Science Packages

Science related packages

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SCIENCE

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  • 3depict

    0.0.10-1 visualisation and analysis for single valued point data
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  • A

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  • abacas

    1.3.1-1 Algorithm Based Automatic Contiguation of Assembled Sequences
  • abinit

    5.3.4.dfsg-3 A package for electronic structure calculations
  • acedb-other-belvu

    4.9.39+dfsg.01-5 multiple sequence alignment editor
  • acedb-other-dotter

    4.9.39+dfsg.01-5 visualisation of sequence similarity
  • acedb-other

    4.9.39+dfsg.01-5 retrieval of DNA or protein sequences
  • aces3

    3.0.6-7 Advanced Concepts in Electronic Structure III
  • achilles

    2-8 An artificial life and evolution simulator
  • aeskulap

    0.2.2b1-11 medical image viewer and DICOM network client
  • aghermann

    0.6.0.1-1 Sleep-research experiment manager
  • algotutor

    0.8.6-1 program for observing the intermediate steps of algorithm
  • alien-hunter

    1.7-1 Interpolated Variable Order Motifs to identify horizontally acquired DNA
  • altree-examples

    1.2.1-1 example files for ALTree
  • altree

    1.2.1-1 program to perform phylogeny-based association and localization analysis
  • amap-align

    2.2-3 Protein multiple alignment by sequence annealing
  • ampliconnoise

    1.25-1 Programs for the removal of noise from 454 sequenced PCR amplicons
  • ants

    1.9.2+svn680.dfsg-4 advanced normalization tools for brain and image analysis
  • apbs

    1.3.0-2 Adaptive Poisson Boltzmann Solver
  • astronomical-almanac

    5.6-4 astronomical almanac - calculate planet and star positions
  • autodock-getdata

    4.2.3-2 instructions for getData to collect compounds
  • autodock-test

    4.2.3-2 test files for AutoDock
  • autodock-vina

    1.1.2-2 docking of small molecules to proteins
  • autodock

    4.2.3-2 analysis of ligand binding to protein structure
  • autogrid-test

    4.2.3-2 test files for AutoGrid
  • autogrid

    4.2.3-2 pre-calculate binding of ligands to their receptor
  • avce00

    2.0.0-2 Tools for conversion of ESRI Arcinfo (binary) Vector Coverage in E00 format.
  • avogadro-data

    1.0.3-5 Molecular Graphics and Modelling System (Data Files)
  • avogadro

    1.0.3-5 Molecular Graphics and Modelling System
  • aweather

    0.7-1 Advanced Weather Monitoring Program
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  • B

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  • ballview

    1.4.1+20111206-4 free molecular modeling and molecular graphics tool
  • bauble

    0.9.7-2 biodiversity collection manager software application
  • bedtools

    2.16.1-1 suite of utilities for comparing genomic features
  • bibus

    1.5.2-1 bibliographic database
  • biogenesis

    0.8-1 artificial life program that simulates evolution of organisms
  • biomaj-properties

    1.2.1-1 biological data-bank updater - example properties files
  • biomaj

    1.2.1-1 biological data-bank updater
  • bioperl-run

    1.6.9-1 BioPerl wrappers: scripts
  • bioperl

    1.6.901-3 Perl tools for computational molecular biology
  • biosig-tools

    1.3.0-2 format conversion tools for biomedical data formats
  • biosquid

    1.9g+cvs20050121-2 utilities for biological sequence analysis
  • bist

    0.5.2-1 chemical drawing tool
  • bkchem

    0.13.0-4 Chemical structures editor
  • blast2

    1:2.2.26.20120620-2 Basic Local Alignment Search Tool
  • bodr

    9-1 Blue Obelisk Data Repository
  • boinc-app-milkyway

    0.18d-1.1 Milkyway@home application for the BOINC client
  • boinc-app-seti

    6.97~svn1409-1 SETI@home application for the BOINC client
  • boolector

    1.4.ffc2089.100608-1 SMT solver for bit-vectors and arrays
  • bowtie-examples

    0.12.7-3 Examples for bowtie, the ultrafast memory-efficient short read aligner
  • bowtie2-examples

    2.0.0-beta6-3 Examples for bowtie2,
  • bowtie

    0.12.7-3 ultrafast memory-efficient short read aligner
  • boxshade

    3.3.1-7+wheezy1 Pretty-printing of multiple sequence alignments
  • bppphyview

    0.2.1-1 Bio++ Phylogenetic Viewer
  • bppsuite

    0.7.0-1 Bio++ program suite
  • bwa

    0.6.2-1 Burrows-Wheeler Aligner
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  • C

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  • cain-examples

    1.9-4 simulations of chemical reactions
  • cain-solvers

    1.9-4 simulations of chemical reactions
  • cain

    1.9-4 simulations of chemical reactions
  • caret

    5.6.4~dfsg.1-3 Computerized Anatomical Reconstruction and Editing Toolkit
  • cba

    0.3.6-4 Continuous Beam Analysis
  • cbflib-bin

    0.7.9.1-3 utilities to manipulate CBF files
  • cbmc

    4.1-1.2 bounded model checker for C and C++ programs
  • cclib

    1.0.1-2 Parsers and algorithms for computational chemistry
  • cd-hit

    4.6-2012-04-25-1 suite of programs designed to quickly group sequences
  • celestia-common

    1.6.1+dfsg-2 datafiles for Celestia, a real-time visual space simulation
  • celestia-glut

    1.6.1+dfsg-2 real-time visual space simulation (GLUT frontend)
  • celestia

    1.6.1+dfsg-2 real-time visual space simulation
  • cernlib-core

    20061220+dfsg3-2 CERNLIB data analysis suite - main libraries and programs
  • cernlib-extras

    20061220+dfsg3-2 CERNLIB data analysis suite - extra programs
  • cernlib-montecarlo

    20061220+dfsg3-2 CERNLIB Monte Carlo libraries
  • cernlib

    20061220+dfsg3-2 CERNLIB data analysis suite - general use metapackage
  • cgns-convert

    3.1.3.4-1 CFD General Notation System - Conversion tools
  • chemical-structures

    2.2.dfsg.0-8 set of molecular structures in open formats
  • chemtool

    1.6.13-1 chemical structures drawing program
  • circos-tools

    0.16-2 Helper tools for Circos
  • circos

    0.61-3 plotter for visualizing data
  • clinica-common

    0.2.1~dfsg-1 Simple medical records manager (architecture independent files)
  • clinica-dev

    0.2.1~dfsg-1 Simple medical records manager (development files)
  • clinica-plugins

    0.2.1~dfsg-1 Simple medical records manager (plugins)
  • clinica

    0.2.1~dfsg-1 Simple medical records manager
  • clonalframe

    1.2-3 inference of bacterial microevolution using multilocus sequence data
  • clustalo

    1.1.0-1 General purpose multiple sequence alignment program for proteins
  • clustalw

    2.1+lgpl-2 global multiple nucleotide or peptide sequence alignment
  • clustalx

    2.1+lgpl-2 Multiple alignment of nucleic acid and protein sequences (graphical interface)
  • cmtk

    2.2.2-2 Computational Morphometry Toolkit
  • code-aster-engine

    10.6.0-1-4 Code_Aster finite element program - sequential binary
  • code-aster-gui

    1.8.4-5 Graphical user interface for Code_Aster - client
  • code-aster-mpi-engine

    10.6.0-1-4 Code_Aster finite element program - parallel binary
  • code-aster-run

