:(0.4~20130422.r5bd15ed+dfsg-1) yet another G-code viewer www
  • ygraph

    Jess:(0.16~cvs20090218-1.2) Whez:(0.16~cvs20090218-1.1) plot and animate data sets
  • yorick

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) interpreted language and scientific graphics www
  • yorick-av

    Jess:(0.0.3-3+b1) Whez:(0.0.1-2) write movies from Yorick in various formats www
  • yorick-cubeview

    Jess:(2.2-2) Whez:(1.6-2) 3D FITS data viewer specialized in spectro-imaging www
  • yorick-curses

    Jess & Whez:(0.1-6) interface to the (n)curses library for the Yorick language
  • yorick-data

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) interpreted library for the Yorick language www
  • yorick-dev

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) development files for the Yorick interpreted language www
  • yorick-full

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) full installation of the Yorick interpreter and add-ons www
  • yorick-gl

    Jess:(1.1+cvs20070922+dfsg-6.1) Whez:(1.1+cvs20070922+dfsg-6) OpenGL 3D graphics support for the Yorick language www
  • yorick-gy

    Jess:(0.0.5-1) GObject introspection and Gtk bindings for Yorick www
  • yorick-gyoto

    Jess:(0.2.3-1) Whez:(0.0.3-5) General relativistic geodesic integration for the Yorick language www
  • yorick-hdf5

    Jess:(0.8.0-5+b1) Whez:(0.8.0-4) Hierarchical Data Format 5 interface for the Yorick language
  • yorick-imutil

    Jess & Whez:(0.5.7-3) fast image manipulation routines for the Yorick language
  • yorick-mira

    Jess & Whez:(0.9.10+dfsg-1) optical interferometry image reconstruction within Yorick www
  • yorick-ml4

    Jess & Whez:(0.6.0-3) Matlab file format support for the Yorick language
  • yorick-mpeg

    Jess:(0.1-3) Whez:(0.1-2) MPEG output support for the Yorick language www
  • yorick-mpy-common

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) Message Passing Yorick (common files) www
  • yorick-mpy-mpich2

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) Message Passing Yorick (MPICH2 build) www
  • yorick-mpy-openmpi

    Jess:(2.2.03+dfsg-3) Whez:(2.2.02+dfsg-6) Message Passing Yorick (OpenMPI build) www
  • yorick-optimpack

    Jess & Whez:(1.3.2+dfsg-1) optimization of large scale problems for the Yorick language www
  • yorick-soy

    Jess & Whez:(1.4.0-3) sparse matrix operations for the Yorick language www
  • yorick-spydr

    Jess & Whez:(0.8.2-3) FITS image display and simple analysis www
  • yorick-svipc

    Jess:(0.16-2) Whez:(0.14-2) interprocess communication (shared memory...) for Yorick www
  • yorick-yao

    Jess:(5.4.0-1) Whez:(4.9.1-2) Yorick-based adaptive optics system simulator www
  • yorick-yeti

    Jess:(6.3.3-2) Whez:(6.3.2-3) utility plugin for the Yorick language www
  • yorick-yeti-fftw

    Jess:(6.3.3-2) Whez:(6.3.2-3) FFT plugin for the Yorick language www
  • yorick-yeti-gsl

    Jess:(6.3.3-2) Whez:(6.3.2-3) dummy transitional package www
  • yorick-yeti-regex

    Jess:(6.3.3-2) Whez:(6.3.2-3) POSIX regular expressions for the Yorick language www
  • yorick-yeti-tiff

    Jess:(6.3.3-2) Whez:(6.3.2-3) TIFF image format input for the Yorick language www
  • yorick-ygsl

    Jess:(1.2.0-1) GSL special functions plugin for the Yorick language www
  • yorick-ynfft

    Jess:(1.0.2-2) nonequispaced fast Fourier transform for Yorick www
  • yorick-yutils

    Jess & Whez:(1.5.2-1) various utilities for the Yorick language
  • yorick-z

    Jess & Whez:(1.2.0+cvs20080115-5) zlib, jpeg and png support for the Yorick language www
  • Back to top
  • Z

  • Rate It
  • z88

    Jess & Whez:(13.0.0+dfsg2-3) Finite Element Analysis Program - runtime www
  • z88-data

    Jess & Whez:(13.0.0+dfsg2-3) Finite Element Analysis Program - data www
  • zalign

    Jess:(0.9.1-1+b1) parallel local alignment of biological sequences www
  • zegrapher

    Jess:(2.0-4) plotting mathematical functions and sequences on the plane www
  • zimpl

    Jess:(3.3.2-1) Whez:(3.2.0+dfsg-2) mathematical modeling language for optimization problems www
  • ztex-bmp

    Jess:(20120314-2) universal macro processor www
Last modified on Saturday, 02 July 2016 09:54
Google

Leave a comment

Comments for Guest and account owners. Account owners will need to login to use registered e-mail address.

Additional information