Science Packages
Science related packages
To install Raspberry Pi OS software on a Raspberry Pi
Packages are installed using Terminal. First get an updated package list by entering the following command in to terminal if this has not been done today sudo apt update
Then install your chosen package with the command sudo apt install package name
Find out more with the Guide to installing software with the apt command
Distro Version:
The latest Distro for Raspberry Pi OS is Buster, the previouse version was Stretch. Next to each package is the version available for each distro.
Buster(#) = Raspberry Pi OS Buster
Stretch(#) = Raspberry Pi OS Stretch
Buster & Stretch(#) = same version for both.
If only one Distro is listed then the package is only available on that distribution.
SCIENCE
Last Updated: 27 December, 2020
3depict
Buster:(0.0.21-1) Stretch:(0.0.19-1) visualisation and analysis for single valued point data www- Back to top
A
abacas
Buster:(1.3.1-5) Stretch:(1.3.1-3) close gaps in genomic alignments from short reads wwwabinit
Buster:(8.8.4-2) Stretch:(8.0.8-1) package for electronic structure calculations wwwabyss
Buster:(2.1.5-7) Stretch:(2.0.2-2) de novo, parallel, sequence assembler for short reads wwwacedb-other
Buster:(4.9.39+dfsg.02-4) Stretch:(4.9.39+dfsg.02-1) retrieval of DNA or protein sequences wwwacedb-other-belvu
Buster:(4.9.39+dfsg.02-4) Stretch:(4.9.39+dfsg.02-1) transitional package for belvu wwwacedb-other-dotter
Buster:(4.9.39+dfsg.02-4) Stretch:(4.9.39+dfsg.02-1) transitional package for dotter wwwaces3
Buster:(3.0.8-6) Stretch:(3.0.8-5.1+rpi1) Advanced Concepts in Electronic Structure III wwwaces3-data
Buster:(3.0.8-6) Stretch:(3.0.8-5.1+rpi1) Advanced Concepts in Electronic Structure III wwwachilles
Buster:(2-9) Stretch:(2-8.2) Artificial life and evolution simulator wwwadapterremoval
Buster:(2.2.3-1) Stretch:(2.2.0-1) rapid adapter trimming, identification, and read merging of gene sequences wwwadapterremoval-examples
Buster:(2.2.3-1) Stretch:(2.2.0-1) rapid adapter trimming, identification, and read merging (example data) wwwadms
Buster:(2.3.6-2) Automatic device model synthesizer for Verilog-AMS wwwadun-core
Buster:(0.81-13) Stretch:(0.81-9+b1) Molecular Simulator wwwadun.app
Buster:(0.81-13) Stretch:(0.81-9+b1) Molecular Simulator for GNUstep (GUI) wwwaegean
Buster:(0.16.0+dfsg-1) Stretch:(0.15.2+dfsg-1) integrated genome analysis toolkit wwwaeskulap
Buster:(0.2.2-beta2+git20180219.8787e95-2) Stretch:(0.2.2b1+git20161206-1) medical image viewer and DICOM network client wwwaevol
Buster:(5.0-2) Stretch:(4.4-1) digital genetics model to run Evolution Experiments in silico wwwaghermann
Buster:(1.1.2-2) Stretch:(1.1.2-1) Sleep-research experiment manager wwwaladin
Buster:(10.076+dfsg-1) Interactive sky atlas for astronomical images and datasets wwwalfa
Buster:(1.0-3+b1) Stretch:(1.0-2) Automated Line Fitting Algorithm wwwalgotutor
Buster:(0.8.6-2) Stretch:(0.8.6-1) program for observing the intermediate steps of algorithm wwwalien-hunter
Buster:(1.7-7) Stretch:(1.7-5) Interpolated Variable Order Motifs to identify horizontally acquired DNA wwwaltree
Buster:(1.3.1-7+b1) Stretch:(1.3.1-4+b2) program to perform phylogeny-based association and localization analysis wwwaltree-examples
Buster:(1.3.1-7) Stretch:(1.3.1-4) example files for ALTree wwwamap-align
Buster:(2.2+git20080214.600fc29+dfsg-1) Stretch:(2.2-6) Protein multiple alignment by sequence annealing wwwampliconnoise
Buster:(1.29-8) Stretch:(1.29-6) removal of noise from 454 sequenced PCR amplicons wwwandi
Buster:(0.12-4) Stretch:(0.10-2) Efficient Estimation of Evolutionary Distances wwwanfo
Buster:(0.98-7+b1) Stretch:(0.98-5) Short Read Aligner/Mapper from MPG wwwaoflagger
Buster:(2.13.0-1) Stretch:(2.9.0-1) Find RFI in radio astronomical observations wwwapbs
Buster & Stretch:(1.4-1) Adaptive Poisson Boltzmann Solver wwwapertium
Buster:(3.5.2-1) Stretch:(3.4.0~r61013-5) Shallow-transfer machine translation engine wwwapertium-af-nl
Buster:(0.2.0~r58256-2) Stretch:(0.2.0~r58256-1) Apertium translation data for the Afrikaans-Dutch pair wwwapertium-all-dev
Buster:(3.5.2-1) Metapackage for all tools required for Apertium development wwwapertium-apy
Buster:(0.11.4-2) Stretch:(0.9.1~r343-2) Apertium APY service wwwapertium-arg
Buster:(0.1.2~r65494-2) Stretch:(0.1.2~r65494-1) Apertium single language data for Aragonese wwwapertium-arg-cat
Buster:(0.1.0~r64925-2) Stretch:(0.1.0~r64925-1) Apertium translation data for the Aragonese-Catalan pair wwwapertium-bel
Buster:(0.1.0~r81357-2) Apertium single language data for Belarusian wwwapertium-bel-rus
Buster:(0.2.0~r81186-2) Apertium translation data for the Belarusian-Russian pair wwwapertium-br-fr
Buster:(0.5.0~r61325-3) Stretch:(0.5.0~r61325-2) Apertium linguistic data to translate between Breton and French wwwapertium-ca-it
Buster:(0.1.1~r57554-2) Stretch:(0.1.1~r57554-1) Apertium translation data for the Catalan-Italian pair wwwapertium-cat
Buster:(2.6.0-1) Stretch:(1.0.0~r65787-1) Apertium single language data for Catalan wwwapertium-cat-srd
Buster:(1.0.0~r82995-2) Apertium translation data for the Catalan-Sardinian pair wwwapertium-crh
Buster:(0.2.0~r83161-2) Apertium single language data for Crimean Tatar wwwapertium-crh-tur
Buster:(0.3.0~r83159-2) Apertium translation data for the Crimean Tatar-Turkish pair wwwapertium-cy-en
Buster:(0.1.1~r57554-4) Stretch:(0.1.1~r57554-3) Apertium translation data for the Welsh-English pair wwwapertium-dan
Buster:(0.5.0~r67099-2) Stretch:(0.5.0~r67099-1) Apertium single language data for Danish wwwapertium-dan-nor
Buster:(1.3.0~r67099-2) Stretch:(1.3.0~r67099-1) Apertium translation data for the Danish-Norwegian pair wwwapertium-dev
Buster:(3.5.2-1) Stretch:(3.4.0~r61013-5) Development tools and library for Apertium wwwapertium-en-gl
Buster:(0.5.2~r57551-2) Stretch:(0.5.2~r57551-1) Apertium translation data for the English-Galician pair wwwapertium-eo-en
Buster:(1.0.0~r63833-2) Stretch:(1.0.0~r63833-1) Apertium linguistic data to translate between Esperanto and English wwwapertium-eo-fr
Buster:(0.9.0~r57551-2) Stretch:(0.9.0~r57551-1) Apertium translation data for the Esperanto-French pair wwwapertium-es-ast
Buster:(1.1.0~r51165-2) Stretch:(1.1.0~r51165-1) Apertium translation data for the Spanish-Asturian pair wwwapertium-es-it
Buster:(0.2.0~r78826-2) Stretch:(0.1.0~r51165-1) Transitional dummy package for apertium-spa-ita wwwapertium-eu-en
Buster:(0.3.1~r56205-2) Stretch:(0.3.1~r56205-1) Apertium translation data for the Basque-English pair wwwapertium-fra
Buster:(1.5.0-1) Stretch:(1.0.0~r65786-1) Apertium single language data for French wwwapertium-fra-cat
Buster:(1.5.0-1) Stretch:(1.1.0~r64309-1) Apertium translation data for the French-Catalan pair wwwapertium-hbs
Buster:(0.5.0~r68212-3) Stretch:(0.5.0~r68212-2) Apertium single language data for Serbo-Croatian wwwapertium-hbs-eng
Buster:(0.1.0~r57598-2) Stretch:(0.1.0~r57598-1) Apertium translation data for the Serbo-Croatian - English pair wwwapertium-hbs-mkd
Buster:(0.1.0~r76450-2.1) Stretch:(0.1.0~r57554-1) Apertium translation data for the Serbo-Croatian-Macedonian pair wwwapertium-hbs-slv
Buster:(0.1.0~r59294-2) Stretch:(0.1.0~r59294-1) Apertium translation data for the Serbo-Croatian-Slovenian pair wwwapertium-hin
Buster:(0.1.0~r59158-2) Stretch:(0.1.0~r59158-1) Apertium single language data for Hindi wwwapertium-id-ms
Buster:(0.1.1~r57551-2) Stretch:(0.1.1~r57551-1) Apertium translation data for the Indonesian-Malay pair wwwapertium-is-sv
Buster:(0.1.0~r76450-2) Stretch:(0.1.0~r56030-1) Apertium translation data for the Icelandic-Swedish pair wwwapertium-isl
Buster:(0.1.0~r65494-2) Stretch:(0.1.0~r65494-1) Apertium single language data for Icelandic wwwapertium-isl-eng
Buster:(0.1.0~r66083-2) Stretch:(0.1.0~r66083-1) Apertium translation data for the Icelandic-English pair wwwapertium-ita
Buster:(0.10.0~r82237-2) Stretch:(0.9.0~r72553-1) Apertium single language data for Italian wwwapertium-kaz
Buster:(0.1.0~r61338-2) Stretch:(0.1.0~r61338-1) Apertium single language data for Kazakh wwwapertium-kaz-tat
Buster:(0.2.1~r57554-2) Stretch:(0.2.1~r57554-1) Apertium translation data for the Kazakh-Tatar pair wwwapertium-lex-tools
Buster:(0.2.1-1) Stretch:(0.1.1~r66150-1) Constraint-based lexical selection module wwwapertium-mk-bg
Buster:(0.2.0~r49489-2) Stretch:(0.2.0~r49489-1) Apertium translation data for the Macedonian-Bulgarian pair wwwapertium-mk-en
Buster:(0.1.1~r57554-2) Stretch:(0.1.1~r57554-1) Apertium translation data for the Macedonian-English pair wwwapertium-mlt-ara
Buster:(0.2.0~r62623-2) Stretch:(0.2.0~r62623-1) Apertium translation data for the Maltese-Arabic pair wwwapertium-nno
Buster:(0.9.0~r69513-3) Stretch:(0.9.0~r69513-1) Apertium single language data for Norwegian Nynorsk wwwapertium-nno-nob
Buster:(1.1.0~r66076-2) Stretch:(1.1.0~r66076-1) Apertium translation data for the Norwegian Nynorsk-Norwegian Bokmål pair wwwapertium-nob
Buster:(0.9.0~r69513-2) Stretch:(0.9.0~r69513-1) Apertium single language data for Norwegian Bokmål wwwapertium-oci
Buster:(0.1.0-1) Apertium single language data for Occitan wwwapertium-pol
Buster:(0.1.1-1) Apertium single language data for Polish wwwapertium-rus
Buster:(0.2.0~r82706-1) Apertium single language data for Russian wwwapertium-separable
Buster:(0.3.2-1) Reordering separable/discontiguous multiwords wwwapertium-sme-nob
Buster:(0.6.0~r61921-2) Stretch:(0.6.0~r61921-1) Apertium translation data for the Northern Sami-Norwegian Bokmål pair wwwapertium-spa
Buster:(1.1.0~r79716-2) Stretch:(0.1.0~r65494-1) Apertium single language data for Spanish wwwapertium-spa-arg
Buster:(0.4.0~r64399-2) Stretch:(0.4.0~r64399-1) Apertium translation data for the Spanish-Aragonese pair wwwapertium-spa-cat
Buster:(2.1.0~r79717-2) Apertium translation data for the Spanish-Catalan pair wwwapertium-spa-ita
Buster:(0.2.0~r78826-2) Apertium translation data for the Spanish-Italian pair wwwapertium-srd
Buster:(1.2.0~r82994-2) Stretch:(0.9.0~r72792-1) Apertium single language data for Sardinian wwwapertium-srd-ita
Buster:(0.9.5~r82237-2) Stretch:(0.9.0~r72554-1) Apertium translation data for the Sardinian-Italian pair wwwapertium-swe
Buster:(0.7.0~r69513-2) Stretch:(0.7.0~r69513-1) Apertium single language data for Swedish wwwapertium-swe-dan
Buster:(0.7.0~r66063-2) Stretch:(0.7.0~r66063-1) Apertium translation data for the Swedish-Danish pair wwwapertium-swe-nor
Buster:(0.2.0~r69544-2) Apertium translation data for the Swedish-Norwegian pair wwwapertium-szl
Buster:(0.1.0-1) Apertium single language data for Silesian wwwapertium-tat
Buster:(0.1.0~r60887-2) Stretch:(0.1.0~r60887-1) Apertium single language data for Tatar wwwapertium-tur