    1.8.4-5 Graphical user interface for Code_Aster - server
  • code-aster-test

    10.6.0-1-4 Code_Aster finite element program - test files and examples
  • code-aster

    10.6.0-1-4 Code_Aster finite element program - metapackage
  • code-saturne-bin

    2.1.7-1 General purpose Computational Fluid Dynamics (CFD) software - binaries
  • code-saturne-data

    2.1.7-1 General purpose Computational Fluid Dynamics (CFD) software - data
  • code-saturne-doc

    2.1.7-1 General purpose Computational Fluid Dynamics (CFD) software - Documentation
  • code-saturne-include

    2.1.7-1 General purpose Computational Fluid Dynamics (CFD) software - includes
  • code-saturne

    2.1.7-1 General purpose Computational Fluid Dynamics (CFD) software
  • coinor-csdp

    6.1.1-1 A software package for semidefinite programming
  • coinor-libcgl0

    0.55.0-1.1 Cut Generator Library, a library of cutting-plane generators
  • coinor-libclp0

    1.12.0-2.1 Coin-or linear programming solver
  • coinor-libcoinutils0

    2.6.4-3 Coin-or collection of utility classes
  • coinor-libdylp0

    1.6.0-1.1 Linear programming solver using the dynamic simplex algorithm
  • coinor-libflopc++0

    1.0.6-3.1 Formulation of Linear Optimization Problems in C++
  • coinor-libosi0

    0.103.0-1 COIN-OR Open Solver Interface
  • coinor-libsymphony0

    5.2.4-1.2 COIN-OR solver for mixed-integer linear programs
  • coinor-libvol0

    1.1.7-1 Coin-or linear programming solver
  • complearn-tools

    1.1.7-2 complearn machine-learning command-line utilities
  • condor

    7.8.2~dfsg.1-1+deb7u1 distributed workload management system
  • cp2k-data

    2.2.426-8 Ab Initio Molecular Dynamics (data files)
  • cp2k

    2.2.426-8 Ab Initio Molecular Dynamics
  • critterding

    1.0-beta12.1-1.2 Evolving Artificial Life
  • ctsim-help

    5.2.0-1.1 Online help file for CTSim
  • ctsim

    5.2.0-1.1 Computed tomography simulator
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  • D

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  • dans-gdal-scripts

    0.18-1.1 GDAL contributed tools by Geographic Information Network of Alaska
  • dcmtk

    3.6.0-12 OFFIS DICOM toolkit command line utilities
  • dialign-tx-data

    1.0.2-2 Common data files for dialign-tx
  • dialign-tx

    1.0.2-2 Segment-based multiple sequence alignment
  • dialign

    2.2.1-5 Segment-based multiple sequence alignment
  • dicomnifti

    2.30.0-1 converts DICOM files into the NIfTI format
  • dicompyler

    0.4.1-1-1 radiation therapy research platform
  • diet-agent

    2.8.0-1 DIET grid middleware - agent
  • dimbl

    0.11-1 Distributed Memory Based Learner
  • disulfinder-data

    1.2.11-2 data files for predictor of disulfide bonds in proteins
  • disulfinder

    1.2.11-2 cysteines disulfide bonding state and connectivity predictor
  • dotur

    1.53-2 distance based OTU and richness estimation
  • dozzaqueux-data

    3.21-4 databases for chemical mixtures
  • dozzaqueux

    3.21-4 simulator for chemical mixtures
  • drawxtl

    5.5-3 crystal structure viewer
  • drslib

    0.3.0a3-3 Command-line tools for the Data Reference Syntax library
  • dsdp

    5.8-9.1 Software for Semidefinite Programming
  • dssp

    2.0.4-2 protein secondary structure assignment based on 3D structure
  • dx

    1:4.4.4-4 OpenDX (IBM Visualization Data Explorer) - main package
  • dxsamples

    4.2.0-1 Sample programs for the OpenDX Data Explorer
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  • E

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  • e00compr

    1.0.1-2 A program to read/write Arcinfo compressed E00 files
  • easychem

    0.6-7 Draw high-quality molecules and 2D chemical formulas
  • ecaccess

    4.0.0-3 clients to access ECMWF facilities
  • edfbrowser

    1.48-1 viewer for biosignal storage files such as bdf and edf
  • eficas

    6.4.0-1-1.1 Graphical editor for Code Aster command files
  • elastix

    4.5-2 toolbox for rigid and nonrigid registration of images
  • elki

    0.5.0-1 Data mining algorithm development framework
  • elmer-common

    6.1.0.svn.5396.dfsg2-2 finite element multiphysics suite - architecture-independent files
  • elmer

    6.1.0.svn.5396.dfsg2-2 finite element multiphysics suite - binaries
  • embassy-domainatrix

    0.1.0+20110714-1 Extra EMBOSS commands to handle domain classification file
  • embassy-domalign

    0.1.0+20110714-1 Extra EMBOSS commands for protein domain alignment
  • embassy-domsearch

    1:0.1.0+20110714-1 Extra EMBOSS commands to search for protein domains
  • emboss-data

    6.4.0-2 data files for the EMBOSS package
  • emboss-explorer

    2.2.0-7+deb7u1 web-based GUI to EMBOSS
  • emboss-lib

    6.4.0-2 EMBOSS Libraries
  • emboss

    6.4.0-2 european molecular biology open software suite
  • engauge-digitizer

    5.0-3 interactively extracts numbers from bitmap graphs or maps
  • ent

    1.1debian-2 pseudorandom number sequence test program
  • epigrass

    2.0.4-3 scientific tool for simulations and scenario analysis in network epidemiology
  • epsilon-bin

    0.9.1-2 A library for wavelet image compression - tools
  • esorex

    3.9.6-1 Execution Tool for European Southern Observatory pipelines
  • esys-particle

    2.1-4 Software for particle-based numerical modelling. MPI version.
  • etsf-io

    1.0.3-4 Binary tools to check, merge and read ETSF files
  • exonerate

    2.2.0-6 generic tool for pairwise sequence comparison
  • expeyes

    2.0.0-3 hardware & software framework for developing science experiments
  • extrema

    4.4.5.dfsg-3 powerful visualization and data analysis tool
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  • fastdnaml

    1.2.2-10 Tool for construction of phylogenetic trees of DNA sequences
  • fastlink

    4.1P-fix95-3 faster version of pedigree programs of Linkage
  • fasttree

    2.1.4-1 phylogenetic trees from alignments of nucleotide or protein sequences
  • fastx-toolkit

    0.0.13.2-1 FASTQ/A short nucleotide reads pre-processing tools
  • fcc

    2.7-1 Script to compile C/C++ programs and link to Fortran libraries
  • ffindex

    0.9.6.1-1 simple index/database for huge amounts of small files
  • figtree

    1.3.1-1 graphical phylogenetic tree viewer
  • filo

    1.1+2011020401.2 FILe and stream Operations
  • fityk

    0.9.8-3 general-purpose nonlinear curve fitting and data analysis
  • freeaccount

    0.7.6-1 medical accountancy manager
  • freecad

    0.12.5284-dfsg-7 Extensible Open Source CAx program (alpha)
  • freediams

    0.7.6-1 pharmaceutical drug prescription and interaction manager
  • freemedforms-common-resources

    0.7.6-1 common data for the FreeMedForms project applications
  • freemedforms-emr-resources