Buster:(0.2.0~r83161-2) Apertium single language data for Turkish wwwapertium-ukr
Buster:(0.1.0~r82563-2) Apertium single language data for Ukrainian wwwapertium-urd
Buster:(0.1.0~r61311-2) Stretch:(0.1.0~r61311-1) Apertium single language data for Urdu wwwapertium-urd-hin
Buster:(0.1.0~r64379-2) Stretch:(0.1.0~r64379-1) Apertium translation data for the Urdu-Hindi pair wwwaragorn
Buster:(1.2.38-2) Stretch:(1.2.38-1) tRNA and tmRNA detection in nucleotide sequences wwwarb-common
Buster:(6.0.6-4) Stretch:(6.0.6-1) phylogenetic sequence analysis suite - common files wwwarden
Buster:(1.0-4) Stretch:(1.0-3) specificity control for read alignments using an artificial reference wwwart-nextgen-simulation-tools
Buster:(20160605+dfsg-3) Stretch:(20160605+dfsg-2) simulation tools to generate synthetic next-generation sequencing reads wwwart-nextgen-simulation-tools-profiles
Buster:(20160605+dfsg-3) Stretch:(20160605+dfsg-2) profiles for art simulation tools wwwartfastqgenerator
Buster:(0.0.20150519-3) Stretch:(0.0.20150519-2) outputs artificial FASTQ files derived from a reference genome wwwartfastqgenerator-examples
Buster:(0.0.20150519-3) Stretch:(0.0.20150519-2) ou7puts artificial FASTQ files derived from a reference genome (examples) wwwasdftool
Buster:(2.3.2-2) Stretch:(1.2.1-2) Command line tool to manipulate ASDF scientific data files wwwase
Buster:(3.17.0-2) Atomic Simulation Environment wwwask
Buster:(1.1.1-3) Stretch:(1.1.1-1) Adaptive Sampling Kit for big experimental spaces wwwassemblytics
Buster:(1.0+ds-1) detect and analyze structural variants from a genome assembly wwwastro-tasks
Buster:(2.0) Stretch:(1.0) Debian Astronomy Pure Blend (tasksel tasks) wwwastromatic
Buster & Stretch:(1.1) Astronomical pipeline software collection wwwastrometry-data-2mass
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader wwwastrometry-data-2mass-00
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (2'-2.8') wwwastrometry-data-2mass-01
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (2.8'-4') wwwastrometry-data-2mass-02
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (4'-5.6') wwwastrometry-data-2mass-03
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (5.6'-8') wwwastrometry-data-2mass-04
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (8'-11') wwwastrometry-data-2mass-05
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (11'-16') wwwastrometry-data-2mass-06
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (16'-22') wwwastrometry-data-2mass-07
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (22'-30') wwwastrometry-data-2mass-08-19
Buster & Stretch:(1.1) Astrometry.net 2MASS index files downloader (30'-2000') wwwastrometry-data-tycho2
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 index files wwwastrometry-data-tycho2-07
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 index files (22'-30') wwwastrometry-data-tycho2-07-bigendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (22'-30') wwwastrometry-data-tycho2-07-littleendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (22'-30') wwwastrometry-data-tycho2-08
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 index files (30'-44') wwwastrometry-data-tycho2-08-bigendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (30'-44') wwwastrometry-data-tycho2-08-littleendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (30'-44') wwwastrometry-data-tycho2-09
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 index files (44'-60') wwwastrometry-data-tycho2-09-bigendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (44'-60') wwwastrometry-data-tycho2-09-littleendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (44'-60') wwwastrometry-data-tycho2-10-19
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 index files (60'-2000') wwwastrometry-data-tycho2-10-19-bigendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 big endian index files (60'-2000') wwwastrometry-data-tycho2-10-19-littleendian
Buster:(2-4) Stretch:(2-3) Astrometry.net Tycho-2 little endian index files (60'-2000') wwwastrometry.net
Buster:(0.76+dfsg-3+b1) Stretch:(0.70+dfsg-1) Astrometry plate solver wwwastronomical-almanac
Buster:(5.6-6) Stretch:(5.6-4) astronomical almanac - calculate planet and star positions wwwastropy-utils
Buster:(3.1.2-2) Stretch:(1.3-8) Command line tools from astropy wwwatac
Buster:(0~20150903+r2013-6+b3) Stretch:(0~20150903+r2013-3+b2) genome assembly-to-assembly comparison wwwaugustus
Buster:(3.3.2+dfsg-2) Stretch:(3.2.3+dfsg-1) gene prediction in eukaryotic genomes wwwaugustus-data
Buster:(3.3.2+dfsg-2) Stretch:(3.2.3+dfsg-1) data files for AUGUSTUS wwwautodock
Buster:(4.2.6-6) Stretch:(4.2.6-3) analysis of ligand binding to protein structure wwwautodock-getdata
Buster:(4.2.6-6) Stretch:(4.2.6-3) instructions for getData to collect compounds wwwautodock-test
Buster:(4.2.6-6) Stretch:(4.2.6-3) test files for AutoDock wwwautodock-vina
Buster:(1.1.2-5) Stretch:(1.1.2-3+b1) docking of small molecules to proteins wwwautodocktools
Buster & Stretch:(1.5.7-2) GUI to help set up, launch and analyze AutoDock dockings wwwautogrid
Buster:(4.2.6-6) Stretch:(4.2.6-3) pre-calculate binding of ligands to their receptor wwwautogrid-test
Buster:(4.2.6-6) Stretch:(4.2.6-3) test files for AutoGrid wwwavce00
Buster:(2.0.0-7) Stretch:(2.0.0-5) Conversion of ESRI Arcinfo Vector Coverage in E00 format wwwavogadro
Buster:(1.2.0-4+b1) Stretch:(1.2.0-1+deb9u1) Molecular Graphics and Modelling System wwwavogadro-data
Buster:(1.2.0-4) Stretch:(1.2.0-1+deb9u1) Molecular Graphics and Modelling System (Data Files) wwwaweather
Buster:(0.8.1-1.1+b1) Stretch:(0.8.1-1.1) Advanced Weather Monitoring Program wwwaxe-demultiplexer
Buster:(0.3.3+dfsg-1) Stretch:(0.3.2+dfsg1-1) Trie-based DNA sequencing read demultiplexer www- Back to top
B
baitfisher
Buster:(1.2.7+git20180107.e92dbf2+dfsg-1) software package for designing hybrid enrichment probes wwwbali-phy
Buster:(3.4+dfsg-1) Bayesian Inference of Alignment and Phylogeny wwwbamtools
Buster:(2.5.1+dfsg-3) Stretch:(2.4.1+dfsg-1) toolkit for manipulating BAM (genome alignment) files wwwbandage
Buster:(0.8.1-1) Bioinformatics Application for Navigating De novo Assembly Graphs Easily wwwbarrnap
Buster:(0.9+dfsg-1) Stretch:(0.7+dfsg-2) rapid ribosomal RNA prediction wwwbart
Buster:(0.4.04-2) Stretch:(0.4.00-1) tools for computational magnetic resonance imaging wwwbart-view
Buster:(0.1.00-2) viewer for multi-dimensional complex-valued data wwwbauble
Buster & Stretch:(0.9.7-2.1) biodiversity collection manager software application wwwbcbio
Buster:(1.1.2-3) toolkit for analysing high-throughput sequencing data wwwbcbio-doc
Buster:(1.1.2-3) Documentation for RNAseq-workflows of bcbio(-nextgen) wwwbcftools
Buster:(1.9-1) Stretch:(1.3.1-1) genomic variant calling and manipulation of VCF/BCF files wwwbeads
Buster:(1.1.18+dfsg-3) 2-DE electrophoresis gel image spot detection wwwbeagle
Buster:(5.0-180928+dfsg-1+deb10u1) Stretch:(4.1~160727-86a+dfsg-1) Genotype calling, genotype phasing and imputation of ungenotyped markers wwwbeast-mcmc
Buster:(1.10.4+dfsg-1) Stretch:(1.8.4+dfsg.1-1) Bayesian MCMC phylogenetic inference wwwbeast2-mcmc
Buster:(2.5.1+dfsg-2) Stretch:(2.4.4+dfsg-1) Bayesian MCMC phylogenetic inference wwwbedops
Buster:(2.4.35+dfsg-1) high-performance genomic feature operations wwwbedtools
Buster:(2.27.1+dfsg-4) Stretch:(2.26.0+dfsg-3) suite of utilities for comparing genomic features wwwbedtools-test
Buster:(2.27.1+dfsg-4) Stretch:(2.26.0+dfsg-3) test data for the bedtools package wwwbelvu
Buster:(4.44.1+dfsg-3) multiple sequence alignment viewer and phylogenetic tool wwwberkeley-express
Buster:(1.5.2+dfsg-1+b1) Stretch:(1.5.1-3) Streaming quantification for high-throughput sequencing wwwbibus
Buster:(1.5.2+dfsg-1) Stretch:(1.5.2-4) bibliographic database wwwbio-eagle-examples
Buster:(2.4.1-1) Stretch:(2.3-3) Examples for bio-eagle wwwbio-rainbow
Buster:(2.0.4+dfsg-1) Stretch:(2.0.4-1) clustering and assembling short reads for bioinformatics wwwbiogenesis
Buster:(0.8-3) Stretch:(0.8-2) artificial life program that simulates evolution of organisms wwwbiomaj
Buster:(1.2.3-12) Stretch:(1.2.3-11) biological data-bank updater wwwbiomaj-properties
Buster:(1.2.3-12) Stretch:(1.2.3-11) biological data-bank updater - example properties files wwwbiomaj-watcher
Buster:(1.2.2-5) Stretch:(1.2.2-4+deb9u1) biological data-bank updater - web interface wwwbioperl
Buster:(1.7.2-3) Stretch:(1.7.1-2) Perl tools for computational molecular biology wwwbioperl-run
Buster:(1.7.2-4) Stretch:(1.7.1-3) BioPerl wrappers: scripts wwwbiosig-tools
Buster:(1.9.3-2) Stretch:(1.3.0-2.2) format conversion tools for biomedical data formats wwwbiosquid
Buster:(1.9g+cvs20050121-11) Stretch:(1.9g+cvs20050121-7) utilities for biological sequence analysis wwwbiosyntax
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (metapackage) wwwbiosyntax-common
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (common files) wwwbiosyntax-example
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (example) wwwbiosyntax-gedit
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (gedit) wwwbiosyntax-less
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (less) wwwbiosyntax-vim
Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (vim) wwwbist
Buster:(0.5.2-1.1+b2) Stretch:(0.5.2-1.1) chemical drawing tool wwwbitseq
Buster:(0.7.5+dfsg-4) Bayesian Inference of Transcripts from Sequencing Data wwwbkchem
Buster:(0.13.0-6) Stretch:(0.13.0-5) Chemical structures editor wwwblasr
Buster:(5.3.2+dfsg-1.1) Stretch:(5.3+0-1) mapping single-molecule sequencing reads wwwblast2
Buster:(1:2.8.1-1+deb10u1) Stretch:(1:2.6.0-1) transitional dummy package to ncbi-blast+-legacy wwwblixem
Buster:(4.44.1+dfsg-3) interactive browser of sequence alignments wwwbmt
Buster & Stretch:(0.6-1) software analysis benchmarking toolkit wwwbodr
Buster & Stretch:(10-1) Blue Obelisk Data Repository wwwboinc-app-eah-brp
Buster:(0.20170426+dfsg-2+b7) BOINC extension for Einstein at Home binary pulsar search wwwboinc-app-milkyway
Buster:(0.18d-4+b7) Stretch:(0.18d-4+b4) Milkyway@home application for the BOINC client wwwboinc-app-seti
Buster:(8.00~svn3725-3+rpi1) Stretch:(8.00~svn3363-3+rpi1) SETI@home application for the BOINC client wwwboinc-app-seti-graphics
Buster:(8.00~svn3725-3+rpi1) Stretch:(8.00~svn3363-3+rpi1) SETI@home application for the BOINC client (with graphics) wwwbolt-lmm-example
Buster:(2.3.2+dfsg-3) Examples for bolt-lmm wwwboolector
Buster & Stretch:(1.5.118.6b56be4.121013-1) SMT solver for bit-vectors and arrays wwwbowtie
Buster & Stretch:(1.0.0-5) Ultrafast memory-efficient short read aligner wwwbowtie-examples