    0.7.6-1 data for the FreeMedForms EMR
  • freemedforms-emr

    0.7.6-1 electronic medical record manager
  • freemedforms-freedata

    0.7.6-1 free extra-data for the FreeMedForms project
  • freemedforms-i18n

    0.7.6-1 translations of the FreeMedForms project
  • freemedforms-libs

    0.7.6-1 common libs for the FreeMedForms project
  • freemedforms-project

    0.7.6-1 FreeMedForms project
  • freemedforms-theme

    0.7.6-1 theme for the FreeMedForms project
  • frog

    0.12.15-3 tagger and parser for Dutch language
  • frogdata

    0.3-2 Data files for Frog
  • funtools

    1.4.4-3 Minimal buy-in FITS utility package
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  • G

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  • g3data

    1:1.5.3-2 extract data from scanned graphs
  • gabedit

    2.4.2-2 graphical user interface to Ab Initio packages
  • gamgi-data

    0.15.8-1 General Atomistic Modelling Graphic Interface (data)
  • gamgi

    0.15.8-1 General Atomistic Modelling Graphic Interface (GAMGI)
  • garlic

    1.6-1.1 A visualization program for biomolecules
  • gausssum

    2.2.5-2 parse and display Gaussian, GAMESS, and etc's output
  • gbrowse-calign

    2.48~dfsg-1 CAlign helper
  • gbrowse-data

    2.48~dfsg-1 Sample data to use GBrowse
  • gbrowse

    2.48~dfsg-1 GMOD Generic Genome Browser
  • gchempaint

    0.12.12-1 2D chemical structures editor for the GNOME2 desktop
  • gcrystal

    0.12.12-1 lightweight crystal structures visualizer
  • gcu-bin

    0.12.12-1 GNOME chemistry utils (helper applications)
  • gcu-plugin

    0.12.12-1 GNOME chemistry utils (browser plugin)
  • gcx

    1.3-1.1 astronomical image processing and photometry gtk+ application
  • gdal-bin

    1.9.0-3.1 Geospatial Data Abstraction Library - Utility programs
  • gdis-data

    0.90-4 molecular and crystal model viewer (data files)
  • gdis

    0.90-4 molecular and crystal model viewer
  • gdpc-examples

    2.2.5-2 example files for the gdpc program
  • gdpc

    2.2.5-2 visualiser of molecular dynamic simulations
  • geant321-data

    1:3.21.14.dfsg-10 [Physics] Data for GEANT 3.21 detector simulator
  • geant321

    1:3.21.14.dfsg-10 [Physics] Particle detector description and simulation tool
  • gelemental

    1.2.0-8 Periodic Table viewer
  • gentle

    1.9+cvs20100605+dfsg1-1 suite to plan genetic cloning
  • geographiclib-tools

    1.21-1 A C++ library to solve some geodesic problems -- tools
  • geotiff-bin

    1.3.0+dfsg-3+rpi1 the GeoTIFF library -- tools
  • gerris-mpi

    20110329-dfsg.2-1 Gerris Flow Solver
  • gerris

    20110329-dfsg.2-1 Gerris Flow Solver
  • getdata

    0.1-1 management of external databases
  • gff2aplot

    2.0-7 pair-wise alignment-plots for genomic sequences in PostScript
  • gff2ps

    0.98d-4 produces PostScript graphical output from GFF-files
  • ghkl

    4.0.3-4 diffractometer computation control application
  • ginkgocadx

    2.12.0.4889-1 Medical Imaging Software and complete DICOM Viewer
  • glam2

    1064-1 gapped protein motifs from unaligned sequences
  • gmt

    4.5.7-2 Generic Mapping Tools
  • gofigure2

    0.9.0-1 Tool for visualizing, processing and analysing of bioimages
  • gperiodic

    2.0.10-7 periodic table application
  • gpiv-mpi

    0.6.1-2 GUI program for Particle Image Velocimetry - MPI version
  • gpiv

    0.6.1-2 GUI program for Particle Image Velocimetry
  • gpivtools-mpi

    0.6.0-3 command line programs for Particle Image Velocimetry - MPI version
  • gpivtools

    0.6.0-3 command line programs for Particle Image Velocimetry
  • gpx2shp

    0.69-3.1 convert GPS or GPX file to ESRI Shape file
  • grads

    2.0.a9-4 Grid Analysis and Display System for earth science data
  • grass-core

    6.4.2-2 GRASS GIS core components
  • grass-gui

    6.4.2-2 GRASS GIS graphical user interfaces
  • grass

    6.4.2-2 Geographic Resources Analysis Support System (GRASS GIS)
  • gri

    2.12.23-2.2 a language for scientific illustration
  • grinder

    0.4.5-1 Versatile omics shotgun and amplicon sequencing read simulator
  • gromacs-data

    4.5.5-2 GROMACS molecular dynamics sim, data and documentation
  • gromacs-mpich

    4.5.5-2 Molecular dynamics sim, binaries for MPICH parallelization
  • gromacs-openmpi

    4.5.5-2 Molecular dynamics sim, binaries for OpenMPI parallelization
  • gromacs

    4.5.5-2 Molecular dynamics simulator, with building and analysis tools
  • gvb

    1.2.1-1 visual simulator of 1 and 2-dimensional vibrations
  • gwyddion-common

    2.28-2 architecture-independent files for Gwyddion SPM analysis tool
  • gwyddion-plugins

    2.28-2 plugins for Gwyddion SPM analysis tool
  • gwyddion

    2.28-2 Scanning Probe Microscopy visualization and analysis tool
  • gyoto

    0.0.3-5 General relativistic ray-tracing
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  • H

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  • h5utils

    1.12.1-2 HDF5 files visualization tools
  • harminv

    1.3.1-9 extraction of complex frequencies and amplitudes from time series
  • hdf5-helpers

    1.8.8-9 Hierarchical Data Format 5 (HDF5) - Helper tools
  • hdf5-tools

    1.8.8-9 Hierarchical Data Format 5 (HDF5) - Runtime tools
  • hhsuite-data

    2.0.15-1 sensitive protein sequence searching based on HMM-HMM alignment (data)
  • hmmer

    3.0-4 profile hidden Markov models for protein sequence analysis
  • hodie

    1.5-1 prints the date in latin
  • hpcc

    1.4.1-2 HPC Challenge benchmark
  • hyantesite

    1.3.0-1 geomatic tool to compute neighbourhood population potential
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  • I

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  • ifrit

    3.3.4-3 powerful tool for visualizing 3-dimensional data sets
  • imagej

    1.46a-1 Image processing program inspired by NIH Image for the Macintosh
  • imagevis3d

    2.0.1-5 desktop volume rendering application for large data
  • imview

    1.1.9c-9 Image viewing and analysis application
  • indigo-utils

    1.0.0-2 Organic Chemistry Toolkit Utilities
  • infernal

    1.0.2-2 inference of RNA secondary structural alignments
  • itksnap

    2.2.0-1.1 semi-automatic segmentation of structures in 3D images
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  • J

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  • jalview

    2.7.dfsg-2 multiple alignment editor
  • jblas

    1.2.0-4 fast linear algebra library for Java
  • jemboss

    6.4.0-2 graphical user interface to EMBOSS
  • jmol

    12.2.32+dfsg2-1 Molecular Viewer
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  • K

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  • kalign

    1:2.03+20110620-2 Global and progressive multiple sequence alignment
  • kalzium-data

    4:4.8.4-1 data files for Kalzium
  • kalzium

    4:4.8.4-1 periodic table and chemistry tools
  • klustakwik

    2.0.1-1 automatic sorting of the samples (spikes) into clusters
  • kst-data

    2.0.3-1.3 set of data files for kst
  • kst

    2.0.3-1.3 scientific data plotting tool
  • kstars-data

    4:4.8.4-1 data files for KStars desktop planetarium
  • kstars

    4:4.8.4-1 desktop planetarium for KDE
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  • L

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  • lammps

    0~20120615.gite442279-1 Molecular Dynamics Simulator.
  • last-align

    199-1 genome-scale comparison of biological sequences
  • lbt

    1.2.2-5 converts from LTL formulas to B├╝chi automata
  • lhapdf-pdfsets-minimal

    5.8.7+repack-1 Minimal PDF Sets of LHAPDF
  • libball1.4-data

    1.4.1+20111206-4 Biochemical Algorithms Library
  • libball1.4

    1.4.1+20111206-4 Biochemical Algorithms Library
  • libballview1.4

    1.4.1+20111206-4 Biochemical Algorithms Library, VIEW framework
  • libbiojava-java-demos

    1:1.7.1-2 Example programs for BioJava
  • libbiojava-java

    1:1.7.1-2 Java API to biological data and applications (default version)
  • libbiojava1.7-java

    1:1.7.1-2 Java API to biological data and applications (version 1.7)
  • libclassad3

    7.8.2~dfsg.1-1+deb7u1 Condor classads expression language - runtime library
  • libclhep2.1

    2.1.2.3-1 CLHEP: A Class Library for High Energy Physics
  • libclinica0

    0.2.1~dfsg-1 Simple medical records manager (shared library)
  • libghemical-data

    3.0.0-2 Molecular Modelling Library (data files)
  • libgofigure0

    0.9.0-1 Tool for visualizing, processing and analysing of bioimages
  • libgrib-api-data

    1.8.0.1-1 grib_api definition files
  • libgrits4

    0.7-1 Grits is a Virtual Globe library
  • libgyoto0

    0.0.3-5 General relativistic geodesic integration and ray-tracing
  • libkst2core2

    2.0.3-1.3 kst core library
  • libkst2math2

    2.0.3-1.3 kst math library
  • libkst2widgets2

    2.0.3-1.3 kst widgets library
  • liblas-bin

    1.2.1-5 ASPRS LiDAR data translation toolset
  • liblinear-tools

    1.8+dfsg-1 Standalone applications for LIBLINEAR
  • libmed-tools

    3.0.3-3 Runtime tools to handle MED files
  • libocas-tools

    0.93-1 Standalone applications implementing the OCAS solver
  • libopenmeeg1

    2.0.0.dfsg-5 library for solving EEG and MEG forward and inverse problems
  • libroot-graf2d-postscript5.34

    5.34.00-2 Postscript/PDF renderer library for ROOT
  • libroot-proof-proofplayer5.34

    5.34.00-2 PROOF plugin for ROOT
  • libroot-proof5.34

    5.34.00-2 PROOF library for ROOT
  • librsl1

    1.42-2 TRMM Radar Software Library
  • libsilo-bin

    4.8-13 Utilities to manipulate libsilo files
  • libstxxl1

    1.3.1-4 C++ STL drop-in replacement for extremely large datasets
  • libxy-bin

    0.8-1 xylib - utilities
  • liggghts

    1.5.3-1 Open Source DEM Particle Simulation Software.
  • logcentral-tools

    2.7-1 Logging service for distributed applications
  • logcentral

    2.7-1 Logging service for distributed applications
  • loki

    2.4.7.4-4 MCMC linkage analysis on general pedigrees
  • looptools

    2.7-1 Integral Evaluator of One-loop Feynman Diagram
  • lutefisk

    1.0.5a.cleaned-1 de novo interpretation of peptide CID spectra
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  • mafft

    6.864-1 Multiple alignment program for amino acid or nucleotide sequences
  • maq

    0.7.1-5 maps short fixed-length polymorphic DNA sequence reads to reference sequences
  • maqview

    0.2.5-4 graphical read alignment viewer for short gene sequences
  • massxpert-data

    3.2.3-1 linear polymer mass spectrometry software - arch-indep data
  • massxpert

    3.2.3-1 linear polymer mass spectrometry software
  • maude

    2.6-2 high-performance logical framework
  • mayavi2

    4.1.0-1 scientific visualization package for 2-D and 3-D data
  • mbt

    3.2.8-1 memory-based tagger-generator and tagger
  • mbtserver

    0.5-2 Server extensions for the MBT tagger
  • meep-lam4

    1.1.1-10~deb7u1 software package for FDTD simulation, parallel (OpenMPI) version
  • meep-mpi-default

    1.1.1-10~deb7u1 software package for FDTD simulation, parallel (OpenMPI) version
  • meep-mpich2

    1.1.1-10~deb7u1 software package for FDTD simulation, parallel (OpenMPI) version
  • meep-openmpi

    1.1.1-9~deb7u1 software package for FDTD simulation, parallel (OpenMPI) version
  • meep

    1.1.1-8 software package for FDTD simulation
  • melting-gui

    4.3c-2 graphical interface to compute the melting temperature of nucleic acid duplex
  • melting

    4.3c-2 compute the melting temperature of nucleic acid duplex
  • merkaartor

    0.18.1-3 map editor for OpenStreetMap.org
  • minc-tools

    2.1.10-1 MNI medical image format tools
  • minisat+

    1.0-2 solver for pseudo-Boolean constraints
  • minisat2

    1:2.2.1-3 Transitional package for minisat
  • minisat

    1:2.2.1-3 Fast and lightweight SAT solver
  • mipe

    1.1-4 Tools to store PCR-derived data
  • mira-assembler

    3.4.0.1-3 Whole Genome Shotgun and EST Sequence Assembler
  • mira-examples

    3.4.0.1-3 files to experiment with the mira assembler
  • mitools

    1.8.5-2 view, convert and perform basic maths with medical image datasets
  • mlv-smile

    1.47-3 Find statistically significant patterns in sequences
  • mmass-modules

    5.1.0-2 Mass spectrometry tool for proteomics - extension modules
  • mmass

    5.1.0-2 Mass spectrometry tool for proteomics
  • mobyle-programs

    4.0-1 Program descriptions for the mobyle portal
  • mobyle-utils

    1.0.6~dfsg-1 binary tools used by Mobyle
  • mobyle

    1.0.6~dfsg-1 Web portal that provides web forms for command-line software
  • mona

    1.4-13-3 theorem prover based on automata
  • montecarlo-base

    20061220+dfsg3-2 [Physics] Common files for CERNLIB Monte Carlo libraries
  • montecarlo-data

    20061220+dfsg3-2 [Physics] data for CERNLIB Monte Carlo libraries
  • mopac7-bin

    1.15-5 Semi-empirical Quantum Chemistry Library (binaries)
  • morse-simulator-data

    0.5.2-1 Multi-OpenRobot Simulation Engine
  • morse-simulator

    0.5.2-1 Multi-OpenRobot Simulation Engine
  • mothur

    1.24.1-1 sequence analysis suite for research on microbiota
  • mozilla-biofox

    1.6-1 extension of bioinformatics tools to Iceape and Iceweasel browsers
  • mpb-mpi

    1.4.2-18 MIT Photonic-Bands, parallel (mpich) version
  • mpb

    1.4.2-18 MIT Photonic-Bands
  • mpqc-openmpi

    2.3.1-14 Massively Parallel Quantum Chemistry Program (OpenMPI transitional package)
  • mpqc-support