Buster & Stretch:(1.0.0-5) Examples for bowtie, the ultrafast memory-efficient short read aligner wwwbowtie2-examples
Buster:(2.3.4.3-1) Stretch:(2.3.0-2) Examples for bowtie2 wwwboxshade
Buster:(3.3.1-12) Stretch:(3.3.1-10) Pretty-printing of multiple sequence alignments wwwbppphyview
Buster:(0.6.1-1) Stretch:(0.3.0-1.1) Bio++ Phylogenetic Viewer wwwbppsuite
Buster:(2.4.1-1) Stretch:(2.2.0-0.1) Bio++ program suite wwwbppsuite-examples
Buster:(2.4.1-1) Examples for Bio++ program suite wwwbrig
Buster:(0.95+dfsg-2) Stretch:(0.95+dfsg-1) BLAST Ring Image Generator wwwbwa
Buster & Stretch:(0.6.2-1) Burrows-Wheeler Aligner www- Back to top
C
cafeobj
Buster:(1.5.9-1) Stretch:(1.5.5-1) new generation algebraic specification and programming language wwwcafeobj-mode
Buster:(1.5.9-1) Stretch:(1.5.5-1) Emacs major mode for editing CafeOBJ source code wwwcaffe-tools-cpu
Buster:(1.0.0+git20180821.99bd997-2+b1) Stretch:(1.0.0~rc4-1) Tools for fast, open framework for Deep Learning (CPU_ONLY) wwwcain
Buster:(1.10+dfsg-3) Stretch:(1.10+dfsg-2) simulations of chemical reactions wwwcain-examples
Buster:(1.10+dfsg-3) Stretch:(1.10+dfsg-2) examples for cain wwwcain-solvers
Buster:(1.10+dfsg-3) Stretch:(1.10+dfsg-2) solvers for cain wwwcalculix-ccx
Buster & Stretch:(2.11-1) Three-Dimensional Structural Finite Element Program wwwcalculix-cgx
Buster & Stretch:(2.11+dfsg-1) Calculix cgx is a 3-dimensional pre- and post-processor for fem wwwcasacore-data-igrf
Buster:(12-1) Stretch:(10-1) International Geomagnetic Reference Field data for casacore wwwcasacore-data-jpl-de200
Buster:(2007.07.05+ds.1-0+deb10u1) Jet Propulsion Laboratory Development Ephemeris DE200 for casacore wwwcasacore-data-jpl-de405
Buster:(2007.07.05+ds.1-0+deb10u1) Jet Propulsion Laboratory Development Ephemeris DE405 for casacore wwwcasacore-data-lines
Buster & Stretch:(0+git2016.11.26-2) Table of spectral line frequencies for casacore wwwcasacore-data-observatories
Buster:(0+git2018.12.08-1) Stretch:(0+git2016.11.02-1) Table of radio observatory coordinates for casacore wwwcasacore-data-sources
Buster & Stretch:(2-2) Table of ICRF reference source coordinates for casacore wwwcasacore-data-tai-utc
Buster:(1.2) Stretch:(1.1) Difference table between TAI and UTC for casacorecasacore-tools
Buster:(3.0.0-4) Stretch:(2.2.0-2) Tools built with CASA wwwcassbeam
Buster & Stretch:(1.1-1) Cassegrain antenna modelling wwwcassiopee
Buster:(1.0.9-2) Stretch:(1.0.5-1) index and search tool in genomic sequences wwwcba
Buster & Stretch:(0.3.6-4.1+b1) Continuous Beam Analysis wwwcbflib-bin
Buster:(0.9.5.18+dfsg1-1+b1) Stretch:(0.9.2.2-1) utilities to manipulate CBF files wwwcbmc
Buster:(5.10-5) Stretch:(5.6-1) bounded model checker for C and C++ programs wwwcclib
Buster:(1.6-1) Stretch:(1.3.1-1) Parsers and algorithms for computational chemistry wwwcclib-data
Buster & Stretch:(1.1-1) Parsers and algorithms for computational chemistry (data files) wwwcct
Buster:(20170919+dfsg-1) visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences wwwcct-examples
Buster:(20170919+dfsg-1) example data for testing the package cct wwwcd-hit
Buster:(4.6.8-2) Stretch:(4.6.6-2) suite of programs designed to quickly group sequences wwwcdbfasta
Buster:(0.99-20100722-5) Stretch:(0.99-20100722-3) Constant DataBase indexing and retrieval tools for multi-FASTA files wwwcelestia-common-nonfree
Buster & Stretch:(1.6.1-1) Non-free datafiles for Celestia, a real-time visual space simulation wwwcernlib
Buster:(20061220+dfsg3-4.4) Stretch:(20061220+dfsg3-4.3+deb9u2) CERNLIB data analysis suite - general use metapackage wwwcernlib-core
Buster:(20061220+dfsg3-4.4) Stretch:(20061220+dfsg3-4.3+deb9u2) CERNLIB data analysis suite - main libraries and programs wwwcernlib-extras
Buster:(20061220+dfsg3-4.4) Stretch:(20061220+dfsg3-4.3+deb9u2) CERNLIB data analysis suite - extra programs wwwcernlib-montecarlo
Buster & Stretch:(20061220+dfsg3-3.1) CERNLIB Monte Carlo libraries wwwcg3
Buster:(1.1.7-1+b1) Stretch:(0.9.9~r11624-1+b1) Tools for using the 3rd edition of Constraint Grammar (CG-3) wwwcgns-convert
Buster:(3.3.0-7~deb10u1) Stretch:(3.3.0-4) CFD General Notation System - Conversion tools wwwcgview
Buster:(0.0.20100111-4) Stretch:(0.0.20100111-2) Circular Genome Viewer wwwch5m3d
Buster:(1.2.5+dfsg-2) Stretch:(1.2.5+dfsg-1) create and visualize 3-dimensional drawings of simple molecules wwwchangeo
Buster:(0.4.5-1) Repertoire clonal assignment toolkit (Python 3) wwwcheckit-tiff
Buster:(0.2.3-2) conformance checker for baseline TIFFs wwwchemical-structures
Buster:(2.2.dfsg.0-13) Stretch:(2.2.dfsg.0-12) set of molecular structures in open formatschemps2
Buster:(1.8.9-1+b1) Stretch:(1.8.3-2) Executable to call libchemps2-3 from the command line wwwchemtool
Buster:(1.6.14-3+b4) Stretch:(1.6.14-1) chemical structures drawing program wwwchimeraslayer
Buster:(20101212+dfsg1-2) Stretch:(20101212+dfsg1-1) detects likely chimeras in PCR amplified DNA wwwchoreonoid
Buster & Stretch:(1.1.0+dfsg-6.2+b1) Integrated robotics GUI environment wwwchoreonoid-data
Buster & Stretch:(1.1.0+dfsg-6.2) Integrated robotics GUI environment - shared data wwwchoreonoid-plugins-base
Buster & Stretch:(1.1.0+dfsg-6.2+b1) Integrated robotics GUI environment - core plug-ins wwwchromhmm
Buster:(1.18+dfsg-1) Chromatin state discovery and characterization wwwchromimpute
Buster:(1.0.3+dfsg-1) Large-scale systematic epigenome imputation wwwcircos
Buster:(0.69.6+dfsg-2) Stretch:(0.69.4+dfsg-1) plotter for visualizing data wwwcircos-tools
Buster:(0.23-1) Stretch:(0.22-1) plotter for visualizing data - helper utilities wwwckon
Buster:(0.7.1-3+b4) Stretch:(0.7.1-3+b2) automatic build tool for ROOT data analysis software wwwclearcut
Buster:(1.0.9-3) Stretch:(1.0.9-1) extremely efficient phylogenetic tree reconstruction wwwclinica
Buster & Stretch:(0.3.0-1) Simple medical records manager wwwclinica-common
Buster & Stretch:(0.3.0-1) Simple medical records manager (architecture independent files) wwwclinica-dev
Buster & Stretch:(0.3.0-1) Simple medical records manager (development files) wwwclinica-plugins
Buster & Stretch:(0.3.0-1) Simple medical records manager (plugins) wwwclonalframe
Buster:(1.2-9) Stretch:(1.2-5) inference of bacterial microevolution using multilocus sequence data wwwclonalframeml
Buster:(1.11-3) Efficient Inference of Recombination in Whole Bacterial Genomes wwwclonalorigin
Buster:(1.0-3) inference of homologous recombination in bacteria using whole genome sequences wwwclustalo
Buster:(1.2.4-2) Stretch:(1.2.4-1) General purpose multiple sequence alignment program for proteins wwwclustalw
Buster:(2.1+lgpl-6) Stretch:(2.1+lgpl-5) global multiple nucleotide or peptide sequence alignment wwwclustalx
Buster:(2.1+lgpl-8) Stretch:(2.1+lgpl-5) Multiple alignment of nucleic acid and protein sequences (graphical interface) wwwcmor-tables
Buster:(3.3-1) Stretch:(3.2-1) MIP tables for the Climate Model Output Rewriter library wwwcmtk
Buster:(3.3.1p1+dfsg-1) Stretch:(3.3.1-1.1) Computational Morphometry Toolkit wwwcod-tools
Buster:(2.3+dfsg-3) tools for manipulating CIF format files wwwcode-aster-gui
Buster:(1.13.1-2.1) Stretch:(1.13.1-2) Graphical user interface for Code_Aster - client wwwcode-aster-run
Buster:(1.13.1-2.1) Stretch:(1.13.1-2) Graphical user interface for Code_Aster - server wwwcode-saturne
Buster:(5.3.2+repack-1) Stretch:(4.3.3+repack-1) General purpose Computational Fluid Dynamics (CFD) software wwwcode-saturne-bin
Buster:(5.3.2+repack-1) Stretch:(4.3.3+repack-1) General purpose Computational Fluid Dynamics (CFD) software - binaries wwwcode-saturne-data
Buster:(5.3.2+repack-1) Stretch:(4.3.3+repack-1) General purpose Computational Fluid Dynamics (CFD) software - data wwwcode-saturne-doc
Buster:(5.3.2+repack-1) Stretch:(4.3.3+repack-1) General purpose Computational Fluid Dynamics (CFD) software - Documentation wwwcode-saturne-include
Buster:(5.3.2+repack-1) Stretch:(4.3.3+repack-1) General purpose Computational Fluid Dynamics (CFD) software - includes wwwcodonw
Buster:(1.4.4-4) Stretch:(1.4.4-3) Correspondence Analysis of Codon Usage wwwcoinor-cbc
Buster:(2.9.9+repack1-1) Stretch:(2.8.12-1+b1) Coin-or branch-and-cut mixed integer programming solver wwwcoinor-clp
Buster:(1.16.11+repack1-1) Stretch:(1.15.10-3) Coin-or linear programming solver wwwcoinor-csdp
Buster & Stretch:(6.1.1-1+b1) A software package for semidefinite programming wwwcoinor-libcbc3
Buster:(2.9.9+repack1-1) Stretch:(2.8.12-1+b1) Coin-or branch-and-cut mixed integer programming solver (shared libraries) wwwcoinor-libcgl1
Buster:(0.59.10+repack1-1) Stretch:(0.58.9-1+b1) COIN-OR Cut Generation Library wwwcoinor-libclp1
Buster:(1.16.11+repack1-1) Stretch:(1.15.10-3) Coin-or linear programming solver (shared libraries) wwwcoinor-libcoinutils3v5
Buster:(2.10.14+repack1-1) Stretch:(2.9.15-4) Coin-or collection of utility classes (binaries and libraries) wwwcoinor-libdylp0
Buster & Stretch:(1.6.0-1.1) Linear programming solver using the dynamic simplex algorithm wwwcoinor-libflopc++0
Buster & Stretch:(1.0.6-3.1+b2) Formulation of Linear Optimization Problems in C++ wwwcoinor-libosi1v5
Buster:(0.107.9+repack1-1) Stretch:(0.106.9-2) COIN-OR Open Solver Interface wwwcoinor-libsymphony3
Buster:(5.6.16+repack1-1.1) Stretch:(5.6.1-1+b1) COIN-OR solver for mixed-integer linear programs (shared libraries) wwwcoinor-libvol0
Buster & Stretch:(1.1.7-1) Coin-or linear programming solver wwwcoinor-symphony
Buster:(5.6.16+repack1-1.1) Stretch:(5.6.1-1+b1) COIN-OR solver for mixed-integer linear programs wwwcomet-ms
Buster:(2018012-1) Stretch:(2014022-3+b2) Tandem mass spectrometry (MS/MS) search engine wwwconcavity
Buster:(0.1+dfsg.1-4) Stretch:(0.1+dfsg.1-1) predictor of protein ligand binding sites from structure and conservation wwwconnectome-workbench
Buster:(1.3.2-1) Stretch:(1.2.3+git3-g7b83782-1) brain visualization, analysis and discovery tool wwwconservation-code
Buster:(20110309.0-7) Stretch:(20110309.0-5) protein sequence conservation scoring tool wwwcp2k
Buster:(6.1-2) Stretch:(4.1-1) Ab Initio Molecular Dynamics wwwcp2k-data
Buster:(6.1-2) Stretch:(4.1-1) Ab Initio Molecular Dynamics (data files) wwwcpl-plugin-amber
Buster:(4.3.8+dfsg-1+b1) Stretch:(4.3.4+dfsg-1+b1) ESO data reduction pipeline for the AMBER instrument wwwcpl-plugin-amber-calib
Buster:(4.3.8+dfsg-1) Stretch:(4.3.4+dfsg-1) ESO data reduction pipeline calibration data downloader for AMBER wwwcpl-plugin-fors
Buster:(5.3.32+dfsg-1) Stretch:(5.3.11+dfsg-1) ESO data reduction pipeline for the FORS1/2 instruments wwwcpl-plugin-fors-calib
Buster:(5.3.32+dfsg-1) Stretch:(5.3.11+dfsg-1) ESO data reduction pipeline calibration data downloader for FORS2 wwwcpl-plugin-giraf
Buster:(2.16.3+dfsg-1+b1) Stretch:(2.15+dfsg-1+b1) ESO data reduction pipeline for the GIRAFFE instrument wwwcpl-plugin-giraf-calib
Buster:(2.16.3+dfsg-1) Stretch:(2.15+dfsg-1) ESO data reduction pipeline calibration data downloader for GIRAFFE wwwcpl-plugin-hawki
Buster:(2.4.3+dfsg-1) Stretch:(1.8.21+dfsg-1) ESO data reduction pipeline for the HAWK-I instrument wwwcpl-plugin-hawki-calib
Buster:(2.4.3+dfsg-1) Stretch:(1.8.21+dfsg-1) ESO data reduction pipeline calibration data downloader for HAWK-I wwwcpl-plugin-kmos
Buster:(2.1.0+dfsg-1) Stretch:(1.4.0+dfsg-1) ESO data reduction pipeline for the KMOS instrument wwwcpl-plugin-kmos-calib
Buster:(2.1.0+dfsg-1) Stretch:(1.4.0+dfsg-1) ESO data reduction pipeline calibration data downloader for KMOS wwwcpl-plugin-muse
Buster:(2.6+dfsg-1) Stretch:(1.6.2+dfsg-1) ESO data reduction pipeline for the MUSE instrument wwwcpl-plugin-muse-calib
Buster:(2.6+dfsg-1) Stretch:(1.6.2+dfsg-1) ESO data reduction pipeline calibration data downloader for MUSE wwwcpl-plugin-naco
Buster:(4.4.6+dfsg-1) Stretch:(4.4.1+dfsg-3) ESO data reduction pipeline for the NaCo instrument wwwcpl-plugin-naco-calib
Buster:(4.4.6+dfsg-1) Stretch:(4.4.1+dfsg-3) ESO data reduction pipeline NaCo calibration data downloader wwwcpl-plugin-uves
Buster:(5.9.1+dfsg-1+b1) Stretch:(5.7.0+dfsg-1+b1) ESO data reduction pipeline for the UVES instrument wwwcpl-plugin-uves-calib
Buster:(5.9.1+dfsg-1) Stretch:(5.7.0+dfsg-1) ESO data reduction pipeline calibration data downloader for UVES wwwcpl-plugin-vimos
Buster:(3.2.3+dfsg-2+b1) Stretch:(3.1.7+dfsg-1+b1) ESO data reduction pipeline for the VIMOS instrument wwwcpl-plugin-vimos-calib
Buster:(3.2.3+dfsg-2) Stretch:(3.1.7+dfsg-1) ESO data reduction pipeline calibration data downloader for VIMOS wwwcpl-plugin-visir
Buster:(4.3.7+dfsg-1+b1) Stretch:(4.3.0+dfsg1-1+b1) ESO data reduction pipeline for the VISIR instrument wwwcpl-plugin-visir-calib
Buster:(4.3.7+dfsg-1) Stretch:(4.3.0+dfsg1-1) ESO data reduction pipeline calibration data downloader for VISIR wwwcpl-plugin-xshoo
Buster:(3.2.0+dfsg-1+b1) Stretch:(2.8.4+dfsg-3) ESO data reduction pipeline for the XSHOOTER instrument wwwcpl-plugin-xshoo-calib
Buster:(3.2.0+dfsg-1) Stretch:(2.8.4+dfsg-3) ESO data reduction pipeline calibration data downloader for XSHOOTER wwwcpuinfo
Buster:(0.0~git20190201.d5e37ad-1) CPU INFOrmation library (binary utilities) wwwcritterding
Buster & Stretch:(1.0-beta12.1-1.3) Evolving Artificial Life wwwctdconverter
Buster:(2.0-4) Convert CTD files into Galaxy tool and CWL CommandLineTool files wwwctsim
Buster:(6.0.2-2) Stretch:(5.2.0-4) Computed tomography simulator wwwctsim-help
Buster:(6.0.2-2) Stretch:(5.2.0-4) Online help file for CTSim wwwcutadapt
Buster:(1.18-1) Stretch:(1.12-2) Clean biological sequences from high-throughput sequencing reads wwwcwltool
Buster:(1.0.20181217162649+dfsg-10) Stretch:(1.0.20170114120503-1) Common Workflow Language reference implementation www- Back to top
D
daligner
Buster:(1.0+git20180524.fd21879-1) Stretch:(1.0+20161119-1) local alignment discovery between long nucleotide sequencing reads wwwdans-gdal-scripts
Buster:(0.24-3+b1) Stretch:(0.24-1+b1) GDAL contributed tools by Geographic Information Network of Alaska wwwdarknet
Buster:(0.0.0+git20180914.61c9d02e-1) Open Source Neural Networks in C wwwdascrubber
Buster:(1.1-1) Stretch:(0~20160601-2) alignment-based scrubbing pipeline for DNA sequencing reads wwwdatalad
Buster:(0.11.2-2) Stretch:(0.4.1-1) data files management and distribution platform wwwdatalad-container
Buster:(0.2.2-2) DataLad extension for working with containerized environments wwwdawg
Buster:(1.2-2) Stretch:(1.2-1) simulate the evolution of recombinant DNA sequences wwwdazzdb
Buster:(1.0+git20180908.0bd5e07-1) Stretch:(1.0+20161112-2) manage nucleotide sequencing read data wwwdcl-f77
Buster:(7.3.3-1) GFD-DENNOU Club Library (DCL) - FORTRAN77 version wwwdcm2niix
Buster:(1.0.20181125-1) Stretch:(1.0.20161101-1) next generation DICOM to NIfTI converter wwwdcmtk
Buster:(3.6.4-2.1) Stretch:(3.6.1~20160216-4) OFFIS DICOM toolkit command line utilities wwwdebian-astro-logo
Buster:(2.0) Stretch:(1.0) Debian Astronomy Pure Blends Logo wwwdeepnano-data
Buster:(0.0+git20170813.e8a621e-3) alternative basecaller for MinION reads of genomic sequences (data) wwwdelly
Buster:(0.8.1-2) Structural variant discovery by read analysis wwwdh-r
Buster:(20190121) Stretch:(20161219) Debian helper tools for packaging R librariesdialign
Buster:(2.2.1-10) Stretch:(2.2.1-8) Segment-based multiple sequence alignment wwwdialign-tx
Buster:(1.0.2-12) Stretch:(1.0.2-9) Segment-based multiple sequence alignment wwwdialign-tx-data
Buster:(1.0.2-12) Stretch:(1.0.2-9) Segment-based multiple sequence alignment (data files) wwwdiamond-aligner
Buster:(0.9.22+dfsg-2) accelerated BLAST compatible local sequence aligner wwwdicomnifti
Buster:(2.33.1-1) Stretch:(2.32.1-1) converts DICOM files into the NIfTI format wwwdicompyler
Buster:(0.4.2.0-2) Stretch:(0.4.2-3) radiation therapy research platform wwwdimbl
Buster:(0.15-2.1) Stretch:(0.15-1) Distributed Memory Based Learner wwwdindel
Buster:(1.01-wu1-3+dfsg-1) Stretch:(1.01+dfsg-4) determines indel calls from short-read data wwwdiscosnp
Buster:(1.2.6-2) Stretch:(1.2.6-1) discovering Single Nucleotide Polymorphism from raw set(s) of reads wwwdisulfinder
Buster:(1.2.11-8) Stretch:(1.2.11-6) cysteines disulfide bonding state and connectivity predictor wwwdisulfinder-data
Buster:(1.2.11-8) Stretch:(1.2.11-6) data files for predictor of disulfide bonds in proteins wwwdlmodelbox
Buster:(0.1.3-1) Swiss Army Knife of Deep Learning Models wwwdnaclust
Buster:(3-6) Stretch:(3-4) tool for clustering millions of short DNA sequences wwwdotter
Buster:(4.44.1+dfsg-3) detailed comparison of two genomic sequences wwwdotur
Buster & Stretch:(1.53-2) distance based OTU and richness estimation wwwdozzaqueux
Buster:(3.51-2) Stretch:(3.50-1) simulator for chemical mixtures wwwdozzaqueux-data
Buster:(3.51-2) Stretch:(3.50-1) databases for chemical mixtures wwwdpuser
Buster:(3.3+p1+dfsg-2+b1) Stretch:(3.3+p1+dfsg-2) Interactive language for handling numbers, strings, and matrices wwwdrawxtl
Buster:(5.5-3+b2) Stretch:(5.5-3+b1) crystal structure viewer wwwdrslib
Buster:(0.3.1.p3-1) Stretch:(0.3.0a3-5) Command-line tools for the Data Reference Syntax library wwwdsdp
Buster & Stretch:(5.8-9.4) Software for Semidefinite Programming wwwdssp
Buster:(3.0.0-3) Stretch:(2.2.1-3) protein secondary structure assignment based on 3D structure wwwdwgsim
Buster:(0.1.12-2) Stretch:(0.1.11-3) short sequencing read simulator wwwdx
Buster:(1:4.4.4-12) Stretch:(1:4.4.4-9+b1) OpenDX (IBM Visualization Data Explorer) - main package wwwdxf2gcode
Buster:(20170925-4) prepares drawings of parts for automatic machine tools wwwdxsamples
Buster:(4.4.0-4) Stretch:(4.4.0-3) Sample programs for the OpenDX Data Explorer www- Back to top
E
e-mem
Buster:(1.0.1-2) Efficient computation of Maximal Exact Matches for very large genomes wwwe00compr
Buster:(1.0.1-5) Stretch:(1.0.1-3) Program to read/write Arcinfo compressed E00 files wwwea-utils
Buster:(1.1.2+dfsg-5) Stretch:(1.1.2+dfsg-4+b2) command-line tools for processing biological sequencing data wwweasychem
Buster & Stretch:(0.6-8) Draw high-quality molecules and 2D chemical formulas wwwecaccess
Buster & Stretch:(4.0.1-1) clients to access ECMWF facilities wwwecflow-client
Buster:(4.12.0-1) Client tools for Meteorological workflow wwwecflow-server
Buster:(4.12.0-1) Meteorological workflow controller - server wwwecopcr
Buster:(1.0.1+dfsg-1) Stretch:(0.5.0+dfsg-1) estimate PCR barcode primers quality wwwedfbrowser
Buster:(1.67+dfsg-1) Stretch:(1.58-1) viewer for biosignal storage files such as bdf and edf wwwedlib-aligner
Buster:(1.2.4-1) edlib sequence alignment tool using edit distance wwwedtsurf
Buster:(0.2009-6) Stretch:(0.2009-4) triangulated mesh surfaces for protein structures wwweigensoft
Buster:(7.2.1+dfsg-1+b1) Stretch:(6.1.4+dfsg-1) reduction of population bias for genetic analyses wwwelk-lapw
Buster:(5.4.24-2) Stretch:(4.0.15-2) All-Electron Density-Functional Electronic Structure Code wwwelki
Buster:(0.7.1-10.1) Stretch:(0.7.1-3) Data mining algorithm development framework wwwelki-dev
Buster:(0.7.1-10.1) Stretch:(0.7.1-3) Data mining algorithm development framework - development files wwwelph
Buster:(1.0.1-2) DNA/protein sequence motif finder wwwembassy-domainatrix
Buster:(0.1.660-3) Stretch:(0.1.660-1) Extra EMBOSS commands to handle domain classification file wwwembassy-domalign
Buster:(0.1.660-3) Stretch:(0.1.660-1) Extra EMBOSS commands for protein domain alignment wwwembassy-domsearch
Buster:(1:0.1.660-3) Stretch:(1:0.1.660-1) Extra EMBOSS commands to search for protein domains wwwemboss
Buster:(6.6.0+dfsg-7+b1) Stretch:(6.6.0+dfsg-6) European molecular biology open software suite wwwemboss-data
Buster:(6.6.0+dfsg-7) Stretch:(6.6.0+dfsg-6) data files for the EMBOSS package wwwemboss-explorer
Buster:(2.2.0-10) Stretch:(2.2.0-8) web-based GUI to EMBOSS wwwemboss-lib
Buster:(6.6.0+dfsg-7+b1) Stretch:(6.6.0+dfsg-6) EMBOSS Libraries wwwengauge-digitizer
Buster:(10.10+ds.1-1) Stretch:(9.7+ds.1-1) interactively extracts numbers from bitmap graphs or maps wwwent
Buster:(1.2debian-2) Stretch:(1.2debian-1) pseudorandom number sequence test program wwwepigrass
Buster:(2.4.7-2+b31) Stretch:(2.4.7-1+b2) scientific tool for simulations and scenario analysis in network epidemiology wwwepsilon-bin
Buster:(0.9.2+dfsg-4) Stretch:(0.9.2+dfsg-2) Library for wavelet image compression - tools wwwergo
Buster & Stretch:(3.5-1) Quantum chemistry program for large-scale calculations wwweso-midas
Buster:(19.02pl1.0-1) Stretch:(15.09pl1.0-2) European Southern Observatory Munich Image Data Analysis System wwweso-midas-testdata
Buster:(19.02pl1.0-1) Test data files for ESO-MIDAS wwweso-pipelines
Buster & Stretch:(1.2) ESO VLT Instrument pipeline collectionesorex
Buster:(3.13.1-1) Stretch:(3.12.3-1) Execution Tool for European Southern Observatory pipelines wwwestscan
Buster:(3.0.3-3) ORF-independent detector of coding DNA sequences wwwesys-particle
Buster:(2.3.5+dfsg1-2.1) Stretch:(2.3.4+dfsg1-4) Software for particle-based numerical modelling. MPI version. wwwetsf-io
Buster:(1.0.4-4) Stretch:(1.0.4-1.1) Binary tools to check, merge and read ETSF files wwwexonerate
Buster:(2.4.0-4) Stretch:(2.4.0-2) generic tool for pairwise sequence comparison wwwexpeyes
Buster:(4.4.4+dfsg-4) Stretch:(4.2.1+dfsg-1) hardware & software framework for developing science experiments wwwexpeyes-clib
Buster:(4.4.4+dfsg-4) Stretch:(4.2.1+dfsg-1) hardware & software framework for developing science experiments wwweye