    2.3.1-14 Massively Parallel Quantum Chemistry Program (support tools)
  • mpqc

    2.3.1-14 Massively Parallel Quantum Chemistry Program
  • mrbayes-mpi

    3.2.1+dfsg-1 Bayesian Inference of Phylogeny - mpi version
  • mrbayes

    3.2.1+dfsg-1 Bayesian Inference of Phylogeny
  • mriconvert

    2.0.235-1 medical image file conversion utility
  • mricron-data

    0.20120505.1~dfsg.1-1 data files for MRIcron
  • mricron

    0.20120505.1~dfsg.1-1 magnetic resonance image conversion, viewing and analysis
  • mrtrix

    0.2.10-2 diffusion-weighted MRI white matter tractography
  • mummer

    3.23~dfsg-2 Efficient sequence alignment of full genomes
  • muscle

    1:3.8.31-1 Multiple alignment program of protein sequences
  • music-bin

    1.0.7-1.2 Multi-Simulation Coordinator for MPI -- Utilities
  • mustang-testdata

    3.2.1-3 multiple structural alignment of proteins, test data
  • mustang

    3.2.1-3 multiple structural alignment of proteins
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  • ncbi-blast+-legacy

    2.2.26-3 NCBI Blast legacy call script
  • ncbi-blast+

    2.2.26-3 next generation suite of BLAST sequence search tools
  • ncbi-epcr

    2.3.12-1-1 Tool to test a DNA sequence for the presence of sequence tagged sites
  • ncbi-rrna-data

    6.1.20120620-2 large rRNA BLAST databases distributed with the NCBI toolkit
  • ncbi-tools-bin

    6.1.20120620-2 NCBI libraries for biology applications (text-based utilities)
  • ncbi-tools-x11

    6.1.20120620-2 NCBI libraries for biology applications (X-based utilities)
  • nco

    4.0.9-1 command-line operators to analyze netCDF files
  • ncoils

    2002-3 coiled coil secondary structure prediction
  • ncview

    1.93g-1 A X11 visual browser for NetCDF format files
  • necpp

    1.5.0+cvs20101003-2.1 NEC2 Evolution Antenna Modelling System
  • neobio

    0.0.20030929-1 pairwise sequence alignments
  • netcdf-bin

    1:4.1.3-6 Programs for reading and writing NetCDF files
  • nexus-tools

    4.2.1-svn1614-1 NeXus scientific data file format - applications
  • njplot

    2.4-1 phylogenetic tree drawing program
  • numdiff

    5.6.0-1 Compare similar files with numeric fields.
  • nwchem-data

    6.1-6 High-performance computational chemistry software (data files)
  • nwchem

    6.1-6 High-performance computational chemistry software
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  • oar-admin

    2.5.2-3 OAR batch scheduler administration tools package
  • oar-api

    2.5.2-3 transitional dummy package
  • oar-common

    2.5.2-3 OAR batch scheduler common package
  • oar-node

    2.5.2-3 OAR batch scheduler node package
  • oar-restful-api

    2.5.2-3 OAR RESTful API
  • oar-server-mysql

    2.5.2-3 OAR batch scheduler MySQL server backend package
  • oar-server-pgsql

    2.5.2-3 OAR batch scheduler PostgreSQL server backend package
  • oar-server

    2.5.2-3 OAR batch scheduler server package
  • oar-user-mysql

    2.5.2-3 OAR batch scheduler MySQL user backend package
  • oar-user-pgsql

    2.5.2-3 OAR batch scheduler PostgreSQL user backend package
  • oar-user

    2.5.2-3 OAR batch scheduler user package
  • oar-web-status

    2.5.2-3 OAR batch scheduler visualization tool package
  • oasis3-examples

    3.3.beta.dfsg.1-8 Example models for the OASIS climate model coupler
  • oasis3

    3.3.beta.dfsg.1-8 Coupler for exchanging fields between components of Earth system models
  • obdgpslogger

    0.16-1.2 suite of tools to log OBDII and GPS data
  • objcryst-fox

    1.9.6.0-2 Free Objects for Xtallography
  • oce-draw

    0.9.1-3 OpenCASCADE Community Edition CAE platform shared library
  • octave-biosig

    1.3.0-2 Octave bindings for BioSig library
  • octave-gdf

    0.1.2-2 IO library for the GDF -- Octave interface
  • octave-lhapdf

    5.8.7+repack-1 Octave Bindings for LHAPDF
  • octave-psychtoolbox-3

    3.0.9+svn2579.dfsg1-1 toolbox for vision research -- Octave bindings
  • odin

    1.8.5-2 develop, simulate and run magnetic resonance sequences
  • ogdi-bin

    3.2.0~beta2-7 Open Geographic Datastore Interface Library -- utilities
  • openbabel-gui

    2.3.1+dfsg-4 Chemical toolbox utilities (graphical user interface)
  • openbabel

    2.3.1+dfsg-4 Chemical toolbox utilities (cli)
  • opencascade-draw

    6.5.0.dfsg-2 OpenCASCADE CAE platform shared library
  • openmeeg-tools

    2.0.0.dfsg-5 openmeeg library -- command line tools
  • openmx

    3.5-1 Package for nano-scale material simulations
  • openrocket

    12.03-1 Model Rocket Simulator
  • openturns-examples

    1.0-4 examples of OpenTURNS functionalities
  • openturns-validation

    1.0-4 validation files for OpenTURNS
  • openuniverse-common

    1.0beta3.1+dfsg-3 3D Universe Simulator data files
  • openuniverse

    1.0beta3.1+dfsg-3 3D Universe Simulator
  • openwalnut-modules

    1.2.5-1.1 Multi-modal medical and brain data visualization tool.
  • openwalnut-qt4

    1.2.5-1.1 Multi-modal medical and brain data visualization tool.
  • opj2dat

    20080225-2.1 OriginLab Origin project files to data files converter
  • optgeo

    2.11-3 simulator for geometrical optics
  • opticalraytracer

    3.2-1.1 Virtual lens design workshop
  • origami

    0.7.4-1 command-line management tool for Folding @ Home clients
  • ossim-core

    1.7.21-4 The OSSIM core utilities
  • otf-trace

    1.10.2+dfsg-2 Open Trace Format support library - development files
  • ovito

    0.9.5-2 visualization and analysis tool for atomistic simulation data
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  • paje.app

    1.98-1 generic visualization tool (Gantt chart and more)
  • paraview

    3.14.1-6 Parallel Visualization Application
  • paw-common

    1:2.14.04.dfsg.2-8 Physics Analysis Workstation (common files)
  • paw-demos

    1:2.14.04.dfsg.2-8 Physics Analysis Workstation examples and tests
  • pdb2pqr

    1.8-1 Preparation of protein structures for electrostatics calculations
  • pegasus-wms

    4.0.1+dfsg-8 Scientific workflow management system for Condor
  • perlprimer

    1.1.21-1 Graphical design of primers for PCR
  • phyml

    2:20110919-1 Phylogenetic estimation using Maximum Likelihood
  • picard-tools

    1.46-1 Command line tools to manipulate SAM and BAM files
  • picosat

    936-4 SAT solver with proof and core support
  • planets

    0.1.13-13 Gravitation simulation of planetary bodies
  • plastimatch

    1.5.11+dfsg0-1 medical image reconstruction and registration
  • plink

    1.07-3 whole-genome association analysis toolset
  • poa

    2.0+20060928-3 Partial Order Alignment for multiple sequence alignment
  • populations

    1.2.33+svn0120106-2.1 population genetic software
  • pp-popularity-contest

    1.0.5-1 PredictProtein popularity contest
  • praat

    5.3.16-1 program for speech analysis and synthesis
  • primer3

    2.2.3-1 Tool to design flanking oligo nucleotides for DNA amplification
  • probalign

    1.4-2 multiple sequence alignment using partition function posterior probabilities
  • probcons-extra

    1.12-9 Extra programs from the probcons package
  • probcons

    1.12-9 PROBabilistic CONSistency-based multiple sequence alignment
  • proda

    1.0-8 multiple alignment of protein sequences
  • profnet-bval

    1.0.21-1+wheezy1 neural network architecture for profbval
  • profnet-chop

    1.0.21-1+wheezy1 neural network architecture for profchop
  • profnet-con

    1.0.21-1+wheezy1 neural network architecture for profcon
  • profnet-isis

    1.0.21-1+wheezy1 neural network architecture for profisis
  • profnet-md

    1.0.21-1+wheezy1 neural network architecture for metadisorder
  • profnet-norsnet

    1.0.21-1+wheezy1 neural network architecture for norsnet
  • profnet-prof

    1.0.21-1+wheezy1 neural network architecture for profacc
  • profnet-snapfun

    1.0.21-1+wheezy1 neural network architecture for snapfun
  • profphd-net

    1.0.21-1+wheezy1 neural network architecture for profphd
  • profphd-utils

    1.0.9-1 profphd helper utilities convert_seq and filter_hssp
  • profphd

    1.0.39-1 secondary structure and solvent accessibility predictor
  • proftmb

    1.1.10-1 per-residue prediction of bacterial transmembrane beta barrels
  • proj-bin

    4.7.0-2 Cartographic projection library (tools)
  • psi3

    3.4.0-4 Quantum Chemical Program Suite
  • psychopy

    rsion: 2.6, 2.7 environment for creating psychology stimuli in Python
  • psychtoolbox-3-common

    3.0.9+svn2579.dfsg1-1 toolbox for vision research -- arch/interpreter independent part
  • psychtoolbox-3-lib

    3.0.9+svn2579.dfsg1-1 toolbox for vision research -- arch-specific parts
  • pyfai

    0.3.5-1 python library for Fast Azimuthal Integration
  • pyformex-lib

    0.8.6-4 program to create 3D geometry from Python scripts.
  • pyformex

    0.8.6-4 program to create 3D geometry from Python scripts.
  • pymca-data

    4.6.0-2 Architecture independent data files for PyMca
  • pymca

    4.6.0-2 Python applications and toolkit for X-ray fluorescence analysis
  • pymol

    rsion: 2.7 Molecular Graphics System
  • pythia8-data

    8.1.65-1 PYTHIA8 data files
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  • qfits-tools

    6.2.0-5 FITS manipulation tools
  • qgis-api-doc

    1.7.4+1.7.5~20120320-1.1 Quantum GIS API documentation
  • qgis-common

    1.7.4+1.7.5~20120320-1.1 Quantum GIS - architecture-independent data
  • qgis-plugin-grass-common

    1.7.4+1.7.5~20120320-1.1 GRASS plugin for Quantum GIS - architecture-independent data
  • qgis-providers-common

    1.7.4+1.7.5~20120320-1.1 collection of data providers to Quantum GIS - architecture-independent files
  • qiime

    rsion: 2.6, 2.7 Quantitative Insights Into Microbial Ecology
  • qmc

    0.94-3 Quine McClusky Simplification Tool
  • qtdmm

    0.8.13-3 GUI for digital multimeter
  • qthid-fcd-controller

    3.1-5 Funcube Dongle controller
  • quantum-espresso-data

    5.0-1 Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation)
  • quantum-espresso

    5.0-1 Electronic-Structure and Ab-Initio Molecular Dynamics Suite
  • quitcount

    2.0-1 Small tool which may help yourself quit smoking
  • qutemol

    0.4.1~cvs20081111-2 interactive visualization of macromolecules
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  • rasmol

    2.7.5.2-1 Visualize biological macromolecules
  • raster3d

    3.0-2-4 tools for generating images of proteins or other molecules
  • rdkit-data

    201203-3 Collection of cheminformatics and machine-learning software (data files)
  • readseq

    1-9 Conversion between sequence formats
  • reprof

    1.0.1-1 protein secondary structure and accessibility predictor
  • rivet-plugins-data

    1.8.0-1 Data files of Rivet analysis plugins
  • rivet-plugins-dev

    1.8.0-1 Template generator of Rivet analysis plugin
  • rivet-plugins

    1.8.0-1 Analysis plugins of Rivet
  • rivet-root-converter

    1.8.0-1 Rivet and ROOT file format converter
  • rivet

    1.8.0-1 Robust Independent Validation of Experiment and Theory
  • rnahybrid

    2.1.1-1 Fast and effective prediction of microRNA/target duplexes
  • robot-player-dev

    3.0.2+dfsg-4 Networked server for robots and sensors - development package
  • robot-player

    3.0.2+dfsg-4 Networked server for robots and sensors
  • root-plugin-geom-gdml

    5.34.00-2 GDML import/export module for ROOT geometries
  • root-plugin-geom-geombuilder

    5.34.00-2 Geometry builder plugin for ROOT
  • root-plugin-geom-geompainter

    5.34.00-2 Geometry painter plugin for ROOT
  • root-plugin-graf2d-asimage

    5.34.00-2 AfterImage plugin for ROOT
  • root-plugin-graf2d-qt

    5.34.00-2 Graf2d Qt plugin for ROOT
  • root-plugin-graf2d-x11

    5.34.00-2 X window system plugin for ROOT
  • root-plugin-graf3d-x3d

    5.34.00-2 X 3D plugin for ROOT
  • root-plugin-gui-fitpanel

    5.34.00-2 GUI element for fits plugin for ROOT
  • root-plugin-gui-guibuilder

    5.34.00-2 GUI editor plug-in for ROOT
  • root-plugin-gui-qt

    5.34.00-2 Qt plugin for ROOT
  • root-plugin-gui-sessionviewer

    5.34.00-2 GUI to browse an interactive PROOF session
  • root-plugin-hist-hbook

    5.34.00-2 Hbook plugin for ROOT
  • root-plugin-hist-histpainter

    5.34.00-2 Histogram painter plugin for ROOT
  • root-plugin-hist-spectrumpainter

    5.34.00-2 Spectrum painter plugin for ROOT
  • root-plugin-io-sql

    5.34.00-2 SQL plugin for ROOT
  • root-plugin-io-xml

    5.34.00-2 XML reader plugin for ROOT
  • root-plugin-math-fftw3

    5.34.00-2 FFTw plugin for ROOT
  • root-plugin-math-fumili

    5.34.00-2 Fumili plugin for ROOT
  • root-plugin-math-minuit2

    5.34.00-2 Minuit version 2 plugin for ROOT
  • root-plugin-montecarlo-pythia8

    5.34.00-2 Pythia version 8 plugin for ROOT
  • root-plugin-net-globus

    5.34.00-2 Globus plugin for ROOT
  • root-plugin-net-krb5

    5.34.00-2 Kerberos (version 5) plugin for ROOT
  • root-plugin-proof-peac

    5.34.00-2 PEAC plugin for ROOT - run-time libraries
  • root-plugin-sql-mysql

    5.34.00-2 MySQL client plugin for ROOT
  • root-plugin-sql-odbc

    5.34.00-2 ODBC plugin for ROOT
  • root-plugin-sql-pgsql

    5.34.00-2 PostgreSQL client plugin for ROOT
  • root-plugin-tree-treeviewer

    5.34.00-2 GUI to browse a ROOT tree
  • root-system-bin

    5.34.00-2 Numerical data analysis framework - general applications
  • root-system-common