Buster:(19.0221.2026~ds-1) semantic web reasoning engine wwweyes17
Buster:(4.4.4+dfsg-4) hardware & software framework for developing science experiments www- Back to top
F
fact++
Buster:(1.6.5~dfsg-2) Stretch:(1.6.5~dfsg-1) description logic reasoner for the semantic web wwwfalconkit
Buster & Stretch:(0.7-1) genome assembly toolkit wwwfast5
Buster:(0.6.5-2) utilities for manipulating Oxford Nanopore Fast5 files wwwfasta3-doc
Buster:(36.3.8g-1) user guide for FASTA tools wwwfastahack
Buster:(0.0+git20160702.bbc645f+dfsg-6) Stretch:(0.0+20160702-1) utility for indexing and sequence extraction from FASTA files wwwfastaq
Buster:(3.17.0-2) Stretch:(3.14.0-1) FASTA and FASTQ file manipulation tools wwwfastdnaml
Buster:(1.2.2-14) Stretch:(1.2.2-11) Tool for construction of phylogenetic trees of DNA sequences wwwfastlink
Buster:(4.1P-fix100+dfsg-2) Stretch:(4.1P-fix100+dfsg-1) faster version of pedigree programs of Linkage wwwfastml
Buster:(3.1-4) Stretch:(3.1-3) maximum likelihood ancestral amino-acid sequence reconstruction wwwfastp
Buster:(0.19.6+dfsg-1) Ultra-fast all-in-one FASTQ preprocessor wwwfastqc
Buster:(0.11.8+dfsg-2) Stretch:(0.11.5+dfsg-6) quality control for high throughput sequence data wwwfastqtl
Buster:(2.184+dfsg-6) Stretch:(2.184+dfsg-5) Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes wwwfasttree
Buster:(2.1.10-2) Stretch:(2.1.9-1) phylogenetic trees from alignments of nucleotide or protein sequences wwwfastx-toolkit
Buster:(0.0.14-6) Stretch:(0.0.14-3) FASTQ/A short nucleotide reads pre-processing tools wwwfcc
Buster & Stretch:(2.8-1) Script to compile C/C++ programs and link to Fortran libraries wwwfeedgnuplot
Buster:(1.51-1) Stretch:(1.40-1) Pipe-oriented frontend to Gnuplot wwwffindex
Buster:(0.9.9.9-2) Stretch:(0.9.9.7-3) simple index/database for huge amounts of small files wwwfigtree
Buster:(1.4.4-3) Stretch:(1.4.2+dfsg-2) graphical phylogenetic tree viewer wwwfilo
Buster & Stretch:(1.1.0-3) FILe and stream Operations wwwfiona
Buster:(1.8.4-1+b1) Stretch:(1.7.1-1) Command line tool for reading/writing vector geospatial data wwwfitgcp
Buster:(0.0.20150429-2) Stretch:(0.0.20150429-1) fitting genome coverage distributions with mixture models wwwfitscut
Buster:(1.4.4-4+b3) Stretch:(1.4.4-4+b2) Extract cutouts from FITS image format files wwwfitsh
Buster & Stretch:(0.9.2-1) Software package for astronomical image processing wwwfitspng
Buster:(1.4-1) Stretch:(0.3.5-1+b1) FITS to PNG converter wwwfitsverify
Buster:(4.19-1+b1) Stretch:(4.18-1+b1) FITS File Format-Verification Tool wwwfityk
Buster:(1.3.1-3) Stretch:(1.3.0-1) general-purpose nonlinear curve fitting and data analysis wwwflexbar
Buster:(1:3.4.0-2) Stretch:(2.50-2) flexible barcode and adapter removal for sequencing platforms wwwflexpart
Buster:(9.02-21) Stretch:(9.02-15) Particle Dispersion model for tracing air transport phenomena wwwflextra
Buster:(5.0-12) Stretch:(5.0-6) Trajectory model for tracing air transport phenomena wwwfoma-bin
Buster:(0.9.18+r243-1+b1) Stretch:(0.9.18+r243-1) Xerox-compatible finite-state compiler - library wwwform
Buster:(4.2.1-1) Symbolic manipulation system wwwfractalnow
Buster:(0.8.2-2) Stretch:(0.8.1-1.1) Fast, advanced fractal generator wwwfree42-nologo
Buster & Stretch:(1.4.77-1.2) Free42 is a re-implementation of the HP-42S calculator wwwfreecad
Buster:(0.18~pre1+dfsg1-5+rpi1) Stretch:(0.16+dfsg2-3) Extensible Open Source CAx program wwwfreecad-common
Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - common files wwwfreecad-python2
Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - Python 2 binaries wwwfreecad-python3
Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - Python 3 binaries wwwfreecad-runtime
Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - runtime files wwwfreecontact
Buster:(1.0.21-7) Stretch:(1.0.21-5) fast protein contact predictor wwwfreediams
Buster:(0.9.4-2+b3) Stretch:(0.9.4-1) pharmaceutical drug prescription and interaction manager wwwfreemedforms-common-resources
Buster:(0.9.4-2) Stretch:(0.9.4-1) common data for the FreeMedForms project applications wwwfreemedforms-emr
Buster:(0.9.4-2+b3) Stretch:(0.9.4-1) electronic medical record manager wwwfreemedforms-emr-resources
Buster:(0.9.4-2) Stretch:(0.9.4-1) data for the FreeMedForms EMR wwwfreemedforms-freedata
Buster:(0.9.4-2) Stretch:(0.9.4-1) free extra-data for the FreeMedForms project wwwfreemedforms-libs
Buster:(0.9.4-2+b3) Stretch:(0.9.4-1) common libs for the FreeMedForms project wwwfreemedforms-project
Buster:(0.9.4-2) Stretch:(0.9.4-1) set of medical applications for health professionals wwwfreemedforms-theme
Buster:(0.9.4-2) Stretch:(0.9.4-1) theme for the FreeMedForms project wwwfrog
Buster:(0.15-1) Stretch:(0.13.7-1) tagger and parser for natural languages (runtime) wwwfrogdata
Buster:(0.16-1) Stretch:(0.13-1) Data files for Frog wwwfsa
Buster:(1.15.9+dfsg-4) Stretch:(1.15.9+dfsg-3) Fast Statistical Alignment of protein, RNA or DNA sequences wwwfsl
Buster:(5.0.8-6) Stretch:(5.0.7-4) transitional dummy package wwwfsl-core
Buster:(5.0.8-6) Stretch:(5.0.7-4) metapackage for the latest version of FSL wwwftools-fv
Buster:(5.5+dfsg-2) Stretch:(5.4+dfsg-2) Tool for viewing and editing FITS format files wwwftools-pow
Buster:(5.5+dfsg-2) Stretch:(5.4+dfsg-2+b1) Curve plotting and image display interface tool wwwfuntools
Buster:(1.4.7-4) Stretch:(1.4.7-1) Minimal buy-in FITS utility package wwwfxt-tools
Buster:(0.3.8-2) Stretch:(0.3.2-2) Multithreaded tracing library www- Back to top
G
g3data
Buster & Stretch:(1:1.5.3-2.1) extract data from scanned graphs wwwgabedit
Buster:(2.4.8-3+b1) Stretch:(2.4.8-3) graphical user interface to Ab Initio packages wwwgalileo
Buster:(0.5.1-6) Stretch:(0.5.1-4) Utility to securely synchronize a Fitbit device with the Fitbit web service wwwgalileo-daemon
Buster:(0.5.1-6) Stretch:(0.5.1-4) Utility to securely synchronize a Fitbit device - daemon wwwgamgi
Buster:(0.17.3-2) Stretch:(0.17.1-1) General Atomistic Modelling Graphic Interface (GAMGI) wwwgamgi-data
Buster:(0.17.3-2) Stretch:(0.17.1-1) General Atomistic Modelling Graphic Interface (data) wwwgarli
Buster:(2.1-3) Stretch:(2.1-1) phylogenetic analysis of molecular sequence data using maximum-likelihood wwwgarli-examples
Buster:(2.1-3) Stretch:(2.1-1) phylogenetic analysis of molecular sequence data (examples) wwwgarli-mpi
Buster:(2.1-3) phylogenetic analysis of molecular sequence data using maximum-likelihood (MPI) wwwgarlic
Buster:(1.6-3) Stretch:(1.6-1.1) visualization program for biomolecules wwwgatb-core-testdata
Buster:(1.4.1+git20181225.44d5a44+dfsg-3) Genome Analysis Toolbox with de-Bruijn graph (test data) wwwgausssum
Buster:(3.0.2-1) Stretch:(3.0.1.1-1) parse and display Gaussian, GAMESS, and etc's output wwwgazebo9-common
Buster:(9.6.0-1) Open Source Robotics Simulator - Shared files wwwgbrowse
Buster:(2.56+dfsg-4) Stretch:(2.56+dfsg-2) GMOD Generic Genome Browser wwwgbrowse-calign
Buster:(2.56+dfsg-4+b1) Stretch:(2.56+dfsg-2) CAlign helper wwwgbrowse-data
Buster:(2.56+dfsg-4) Stretch:(2.56+dfsg-2) Sample data to use GBrowse wwwgbutils
Buster:(5.7.1-1) Stretch:(5.6.8-1) utilities for command line econometrics wwwgchempaint
Buster:(0.14.17-1.1) Stretch:(0.14.15-1+deb9u1) 2D chemical structures editor for the GNOME2 desktop wwwgcrystal
Buster:(0.14.17-1.1) Stretch:(0.14.15-1+deb9u1) lightweight crystal structures visualizer wwwgcu-bin
Buster:(0.14.17-1.1) Stretch:(0.14.15-1+deb9u1) GNOME chemistry utils (helper applications) wwwgcx
Buster & Stretch:(1.3-1.1) astronomical image processing and photometry gtk+ application wwwgdal-bin
Buster:(2.4.0+dfsg-1+b2) Stretch:(2.1.2+dfsg-5) Geospatial Data Abstraction Library - Utility programs wwwgdal-data
Buster:(2.4.0+dfsg-1) Geospatial Data Abstraction Library - Data files wwwgdis
Buster & Stretch:(0.90-5) molecular and crystal model viewer wwwgdis-data
Buster & Stretch:(0.90-5) molecular and crystal model viewer (data files) wwwgdl-astrolib
Buster:(2018.08.10+dfsg-1) Stretch:(2016.11.10+dfsg-1) Low-level astronomy software for GDL wwwgdl-coyote
Buster:(2019.01.29-1) Stretch:(2016.11.13-1) GDL library from D. Fannings IDL courses wwwgdl-mpfit
Buster:(1.85+2017.01.03-3) Stretch:(1.84+2016.05.19-1) Robust non-linear least squares curve fitting for GDL wwwgdpc
Buster:(2.2.5-9) Stretch:(2.2.5-6) visualiser of molecular dynamic simulations wwwgdpc-examples
Buster:(2.2.5-9) Stretch:(2.2.5-6) example files for the gdpc program wwwgeant321
Buster & Stretch:(1:3.21.14.dfsg-11) [Physics] Particle detector description and simulation tool wwwgeant321-data
Buster & Stretch:(1:3.21.14.dfsg-11) [Physics] Data for GEANT 3.21 detector simulator wwwgelemental
Buster:(1.2.0-12) Stretch:(1.2.0-10) Periodic Table viewer wwwgemma
Buster:(0.98.1+dfsg-1) Genome-wide Efficient Mixed Model Association wwwgemma-doc
Buster:(0.98.1+dfsg-1) Example folder for GEMMA wwwgenometester
Buster:(4.0+git20180508.a9c14a6+dfsg-1) toolkit for performing set operations on k-mer lists wwwgenometools
Buster:(1.5.10+ds-3) Stretch:(1.5.9+ds-4) versatile genome analysis toolkit wwwgenometools-common
Buster:(1.5.10+ds-3) Stretch:(1.5.9+ds-4) shared data files for GenomeTools wwwgentle
Buster:(1.9+cvs20100605+dfsg1-7+b1) Stretch:(1.9+cvs20100605+dfsg1-5) suite to plan genetic cloning wwwgeographiclib-tools
Buster:(1.49-4) Stretch:(1.46-2+b2) C++ library to solve some geodesic problems -- tools wwwgeotiff-bin
Buster:(1.4.3-1) Stretch:(1.4.2-2+b1) GeoTIFF (geografic enabled TIFF) library -- tools wwwgerris
Buster:(20131206+dfsg-18+b27) Stretch:(20131206+dfsg-17) Fluid Flow Solver wwwgetdata
Buster:(0.2-3) Stretch:(0.2-1) management of external databases wwwgff2aplot
Buster:(2.0-11) Stretch:(2.0-8) pair-wise alignment-plots for genomic sequences in PostScript wwwgff2ps
Buster:(0.98l-2) Stretch:(0.98d-5) produces PostScript graphical output from GFF-files wwwgfsview
Buster:(20121130+dfsg-6) Stretch:(20121130+dfsg-4) graphical viewer for Gerris simulation files wwwgfsview-batch
Buster:(20121130+dfsg-6) Stretch:(20121130+dfsg-4) batch-version of viewer for Gerris simulation files wwwghkl
Buster:(5.0.0.2456-1) Stretch:(5.0.0.2173-2) diffractometer computation control application wwwghmm
Buster:(0.9~rc3-2) General Hidden-Markov-Model library - tools wwwgiella-core
Buster:(0.1.1~r129227+svn121148-2) Stretch:(0.1.1~r129227+svn121148-1) GTCORE files for building Giellatekno language packages wwwgiella-sme
Buster:(0.0.20150917~r121176-3) Stretch:(0.0.20150917~r121176-1) Giellatekno single language data for North Saami wwwgiella-sme-dev
Buster:(0.0.20150917~r121176-3) Stretch:(0.0.20150917~r121176-1) Giellatekno single language data for North Saami (dev extras) wwwginga