    5.34.00-2 Common files for ROOT
  • root-system-proofd

    5.34.00-2 Parallel ROOt Facility - distributed, parallel computing
  • root-system-rootd

    5.34.00-2 ROOT remote file server
  • root-system

    5.34.00-2 metapackage to install all ROOT packages
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  • saint

    2.3.3-1 Significance Analysis of INTeractome
  • samtools

    0.1.18-1 processing sequence alignments in SAM and BAM formats
  • saods9-blt

    7.0.1+dfsg-1 BLT subpackage for saods9
  • saods9-data

    7.0.1+dfsg-1 Image display tool for astronomy (shared data)
  • saods9

    7.0.1+dfsg-1 Image display tool for astronomy
  • sat4j

    2.3.1-1 Efficient library of SAT solvers in Java
  • savi

    1.4.5-4 satellite constellation visualisation
  • science-astronomy-dev

    1.0 Debian Science Astronomy-dev packages
  • science-astronomy

    1.0 Debian Science Astronomy packages
  • science-biology

    1.0 Debian Science Biology packages
  • science-chemistry

    1.0 Debian Science Chemistry packages
  • science-config

    1.0 Debian Science Project config package
  • science-dataacquisition-dev

    1.0 Debian Science data acquisition development packages
  • science-dataacquisition

    1.0 Debian Science data acquisition packages
  • science-distributedcomputing

    1.0 Debian Science Distributed Computing packages
  • science-electronics

    1.0 Debian Science Electronics packages
  • science-electrophysiology

    1.0 Debian Science packages for Electrophysiology
  • science-engineering-dev

    1.0 Debian Science Engineering-dev packages
  • science-engineering

    1.0 Debian Science Engineering packages
  • science-geography

    1.0 Debian Science Geography packages
  • science-highenergy-physics-dev

    1.0 Debian Science High Energy Physics development packages
  • science-highenergy-physics

    1.0 Debian Science High Energy Physics packages
  • science-imageanalysis

    1.0 Debian Science image analysis packages
  • science-linguistics

    1.0 Debian Science Linguistics packages
  • science-machine-learning

    1.0 Debian Science Machine Learning packages
  • science-mathematics-dev

    1.0 Debian Science Mathematics-dev packages
  • science-mathematics

    1.0 Debian Science Mathematics packages
  • science-meteorology-dev

    1.0 Debian Science Meteorology-dev packages
  • science-meteorology

    1.0 Debian Science Meteorology packages
  • science-nanoscale-physics-dev

    1.0 Debian Science Nanoscale Physics development packages
  • science-nanoscale-physics

    1.0 Debian Science Nanoscale Physics packages
  • science-neuroscience-cognitive

    1.0 Debian Science packages for Cognitive Neuroscience
  • science-neuroscience-modeling

    1.0 Debian Science packages for modeling of neural systems
  • science-numericalcomputation

    1.0 Debian Science Numerical Computation packages
  • science-physics-dev

    1.0 Debian Science Physics-dev packages
  • science-physics

    1.0 Debian Science Physics packages
  • science-psychophysics

    1.0 Debian Science packages for Psychophysics
  • science-robotics

    1.0 Debian Robotics packages
  • science-simulations

    1.0 Debian Science Simulation packages
  • science-statistics

    1.0 Debian Science Statistics packages
  • science-tasks

    1.0 Debian Science tasks for tasksel
  • science-typesetting

    1.0 Debian Science typesetting packages
  • science-viewing

    1.0 Debian Science data visualisation packages
  • seesat5

    0.90.10-1.1 a satellite location program
  • seqan-apps

    1.3.1-1 C++ library for the analysis of biological sequences
  • sextractor

    2.8.6+dfsg-1 Source extractor for astronomical images
  • shelxle

    1.0.564-1 graphical user interface for SHELXL
  • sibsim4

    0.20-1 align expressed RNA sequences on a DNA template
  • sigma-align

    1.1.3-3 Simple greedy multiple alignment of non-coding DNA sequences
  • sigviewer

    0.5.1+svn556-1+b1 GUI viewer for biosignals such as EEG, EMG, and ECG
  • sim4

    0.0.20030921-3 tool for aligning cDNA and genomic DNA
  • simgrid

    3.7.1-1 Toolkit for scalable simulation of distributed applications
  • slang-xfig

    0.2.0~.35-1.1 produce plots and drawings through Xfig's fig2dev in S-Lang
  • spass

    3.7-3 An automated theorem prover for first-order logic with equality
  • spd

    1.3.0-1 Synchrotron image corrections and azimuthal integration
  • squizz

    0.99a-2 Converter for genetic sequences and alignments
  • ssake-examples

    3.8-2 example data for SSAKE, a genomic assembler of short reads
  • ssake

    3.8-2 genomics application for assembling millions of very short DNA sequences
  • staden-io-lib-utils

    1.12.4-1 programs for maniuplating DNA sequencing files
  • stardata-common

    0.8 Common framework to manage astronomy packages
  • starplot

    0.95.5-4 3-dimensional perspective star map viewer
  • starpu-examples

    1.0.1+dfsg-1 Task scheduler for heterogeneous multicore machines - exs
  • stellarium-data

    0.11.3-1+deb7u1 Stellarium data files
  • stellarium

    0.11.3-1+deb7u1 real-time photo-realistic sky generator
  • step

    4:4.8.4-1 interactive physical simulator for KDE
  • stimfit

    0.10.18-1.1 A program for viewing and analyzing electrophysiological data
  • sumo

    0.15.0~dfsg-2 Simulation of Urban MObility (SUMO)
  • survex-aven

    1.2.6-4 sophisticated cave survey viewer for Survex
  • survex-svxedit

    1.2.6-4 survey data editor for Survex
  • survex

    1.2.6-4 cave surveying and mapping software
  • swe-basic-data

    1.77.00.0005-2 basic data files for the libswe package
  • swe-standard-data

    00004-1 standard data for the Swiss Ephemeris
  • syrthes

    3.4.3-dfsg1-6 Transient thermal simulations in complex solid geometries
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  • t-coffee-examples

    9.02.r1228-2 annotated examples for the use of T-Coffee
  • t-coffee

    9.02.r1228-2 Multiple Sequence Alignment
  • tabix

    0.2.6-1 generic indexer for TAB-delimited genome position files
  • tcd-utils

    20061127-2 convert Tide Constituent Database (TCD) files
  • terraintool

    1.12a-1 Generates survex format terrain models from SRTM and ASTER data
  • tessa-mpi