Buster:(2.7.2-2) Stretch:(2.6.1-2) Astronomical image viewer wwwglam2
Buster:(1064-5) Stretch:(1064-3) gapped protein motifs from unaligned sequences wwwgliese
Buster & Stretch:(3.0.95-2) stellar data set from the Third Catalogue of Nearby Stars wwwglueviz
Buster:(0.14.1+dfsg-1) Stretch:(0.9.1+dfsg-1) Linked data visualization wwwgmt
Buster:(5.4.5+dfsg-2) Stretch:(5.3.1+dfsg-2+b1) Generic Mapping Tools wwwgmt-common
Buster:(5.4.5+dfsg-2) Stretch:(5.3.1+dfsg-2) Generic Mapping Tools - Architecture-independent files wwwgmt-dcw
Buster:(1.1.4-2) Stretch:(1.1.2-2) Digital Chart of the World (DCW) for GMT wwwgmt-gshhg
Buster:(2.3.7-4) Stretch:(2.3.6-2) Global Self-consistent Hierarchical High-resolution Geography (GSHHG) wwwgmt-gshhg-full
Buster:(2.3.7-4) Stretch:(2.3.6-2) Full resolution coastlines for the Generic Mapping Tools wwwgmt-gshhg-high
Buster:(2.3.7-4) Stretch:(2.3.6-2) High resolution coastlines for the Generic Mapping Tools wwwgmt-gshhg-low
Buster:(2.3.7-4) Stretch:(2.3.6-2) Low resolution coastlines for the Generic Mapping Tools wwwgnuastro
Buster:(0.8-1) Stretch:(0.2.33-1) GNU Astronomy Utilities programs wwwgpaw
Buster:(1.5.1-1) Stretch:(1.1.0-1+b1) DFT and beyond within the projector-augmented wave method wwwgpaw-data
Buster:(0.9.20000-2) Stretch:(0.9.20000-1) gpaw datasets/setups wwwgperiodic
Buster:(3.0.3-1) Stretch:(2.0.10-7) periodic table application wwwgpx
Buster:(2.5.2-3) Stretch:(2.5.2-1) Gcode to x3g conversion post processor wwwgpx2shp
Buster:(0.71.0-7) Stretch:(0.71.0-4+b1) convert GPS or GPX file to ESRI Shape file wwwgr-fcdproplus
Buster:(3.7.25.4b6464b-5+b2) Stretch:(3.7.25.4b6464b-2) Funcube Dongle Pro Plus controller for GNU Radio wwwgrabix
Buster:(0.1.7-1) wee tool for random access into BGZF files wwwgraphlan
Buster:(1.1.3-1) Stretch:(1.1-2) circular representations of taxonomic and phylogenetic trees wwwgrass
Buster:(7.6.0-1) Stretch:(7.2.0-2) Geographic Resources Analysis Support System (GRASS GIS) wwwgrass-core
Buster:(7.6.0-1+b1) Stretch:(7.2.0-2) GRASS GIS core components wwwgrass-gui
Buster:(7.6.0-1+b1) Stretch:(7.2.0-2) GRASS GIS graphical user interfaces wwwgravit
Buster:(0.5.1+dfsg-3) Stretch:(0.5.1+dfsg-2) visually stunning gravity simulator wwwgravit-data
Buster:(0.5.1+dfsg-3) Stretch:(0.5.1+dfsg-2) data files for Gravit wwwgri
Buster:(2.12.26-1+b1) Stretch:(2.12.23-10) a language for scientific illustration wwwgrinder
Buster:(0.5.4-5) Stretch:(0.5.4-1) Versatile omics shotgun and amplicon sequencing read simulator wwwgromacs
Buster:(2019.1-1) Stretch:(2016.1-2) Molecular dynamics simulator, with building and analysis tools wwwgromacs-data
Buster:(2019.1-1) Stretch:(2016.1-2) GROMACS molecular dynamics sim, data and documentation wwwgromacs-mpich
Buster:(2019.1-1) Stretch:(2016.1-2) Molecular dynamics sim, binaries for MPICH parallelization wwwgromacs-openmpi
Buster:(2019.1-1) Stretch:(2016.1-2) Molecular dynamics sim, binaries for OpenMPI parallelization wwwgvb
Buster & Stretch:(1.4-1) visual simulator of 1 and 2-dimensional vibrations wwwgwama
Buster:(2.2.2+dfsg-2) Stretch:(2.2.2+dfsg-1) Genome-Wide Association Meta Analysis wwwgwyddion
Buster:(2.52-1) Stretch:(2.47-1) Scanning Probe Microscopy visualization and analysis tool wwwgwyddion-common
Buster:(2.52-1) Stretch:(2.47-1) architecture-independent files for Gwyddion SPM analysis tool wwwgwyddion-plugins
Buster:(2.52-1) Stretch:(2.47-1) plugins for Gwyddion SPM analysis tool wwwgyoto
Buster:(1.3.1-1) Stretch:(1.2.0-2) General relativistic geodesic integration and ray-tracing wwwgyoto-bin
Buster:(1.3.1-1) Stretch:(1.2.0-2) General relativistic ray-tracing command-line interface www- Back to top
H
h5utils
Buster:(1.13.1-3+b1) Stretch:(1.12.1-6+b1) HDF5 files visualization tools wwwharminv
Buster:(1.4.1-2) Stretch:(1.4-1) extraction of complex frequencies and amplitudes from time series wwwharvest-tools
Buster:(1.3-4) Stretch:(1.3-1) archiving and postprocessing for reference-compressed genomic multi-alignments wwwhdf-compass
Buster & Stretch:(0.6.0-1) viewer for HDF5 and related formats wwwhdf5-helpers
Buster:(1.10.4+repack-10) Stretch:(1.10.0-patch1+docs-3+deb9u1) Hierarchical Data Format 5 (HDF5) - Helper tools wwwhdf5-tools
Buster:(1.10.4+repack-10) Stretch:(1.10.0-patch1+docs-3+deb9u1) Hierarchical Data Format 5 (HDF5) - Runtime tools wwwherisvm
Buster:(0.8.2-1) Stretch:(0.7.0-1) machine learning tools for classification algorithms wwwhfst
Buster:(3.15.0-1.1~deb10u1) Stretch:(3.10.0~r2798-3) Helsinki Finite-State Transducer Technology wwwhfst-ospell
Buster:(0.5.0-2) Stretch:(0.4.0~r4643-4+b1) Spell checker library and tool based on HFST wwwhhsuite-data
Buster:(3.0~beta3+dfsg-3) Stretch:(3.0~beta2+dfsg-3) sensitive protein sequence searching based on HMM-HMM alignment (data) wwwhidrd
Buster & Stretch:(0.2.0-11) tools for parsing and generating HID report descriptors wwwhilive
Buster:(1.1-2) Stretch:(0.3-2) realtime alignment of Illumina reads wwwhinge
Buster:(0.5.0-4) long read genome assembler based on hinging wwwhmmer
Buster & Stretch:(3.1b2-1) profile hidden Markov models for protein sequence analysis wwwhmmer2
Buster:(2.3.2+dfsg-6) Stretch:(2.3.2-13) profile hidden Markov models for protein sequence analysis wwwhmmer2-pvm
Buster:(2.3.2+dfsg-6) Stretch:(2.3.2-13) HMMER programs with PVM (Parallel Virtual Machine) support wwwhodie
Buster:(1.5.0-1) Stretch:(1.5-2) prints the date in Latin wwwhorae
Buster & Stretch:(071~svn537-2.1) interactive graphical processing and analysis of EXAFS data wwwhpcc
Buster:(1.5.0-1+b2) Stretch:(1.4.3-1+b2) HPC Challenge benchmark wwwhtcondor
Buster:(8.6.8~dfsg.1-2+b1) Stretch:(8.4.11~dfsg.1-1) distributed workload management system wwwhyantesite
Buster & Stretch:(1.3.0-1.1) geomatic tool to compute neighbourhood population potential wwwhyphy-common
Buster:(2.3.14+dfsg-1) Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (common files) wwwhyphy-mpi
Buster:(2.3.14+dfsg-1) Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (MPI version) wwwhyphy-pt
Buster:(2.3.14+dfsg-1) Stretch:(2.2.7+dfsg-1) Hypothesis testing using Phylogenies (pthreads version) www- Back to top
I
idba
Buster:(1.1.3-3) Stretch:(1.1.2-1) iterative De Bruijn Graph short read assemblers wwwifrit
Buster:(4.1.2-6+b1) Stretch:(4.1.2-5+b3) powerful tool for visualizing 3-dimensional data sets wwwigor
Buster:(1.3.0+dfsg-1) infers V(D)J recombination processes from sequencing data wwwigv
Buster & Stretch:(2.3.90+dfsg-1) Integrative Genomics Viewer wwwimagej
Buster:(1.52j-1) Stretch:(1.51i+dfsg-2) Image processing program with a focus on microscopy images wwwimagevis3d
Buster:(3.1.0-7+b1) Stretch:(3.1.0-5) desktop volume rendering application for large data wwwimview
Buster:(1.1.9h-1) Stretch:(1.1.9c-17+b1) Image viewing and analysis application wwwindelible
Buster:(1.03-4) Stretch:(1.03-2) powerful and flexible simulator of biological evolution wwwindigo-utils
Buster:(1.2.3-1) Stretch:(1.1.12-2) Organic Chemistry Toolkit Utilities wwwinfernal
Buster & Stretch:(1.0.2-2) inference of RNA secondary structural alignments wwwinhomog
Buster:(0.1.9.2-1) kinematical backreaction and average scale factor evolution wwwipig
Buster:(0.0.r5-3) Stretch:(0.0.r5-2) integrating PSMs into genome browser visualisations wwwiraf
Buster:(2.16.1+2018.11.01-2) Image Reduction and Analysis Facility wwwiraf-dev
Buster:(2.16.1+2018.11.01-2) Image Reduction and Analysis Facility (development files) wwwiraf-fitsutil
Buster:(2018.07.06-3+b1) FITS utilities for IRAFiraf-mscred
Buster:(5.05+2018.07.09-1+b1) CCD mosaic reduction package for IRAFiraf-noao
Buster:(2.16.1+2018.11.01-2) IRAF NOAO data reduction package wwwiraf-noao-dev
Buster:(2.16.1+2018.11.01-2) IRAF NOAO data reduction package (development files) wwwiraf-rvsao
Buster:(2.8.3-1+b1) IRAF package to obtain radial velocities from spectra wwwiraf-sptable
Buster:(1.0~pre20180612-1+b1) IRAF package for Tabular Spectrairaf-wcstools
Buster:(3.9.5-3) Handle the WCS of a FITS image (IRAF package) wwwirstlm
Buster & Stretch:(6.00.05-2) IRST Language Modeling Toolkit wwwismrmrd-schema
Buster:(1.4.0-1) Stretch:(1.3.3-1+rpi1) schema for ISMRMRD wwwiva
Buster:(1.0.9+ds-6) Stretch:(1.0.8+ds-1) iterative virus sequence assembler www- Back to top
J
jaligner
Buster:(1.0+dfsg-6) Stretch:(1.0+dfsg-4) Smith-Waterman algorithm with Gotoh's improvement wwwjalview
Buster & Stretch:(2.7.dfsg-5) multiple alignment editor wwwjblas
Buster:(1.2.4-2) Stretch:(1.2.3-6) fast linear algebra library for Java wwwjellyfish1
Buster:(1.1.11-4) count k-mers in DNA sequences wwwjemboss
Buster:(6.6.0+dfsg-7) Stretch:(6.6.0+dfsg-6) graphical user interface to EMBOSS wwwjmodeltest
Buster:(2.1.10+dfsg-7) Stretch:(2.1.10+dfsg-5) HPC selection of models of nucleotide substitution wwwjmol
Buster:(14.6.4+2016.11.05+dfsg1-4) Stretch:(14.6.4+2016.11.05+dfsg1-3) Molecular Viewer wwwjsamp
Buster & Stretch:(1.3.5-1) Java Simple Application Messaging Protocol tool for VO wwwjube
Buster:(2.2.2-1) JUBE Benchmarking Environment wwwjulia
Buster:(1.0.3+dfsg-4+rpi1) high-performance programming language for technical computing wwwjulia-common
Buster:(1.0.3+dfsg-4+rpi1) Stretch:(0.4.7-6) high-performance programming language for technical computing (common files) wwwjulia-factcheck
Buster & Stretch:(0.1.2-2) Midje-like testing for Julia wwwjupyter-notebook
Buster:(5.7.8-1) Stretch:(4.2.3-4+deb9u2) Jupyter interactive notebook www- Back to top
K
kalign
Buster:(1:2.03+20110620-5) Stretch:(1:2.03+20110620-3) Global and progressive multiple sequence alignment wwwkalzium
Buster:(4:17.08.3-1+b1) Stretch:(4:16.08.3-1) periodic table and chemistry tools wwwkalzium-data
Buster:(4:17.08.3-1) Stretch:(4:16.08.3-1) data files for Kalzium wwwkhmer-common
Buster:(2.1.2+dfsg-6) Stretch:(2.0+dfsg-10) common files for the khmer project tools wwwkineticstools
Buster:(0.6.1+git20180425.27a1878-2) Stretch:(0.6.1+20161222-1) detection of DNA modifications wwwkineticstools-data
Buster:(0.6.1+git20180425.27a1878-2) Stretch:(0.6.1+20161222-1) detection of DNA modifications -- data files wwwking-probe
Buster:(2.16.160404+git20180613.a09b012-1) Stretch:(2.13.110909-2) Evaluate and visualize protein interatomic packing wwwkissplice
Buster & Stretch:(2.1.0-1) Detection of various kinds of polymorphisms in RNA-seq data wwwklustakwik
Buster & Stretch:(2.0.1-1) automatic sorting of the samples (spikes) into clusters wwwkmc
Buster:(2.3+dfsg-7) Stretch:(2.3+dfsg-5) count kmers in genomic sequences wwwkmer
Buster:(0~20150903+r2013-6) Stretch:(0~20150903+r2013-3) suite of tools for DNA sequence analysis wwwkmer-examples
Buster:(0~20150903+r2013-6) sample data for kmer suite of tools for DNA sequence analysis wwwkonclude
Buster:(0.6.2~dfsg-6) Stretch:(0.6.2~dfsg-3) tableau-based description logic reasoner for the semantic web wwwkraken
Buster:(1.1-3) Stretch:(0.10.5~beta-2) assigning taxonomic labels to short DNA sequences wwwkst
Buster:(2.0.8-3+b1) Stretch:(2.0.3-5+b3) scientific data plotting tool wwwkstars
Buster:(5:3.0.0-1) Stretch:(4:16.08.3-2) desktop planetarium, observation planning and telescope control wwwkstars-data
Buster:(5:3.0.0-1) Stretch:(4:16.08.3-2) data files for KStars desktop planetarium wwwkstars-data-extra-tycho2
Buster & Stretch:(1.1r1-9.1) Tycho-2 star catalog for KStarskxterm
Buster:(20061220+dfsg3-4.4) Stretch:(20061220+dfsg3-4.3+deb9u2) CERNLIB data analysis suite - KUIP terminal emulator www- Back to top
L
lagan
Buster:(2.0-3) highly parametrizable pairwise global genome sequence aligner wwwlamarc
Buster:(2.1.10.1+dfsg-3) Likelihood Analysis with Metropolis Algorithm using Random Coalescence wwwlambda-align
Buster:(1.0.3-5) Stretch:(1.0.1-2) Local Aligner for Massive Biological DatA wwwlambda-align2
Buster:(2.0.0-6) Local Aligner for Massive Biological DatA - v2 wwwlammps
Buster:(0~20181211.gitad1b1897d+dfsg1-2) Stretch:(0~20161109.git9806da6-7) Molecular Dynamics Simulator wwwlast-align
Buster:(963-2) Stretch:(830-1) genome-scale comparison of biological sequences wwwlbt
Buster & Stretch:(1.2.2-6) converts from LTL formulas to Büchi automata wwwleaff
Buster:(0~20150903+r2013-6+b3) Stretch:(0~20150903+r2013-3+b2) biological sequence library utilities and applications wwwlefse
Buster:(1.0.8-2) Stretch:(1.0+20160802-1) determine features of organisms, clades, taxonomic units, genes wwwlibadios-bin
Buster:(1.13.1-16) Stretch:(1.11.0-1+b1) ADIOS Adaptable IO system for simulations - binaries wwwlibadios-examples
Buster:(1.13.1-16) Examples for the ADIOS Adaptable IO system wwwlibball1.5-data
Buster:(1.5.0+git20180813.37fc53c-3) Biochemical Algorithms Library (data files) wwwlibbio-tools-phylo-paml-perl
Buster:(1.7.3-2) Bioperl interface to the PAML suite wwwlibbio-tools-run-alignment-clustalw-perl
Buster:(1.7.4-1) Bioperl interface to Clustal W wwwlibbio-tools-run-alignment-tcoffee-perl
Buster:(1.7.4-1) Bioperl interface to T-Coffee wwwlibclhep2.1v5
Buster & Stretch:(2.1.4.1+dfsg-1) CLHEP: A Class Library for High Energy Physics wwwlibclinica0
Buster & Stretch:(0.3.0-1) Simple medical records manager (shared library) wwwlibcollada-dom2.4-dp0
Buster & Stretch:(2.4.4+ds1-2) collada-dom 2.4.0 - COLLADA using double precision wwwlibdynamicedt3d1.8
Buster & Stretch:(1.8.1+dfsg-1) Incrementally updatable Euclidean distance transform library wwwlibeccodes-data
Buster:(2.12.0-1) Stretch:(2.0.2-5) GRIB and BUFR enecoding/encoding software library - data wwwlibej0
Buster:(4.4.4+dfsg-4) Stretch:(4.2.1+dfsg-1) hardware & software framework for developing science experiments wwwlibgeotiff-epsg
Buster:(1.4.3-1) Stretch:(1.4.2-1) GeoTIFF library -- EPSG Geodetic Parameter Dataset wwwlibgfsgl0
Buster:(20121130+dfsg-6) Stretch:(20121130+dfsg-4) graphical viewer for Gerris simulation files. Shared library wwwlibghemical-data
Buster:(3.0.0-4.2) Stretch:(3.0.0-4.1) Molecular Modelling Library (data files) wwwlibgiac0
Buster:(1.4.9.69+dfsg1-2) Computer Algebra System C++ library wwwlibgnuradio-fcdproplus3.7.11
Buster:(3.7.25.4b6464b-5+b2) Funcube Dongle Pro Plus controller for GNU Radio (runtime) wwwlibgrib-api-data
Buster & Stretch:(1.8.0.1-1) grib_api definition files wwwlibgtkdatabox0-glade
Buster:(1:0.9.3.1-1) Gtk+ library to display large amounts of numerical data (glade API) wwwlibgtkdatabox0-libglade
Buster:(1:0.9.3.1-1) Gtk+ library to display large amounts of numerical data (glade lib) wwwlibhdf5-jni
Buster:(1.10.4+repack-10) Stretch:(1.10.0-patch1+docs-3+deb9u1) native library used by libhdf5-java wwwliblas-bin
Buster:(1.8.1-10) Stretch:(1.8.1-3) ASPRS LiDAR data translation toolset wwwliblemon-utils
Buster:(1.3.1+dfsg-2) Stretch:(1.3.1+dfsg-1) Library for Efficient Modeling and Optimization in Networks (utilities) wwwlibliggghts3
Buster:(3.8.0+repack1-4) Stretch:(3.5.0+repack1-10) Open Source DEM Particle Simulation Software. Shared library wwwliblinear-tools
Buster:(2.1.0+dfsg-4) Stretch:(2.1.0+dfsg-2) Standalone applications for LIBLINEAR wwwliblorene-debian1
Buster:(0.0.0~cvs20161116+dfsg-1+b2) Stretch:(0.0.0~cvs20161116+dfsg-1) liblorene shared library wwwliblorene-export-debian0
Buster:(0.0.0~cvs20161116+dfsg-1+b2) Stretch:(0.0.0~cvs20161116+dfsg-1) liblorene_export shared library wwwliblorenef77-debian1
Buster:(0.0.0~cvs20161116+dfsg-1+b2) Stretch:(0.0.0~cvs20161116+dfsg-1) liblorenef77 shared library wwwlibmed-tools
Buster:(4.0.0+repack-7) Stretch:(3.0.6-11) Runtime tools to handle MED files wwwlibmstoolkit-tools
Buster:(82-6) libraries for manipulating mass spectrometry data - tools wwwlibncarg-bin
Buster:(6.5.0-2) Stretch:(6.3.0-13) NCAR command-language library - development tools wwwlibncarg-data
Buster:(6.5.0-2) Stretch:(6.3.0-13) NCAR command-language library - Data wwwlibngram-tools
Buster:(1.3.2-3) Stretch:(1.3.0-1) OpenGRM n-gram Language Modeling toolkit wwwlibocas-tools
Buster:(0.97+dfsg-5) Stretch:(0.97+dfsg-3) Standalone applications implementing the OCAS solver wwwliboctomap1.8
Buster & Stretch:(1.8.1+dfsg-1) 3D occupancy grid mapping approach library for mapping wwwlibopenfoam
Buster:(1812+dfsg1-2) Stretch:(4.1+dfsg1-1) Open source toolbox for Computational Fluid Dynamics (CFD) - libraries wwwlibopengm-bin
Buster:(2.3.6+20160905-1+rpi1) Stretch:(2.3.6+20160905-1+b1) command line tools for OpenGM wwwlibpluto-jpl-eph-dev
Buster:(0.0~git20180228-1.1) development files to interact with JPL ephemeres data wwwlibpluto-lunar-dev
Buster:(0.0~git20180825.e34c1d1-1) development files for astronomical Lunar library wwwlibpwiz-tools
Buster:(3.0.18342-2) Stretch:(3.0.9393-1+b1) ProteoWizard command line tools wwwlibqgis-customwidgets
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) QGIS custom widgets for Qt Designer wwwlibrsl1
Buster:(1.43-1.2) Stretch:(1.43-1.1) TRMM Radar Software Library wwwlibsilo-bin
Buster:(4.10.2.real-5+b1) Stretch:(4.10.2-6+b2) Utilities to manipulate libsilo files wwwlibssm-bin
Buster:(1.4.0-1) macromolecular superposition library - binaries wwwlibstxxl1v5
Buster:(1.4.1-3) Stretch:(1.4.1-2) C++ Standard Template Library for extra large datasets wwwlibxy-bin
Buster & Stretch:(1.3-1.1) xylib - utilities wwwliggghts
Buster:(3.8.0+repack1-4) Stretch:(3.5.0+repack1-10) Open Source DEM Particle Simulation Software. wwwlimereg
Buster:(1.4.1-4) Stretch:(1.4.0-2) Lightweight Image Registration wwwlinguider
Buster:(4.1.1-1) Astronomical autoguiding program for Linux wwwlitl-tools
Buster:(0.1.9-4) Stretch:(0.1.8-2) Lightweight Trace Library - tools wwwlogcentral
Buster:(2.7-1.1+b1) Stretch:(2.7-1.1) Logging service for distributed applications wwwlogcentral-tools
Buster:(2.7-1.1+b1) Stretch:(2.7-1.1) Logging service for distributed applications wwwlogol
Buster:(1.7.9-1) Stretch:(1.7.5-1) Pattern matching tool using Logol language wwwlogol-bin
Buster:(1.7.9-1+b1) Stretch:(1.7.5-1) Pattern matching tool using Logol language wwwloki
Buster:(2.4.7.4-8) Stretch:(2.4.7.4-6) MCMC linkage analysis on general pedigreeslooptools
Buster & Stretch:(2.8-1) Integral Evaluator of One-loop Feynman Diagram wwwlorene
Buster & Stretch:(0.0.0~cvs20161116+dfsg-1) framework for numerical relativity wwwlorene-codes-src
Buster & Stretch:(0.0.0~cvs20161116+dfsg-1) source files of LORENE-based codes wwwltrsift
Buster:(1.0.2-8) Stretch:(1.0.2-7) postprocessing and classification of LTR retrotransposons wwwlttoolbox
Buster:(3.5.0-3) Stretch:(3.3.3~r68466-2) Apertium lexical processing modules and tools wwwlttoolbox-dev
Buster:(3.5.0-3) Stretch:(3.3.3~r68466-2) Development tools and library for lttoolbox wwwlucy
Buster:(1.20-1) DNA sequence quality and vector trimming tool wwwlutefisk
Buster & Stretch:(1.0.7+dfsg-4) de novo interpretation of peptide CID spectra wwwlxi-tools
Buster:(1.21-1) LAN eXtensions for Instrumentation (LXI) software interface www- Back to top
M
macs
Buster:(2.1.2.1-1) Stretch:(2.1.1.20160309-1) Model-based Analysis of ChIP-Seq on short reads sequencers wwwmacsyfinder
Buster:(1.0.5-2) Stretch:(1.0.2-3) detection of macromolecular systems in protein datasets wwwmaffilter
Buster:(1.3.1+dfsg-1) Stretch:(1.1.0-1+dfsg-2+b1) process genome alignment in the Multiple Alignment Format wwwmaffilter-examples
Buster:(1.3.1+dfsg-1) Stretch:(1.1.0-1+dfsg-2) process genome alignment in the Multiple Alignment Format (example data) wwwmafft
Buster:(7.407-2) Stretch:(7.307-1) Multiple alignment program for amino acid or nucleotide sequences wwwmagics++
Buster:(3.3.1-1) Stretch:(2.30.0-5) Executables for the magics++ library wwwmapdamage
Buster:(2.0.9+dfsg-1) Stretch:(2.0.6+dfsg-2) tracking and quantifying damage patterns in ancient DNA sequences wwwmapsembler2
Buster:(2.2.4+dfsg-3+b1) Stretch:(2.2.3+dfsg-3+b1) bioinformatics targeted assembly software wwwmaq
Buster:(0.7.1-8) Stretch:(0.7.1-7) maps short fixed-length polymorphic DNA sequence reads to reference sequences wwwmaqview
Buster:(0.2.5-9) Stretch:(0.2.5-7) graphical read alignment viewer for short gene sequences wwwmash
Buster:(2.1+dfsg-2) Stretch:(1.1.1-2) fast genome and metagenome distance estimation using MinHash wwwmatlab-gdf
Buster:(0.1.2-2.1) Stretch:(0.1.2-2) IO library for the GDF -- Matlab interface wwwmaude
Buster & Stretch:(2.7-2) high-performance logical framework wwwmauve-aligner
Buster:(2.4.0+4736-1+b4) Stretch:(2.4.0+4734-3) multiple genome alignment wwwmayavi2
Buster:(4.5.0-1+b1) Stretch:(4.5.0-1) scientific visualization package for 2-D and 3-D data wwwmbt
Buster:(3.4-1) Stretch:(3.2.16-1) memory-based tagger-generator and tagger wwwmbtserver
Buster:(0.12-1) Stretch:(0.11-1) Server extensions for the MBT tagger wwwmeep
Buster:(1.7.0-3) Stretch:(1.3-4+b1) software package for FDTD simulation wwwmeep-lam4
Buster:(1.7.0-3) Stretch:(1.3-2+b1) software package for FDTD simulation, parallel (OpenMPI) version wwwmeep-mpi-default
Buster:(1.7.0-3) Stretch:(1.3-3+b3) software package for FDTD simulation, parallel (OpenMPI) version wwwmeep-mpich2
Buster:(1.7.0-3) Stretch:(1.3-4+b1) software package for FDTD simulation, parallel (OpenMPI) version wwwmeep-openmpi
Buster:(1.7.0-3) Stretch:(1.3-3+b3) software package for FDTD simulation, parallel (OpenMPI) version wwwmelting
Buster:(5.2.0-1) Stretch:(4.3.1+dfsg-2) compute the melting temperature of nucleic acid duplex wwwmerkaartor
Buster:(0.18.3+ds-5+b1) Stretch:(0.18.3+ds-1+b1) map editor for OpenStreetMap.org wwwmeryl
Buster:(0~20150903+r2013-6+b3) Stretch:(0~20150903+r2013-3+b2) in- and out-of-core kmer counting and utilities wwwmetaphlan2