    0.3.1-6 simulation of 3D optical systems using FDTD on MPI clusters
  • tessa

    0.3.1-6 simulation of 3D optical systems with the FDTD method
  • thepeg-gui

    1.8.0-1 Java GUI of ThePEG
  • thepeg-reference

    1.8.0-1 Code reference of ThePEG
  • thepeg

    1.8.0-1 Toolkit for High Energy Physics Event Generation
  • therion-viewer

    5.3.9-4 Cave surveying - 3D viewer for therion models
  • therion

    5.3.9-4 Cave surveying - 2D and 3D drawing software
  • theseus

    1.6.2-2 superimpose macromolecules using maximum likelihood
  • tigr-glimmer

    3.02-2 Gene detection in archea and bacteria
  • timbl

    6.4.2-1 Tilburg Memory Based Learner
  • timblserver

    1.4-2 Server extensions for Timbl
  • tm-align

    20120507-1 structual alignment of proteins
  • transcalc

    0.14-5 microwave and RF transmission line calculator
  • transtermhp

    2.09-1 find rho-independent transcription terminators in bacterial genomes
  • tree-ppuzzle

    5.2-7 Parallelized reconstruction of phylogenetic trees by maximum likelihood
  • tree-puzzle

    5.2-7 Reconstruction of phylogenetic trees by maximum likelihood
  • treeviewx

    0.5.1+20100823-1 Displays and prints phylogenetic trees
  • tunnelx

    20110801-2.1 Cave Survey drawing software
  • twms

    0.03e-2 tiny web map service
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  • U

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  • ucto

    0.5.2-2 Unicode Tokenizer
  • udav

    0.7.1.2-3 application for data visualization based on MathGL
  • uhd-host

    3.4.2-1 universal hardware driver for Ettus Research products
  • units-filter

    3.5-2 Parser for expressions concerning physical values
  • urg-utils

    0.8.12-4 utilities for Hokuyo URG/UTM laser range scanners
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  • V

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  • v-sim-common

    3.6.0-2 Visualize atomic structures (support files)
  • v-sim-plugins

    3.6.0-2 Plugins for V_Sim (a 3D visualization package)
  • v-sim

    3.6.0-2 Visualize atomic structures
  • vcftools

    0.1.9-1 designed for working with VCF files
  • velvet-example

    1.2.03~nozlibcopy-1 Example data for the Velvet sequence assembler
  • velvet

    1.2.03~nozlibcopy-1 Nucleic acid sequence assembler for very short reads
  • veusz-helpers

    1.15-1 Architecture-specific helper module for Veusz
  • veusz

    1.15-1 2D scientific plotting application with graphical interface
  • via-bin

    2.0.4-2 tools for volumetric image analysis
  • viewmol

    2.4.1-18 A graphical front end for computational chemistry programs.
  • vistrails

    2.0.alpha~1-3 Science visualisation workflow toolkit
  • volview

    3.4-3 Advanced volume visualization tool
  • vowpal-wabbit

    6.1-1 fast and scalable online machine learning algorithm
  • voxbo

    1.8.5~svn1246-1 processing, statistical analysis, and display of brain imaging data
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  • W

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  • wcslib-tools

    4.13.4-1 Command line tools utilizing wcslib
  • wcstools

    3.8.5-1 Handle the WCS of a FITS image
  • weka

    3.6.6-1 Machine learning algorithms for data mining tasks
  • wise

    2.4.1-10 comparison of biopolymers, commonly DNA and protein sequences
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  • xbs

    0-8 3-d models and movies of molecules
  • xcrysden-data

    1.5.53-1 Crystalline and Molecular Structure Visualizer (Data Files)
  • xcrysden

    1.5.53-1 Crystalline and Molecular Structure Visualizer
  • xdrawchem

    2.0-2 Chemical structures and reactions editor
  • xflr5

    6.07+svn513-1 analysis tool for airfoils
  • xfoil

    6.97.dfsg-5 program for the design and analysis of subsonic airfoils
  • xmakemol-gl

    5.16-6 program for visualizing atomic and molecular systems (OpenGL)
  • xmakemol

    5.16-6 program for visualizing atomic and molecular systems
  • xmds

    1.6.6-7 eXtensible Multi-Dimensional Simulator
  • xpa-tools

    2.1.14-2 Tools for seamless communication between Unix programs
  • xplot-xplot.org

    0.90.7.1-2 fast tool to graph and visualize lots of data
  • xplot

    1.19-9 simple on-screen x-y column data plotter
  • xppaut

    6.11b+1.dfsg-1 Phase Plane Plus Auto: Solves many kinds of equations
  • xtide-coastline

    20020202-1 coastline data for xtide
  • xtide-data

    20100529-1 Harmonics data for xtide
  • xtide

    2.11-1 provides tide and current predictions
  • xyscan

    3.31-3 data thief for scientists
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  • Y

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  • ygraph

    0.16~cvs20090218-1.1 plot and animate data sets
  • yorick-av

    0.0.1-2 write movies from Yorick in various formats
  • yorick-cubeview

    1.6-2 3D FITS data viewer specialized in spectro-imaging
  • yorick-curses

    0.1-6 interface to the (n)curses library for the Yorick language
  • yorick-data

    2.2.02+dfsg-6 interpreted library for the Yorick language
  • yorick-dev

    2.2.02+dfsg-6 development files for the Yorick interpreted language
  • yorick-full

    2.2.02+dfsg-6 full installation of the Yorick interpreter and add-ons
  • yorick-gl

    1.1+cvs20070922+dfsg-6 OpenGL 3D graphics support for the Yorick language
  • yorick-gyoto

    0.0.3-5 General relativistic geodesic integration for the Yorick language
  • yorick-hdf5

    0.8.0-4 Hierarchical Data Format 5 interface for the Yorick language
  • yorick-imutil

    0.5.7-3 fast image manipulation routines for the Yorick language
  • yorick-mira

    0.9.10+dfsg-1 optical interferometry image reconstruction within Yorick
  • yorick-ml4

    0.6.0-3 Matlab file format support for the Yorick language
  • yorick-mpeg

    0.1-2 MPEG output support for the Yorick language
  • yorick-mpy-common

    2.2.02+dfsg-6 Message Passing Yorick (common files)
  • yorick-mpy-mpich2

    2.2.02+dfsg-6 Message Passing Yorick (MPICH2 build)
  • yorick-mpy-openmpi

    2.2.02+dfsg-6 Message Passing Yorick (OpenMPI build)
  • yorick-optimpack

    1.3.2+dfsg-1 optimization of large scale problems for the Yorick language
  • yorick-soy

    1.4.0-3 sparse matrix operations for the Yorick language
  • yorick-spydr

    0.8.2-3 FITS image display and simple analysis
  • yorick-svipc

    0.14-2 interprocess communication (shared memory...) for Yorick
  • yorick-yao

    4.9.1-2 Yorick-based adaptive optics system simulator
  • yorick-yeti-fftw

    6.3.2-3 FFT plugin for the Yorick language
  • yorick-yeti-gsl

    6.3.2-3 GSL special functions plugin for the Yorick language
  • yorick-yeti-regex

    6.3.2-3 POSIX regular expressions for the Yorick language
  • yorick-yeti-tiff

    6.3.2-3 TIFF image format input for the Yorick language
  • yorick-yeti

    6.3.2-3 utility plugin for the Yorick language
  • yorick-yutils

    1.5.2-1 various utilities for the Yorick language
  • yorick-z

    1.2.0+cvs20080115-5 zlib, jpeg and png support for the Yorick language
  • yorick

    2.2.02+dfsg-6 interpreted language and scientific graphics
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  • Z

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  • z88-data

    13.0.0+dfsg2-3 Finite Element Analysis Program - data
  • z88

    13.0.0+dfsg2-3 Finite Element Analysis Program - runtime
  • zimpl

    3.2.0+dfsg-2 mathematical modeling language for optimization problems
Last modified on Saturday, 22 March 2014 09:50

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