Buster:(2.7.8-1) Stretch:(2.6.0+ds-2) Metagenomic Phylogenetic Analysis wwwmetaphlan2-data
Buster:(2.6.0+ds-4) Stretch:(2.6.0+ds-2) data package for Metagenomic Phylogenetic Analysis wwwmetastudent
Buster:(2.0.1-6) Stretch:(2.0.1-4) predictor of Gene Ontology terms from protein sequence wwwmetastudent-data
Buster:(2.0.1-4) Stretch:(2.0.1-2) predictor of Gene Ontology terms from protein sequence - data files wwwmetastudent-data-2
Buster:(1.0.0-4) Stretch:(1.0.0-2) predictor of Gene Ontology terms from protein sequence - data #2 wwwmetview
Buster:(5.3.0-2) Stretch:(4.8.0-4) Interactive data visualization and analysis environment, wwwmetview-data
Buster:(5.3.0-2) Stretch:(4.8.0-4) Data needed for the Metview data analysis environment wwwmgltools-cadd
Buster:(1.5.7-4) Stretch:(1.5.7-1) Computer Aided Drug Discovery (CADD) Pipeline wwwmgltools-dejavu
Buster:(1.5.7-3) Stretch:(1.5.7-1) visualization of 3D geometry using the OpenGL with Python wwwmgltools-mglutil
Buster:(1.5.7-4) Stretch:(1.5.7-2) Molecular Graphics Laboratory utility collection wwwmgltools-molkit
Buster:(1.5.7-3) Stretch:(1.5.7~rc1+cvs.20140424-1) Python classes to read and manipulate molecules wwwmgltools-networkeditor
Buster:(1.5.7-4) Stretch:(1.5.7-1) Python GUI library for the editing of networks wwwmgltools-pmv
Buster & Stretch:(1.5.7-1) Python-based Molecular Viewer wwwmgltools-pmv-test
Buster & Stretch:(1.5.7-1) Python-based Molecular Viewer (functionality tests) wwwmgltools-pyautodock
Buster:(1.5.7-3) Stretch:(1.5.7-1) Python implementation of autodock wwwmgltools-pybabel
Buster:(1.5.7-3) Stretch:(1.5.7-1) molecular structure file access and interpretation wwwmgltools-scenario2
Buster:(1.5.7-2) Stretch:(1.5.7-1) Python-based viewer of molecular structures wwwmgltools-support
Buster:(1.5.7-3) Stretch:(1.5.7-1) Update mechanism of MGLTools wwwmgltools-symserv
Buster:(1.5.7-2) Stretch:(1.5.7-1) Symetry server wwwmgltools-viewerframework
Buster:(1.5.7-3) Stretch:(1.5.7-1) ViewerFramework supports building visualization applications wwwmgltools-vision
Buster:(1.5.7+dfsg-2) Stretch:(1.5.7-1) Python-based Visual Programming Environment wwwmgltools-visionlibraries
Buster:(1.5.7-2) Stretch:(1.5.7-1) Extensions for Python-based Visual Programming Environment wwwmgltools-volume
Buster:(1.5.7-3) Stretch:(1.5.7-1) Volume rendering Python package wwwmgltools-webservices
Buster:(1.5.7-3) Stretch:(1.5.7-1) webservices for components of autodocktools wwwmhap
Buster:(2.1.3+dfsg-2) Stretch:(2.1.1+dfsg-1) locality-sensitive hashing to detect long-read overlaps wwwmia-doctools
Buster:(2.4.6-4) Stretch:(2.4.3-5) Helper scripts for run-time document creation wwwmia-tools
Buster:(2.4.6-4+b1) Stretch:(2.4.3-5) Command line tools for gray scale image processing wwwmia-viewit
Buster:(1.0.5-2) Stretch:(1.0.4-1) Viewer program for 3D data sets created by using MIA wwwmialmpick
Buster:(0.2.14-2) Stretch:(0.2.13-1) Tools for landmark picking in 3D volume data sets wwwmicrobegps
Buster:(1.0.0-3) Stretch:(1.0.0-2) explorative taxonomic profiling tool for metagenomic data wwwmicrobiomeutil
Buster:(20101212+dfsg1-2) Stretch:(20101212+dfsg1-1) Microbiome Analysis Utilities wwwmicrobiomeutil-data
Buster:(20101212+dfsg1-2) Stretch:(20101212+dfsg1-1) Reference 16S sequences and NAST-alignments used by microbiomeutil tools wwwmicrohope
Buster:(4.4.4+dfsg-4) Stretch:(4.2.1+dfsg-1) hardware & software framework to learn microcontrollers wwwminc-tools
Buster:(2.3.00+dfsg-3+b1) Stretch:(2.3.00+dfsg-1.1+b1) MNI medical image format tools wwwminia
Buster:(1.6906-2) Stretch:(1.6906-1) short-read biological sequence assembler wwwminiasm
Buster:(0.3+dfsg-1) Stretch:(0.2+dfsg-2) ultrafast de novo assembler for long noisy DNA sequencing reads wwwminimap
Buster:(0.2-4) Stretch:(0.2-3) tool for approximate mapping of long biosequences such as DNA reads wwwminisat
Buster & Stretch:(1:2.2.1-5) Fast and lightweight SAT solver wwwminisat+
Buster:(1.0-4) Stretch:(1.0-3) solver for pseudo-Boolean constraints wwwmipe
Buster:(1.1-7) Stretch:(1.1-5) Tools to store PCR-derived data wwwmira-assembler
Buster:(4.9.6-4) Stretch:(4.9.6-2) Whole Genome Shotgun and EST Sequence Assembler wwwmira-rfam-12s-rrna
Buster:(4.9.6-4) Stretch:(4.9.6-2) extract of RFAM 12 rRNA database wwwmissfits
Buster:(2.8.0-2) Stretch:(2.8.0-1) Basic maintenance and packaging tasks on FITS files wwwmitools
Buster:(2.0.3-1) Stretch:(2.0.2-0.3+rpi1) view, convert and perform basic maths with medical image datasets wwwmlpack-bin
Buster:(3.0.4-1) Stretch:(2.1.1-1) intuitive, fast, scalable C++ machine learning library (binaries) wwwmlv-smile
Buster:(1.47-6) Stretch:(1.47-4) Find statistically significant patterns in sequences wwwmmass
Buster & Stretch:(5.5.0-5) Mass spectrometry tool for proteomics wwwmmass-modules
Buster & Stretch:(5.5.0-5) Mass spectrometry tool for proteomics - extension modules wwwmobyle
Buster:(1.5.5+dfsg-6) Stretch:(1.5.5+dfsg-2) Web portal that provides web forms for command-line software wwwmobyle-programs
Buster:(5.1.2-3) Stretch:(5.1.2-1) program descriptions for the mobyle portal wwwmobyle-tutorials
Buster:(1.5.0-4) Stretch:(1.5.0-2) program tutorials for the mobyle portal wwwmobyle-utils
Buster:(1.5.5+dfsg-6) Stretch:(1.5.5+dfsg-2) binary tools used by Mobyle wwwmocassin
Buster:(2.02.73-1) Stretch:(2.02.72-2) MOnte CArlo SimulationS of Ionised Nebulae wwwmocassin-benchmarks
Buster:(2.02.73-1) Stretch:(2.02.72-2) benchmarks for the photoionisation code MOCASSIN wwwmocassin-data
Buster:(2.02.73-1) Stretch:(2.02.72-2) atomic and optical data for the photoionisation code MOCASSIN wwwmocassin-examples
Buster:(2.02.73-1) Stretch:(2.02.72-2) Examples for the photoionisation code MOCASSIN wwwmolds
Buster:(0.3.1-1+b3) Stretch:(0.3.1-1+b2) Semi-empirical electronic structure and molecular dynamics wwwmona
Buster & Stretch:(1.4-17-1) theorem prover based on automata wwwmontage
Buster:(6.0+dfsg-6) Stretch:(4.0+dfsg-3+b3) Toolkit for assembling FITS images into mosaics wwwmontage-gridtools
Buster:(6.0+dfsg-6) Stretch:(4.0+dfsg-3+b3) Create files to run montage on the grid wwwmontecarlo-base
Buster & Stretch:(20061220+dfsg3-3.1) [Physics] Common files for CERNLIB Monte Carlo libraries wwwmontecarlo-data
Buster & Stretch:(20061220+dfsg3-3.1) [Physics] data for CERNLIB Monte Carlo libraries wwwmopac7-bin
Buster & Stretch:(1.15-6) Semi-empirical Quantum Chemistry Library (binaries) wwwmorse-simulator
Buster:(1.4-5) Stretch:(1.4-2+b3) Multi-OpenRobot Simulation Engine wwwmorse-simulator-data
Buster:(1.4-5) Stretch:(1.4-2) Multi-OpenRobot Simulation Engine wwwmothur
Buster:(1.41.21-1) Stretch:(1.38.1.1-1) sequence analysis suite for research on microbiota wwwmozilla-biofox
Buster & Stretch:(1.6-1) extension of bioinformatics tools to Iceape and Iceweasel browsers wwwmpb
Buster:(1.7.0-5) Stretch:(1.5-2+b5) MIT Photonic-Bands wwwmpb-mpi
Buster:(1.7.0-5) Stretch:(1.5-2+b5) MIT Photonic-Bands, parallel (mpich) version wwwmpb-scm
Buster:(1.7.0-5) Stretch:(1.5-2) MIT Photonic-Bands initialisation files wwwmpgrafic
Buster:(0.3.18-1) MPI version of N-body initial conditions grafic package wwwmpi-testsuite
Buster:(3.2+dfsg-1) MPI testsuite results wwwmpqc
Buster:(2.3.1-19) Stretch:(2.3.1-18+deb9u1) Massively Parallel Quantum Chemistry Program wwwmpqc-support
Buster:(2.3.1-19) Stretch:(2.3.1-18+deb9u1) Massively Parallel Quantum Chemistry Program (support tools) wwwmpqc3-data
Buster:(0.0~git20170114-4.1) Stretch:(0.0~git20160216-7) Massively Parallel Quantum Chemistry Program (data files) wwwmptp
Buster:(0.2.4-1) single-locus species delimitation wwwmrbayes
Buster:(3.2.6+dfsg-2+b6) Stretch:(3.2.6+dfsg-1+b2) Bayesian Inference of Phylogeny wwwmrbayes-mpi
Buster:(3.2.6+dfsg-2+b6) Stretch:(3.2.6+dfsg-1+b2) Bayesian Inference of Phylogeny - mpi version wwwmriconvert
Buster:(1:2.1.0-3) Stretch:(1:2.1.0-1) medical image file conversion utility wwwmricron
Buster:(0.20140804.1~dfsg.1-3) Stretch:(0.20140804.1~dfsg.1-2) magnetic resonance image conversion, viewing and analysis wwwmricron-data
Buster:(0.20140804.1~dfsg.1-3) Stretch:(0.20140804.1~dfsg.1-2) data files for MRIcron wwwmrpt-apps
Buster:(1:1.5.6-1+b1) Stretch:(1:1.4.0-7) Mobile Robot Programming Toolkit - Console and GUI applications wwwmrpt-common
Buster:(1:1.5.6-1) Stretch:(1:1.4.0-7) Mobile Robot Programming Toolkit - Example datasets and files wwwmrtrix
Buster:(0.2.13-2) Stretch:(0.2.12-2) diffusion-weighted MRI white matter tractography wwwmseed2sac
Buster:(2.2+ds1-4) Convert MiniSEED time series data to SAC wwwmsxpertsuite
Buster:(5.7.3-1) mass spectrometry software suite - metapackage wwwmsxpertsuite-massxpert
Buster:(5.7.3-1) mass spectrometry software suite - massXpert wwwmsxpertsuite-massxpert-data-doc
Buster:(5.7.3-1) mass spectrometry software suite - massXpert - data and doc wwwmsxpertsuite-minexpert
Buster:(5.7.3-1) mass spectrometry software suite - mineXpert wwwmsxpertsuite-minexpert-data-doc
Buster:(5.7.3-1) mass spectrometry software suite - mineXpert - data and doc wwwmummer
Buster:(3.23+dfsg-4) Stretch:(3.23+dfsg-2) Efficient sequence alignment of full genomes wwwmunipack
Buster:(0.5.11-2) Stretch:(0.5.7-2) Astronomical photometry software package wwwmunipack-cli
Buster:(0.5.11-2) Stretch:(0.5.7-2) Command line interface of Munipack wwwmunipack-core
Buster:(0.5.11-2) Stretch:(0.5.7-2) Core routines of Munipack wwwmunipack-gui
Buster:(0.5.11-2) Stretch:(0.5.7-2) Graphical user interface of Munipack wwwmurasaki
Buster:(1.68.6-8+b8) Stretch:(1.68.6-6+b3) homology detection tool across multiple large genomes wwwmurasaki-common
Buster:(1.68.6-8) Stretch:(1.68.6-6) homology detection tool across multiple large genomes (common files) wwwmurasaki-mpi
Buster:(1.68.6-8+b8) Stretch:(1.68.6-6+b3) homology detection tool across multiple large genomes (MPI-version) wwwmuscle
Buster:(1:3.8.1551-2) Stretch:(1:3.8.31+dfsg-2) Multiple alignment program of protein sequences wwwmusic-bin
Buster:(1.0.7-4+b2) Stretch:(1.0.7-1.3) Multi-Simulation Coordinator for MPI -- Utilities wwwmustang
Buster:(3.2.3-3) Stretch:(3.2.3-1) multiple structural alignment of proteins wwwmustang-testdata
Buster:(3.2.3-3) Stretch:(3.2.3-1) multiple structural alignment of proteins, test data www- Back to top
N
nanook
Buster:(1.33+dfsg-1) pre- and post-alignment analysis of nanopore sequencing data wwwnast-ier
Buster:(20101212+dfsg1-2) Stretch:(20101212+dfsg1-1) NAST-based DNA alignment tool wwwnautic
Buster:(1.5-4) Stretch:(1.5-1.1+b1) computation of observer position in astro-navigation wwwncbi-blast+
Buster:(2.8.1-1+deb10u1) Stretch:(2.6.0-1) next generation suite of BLAST sequence search tools wwwncbi-blast+-legacy
Buster:(2.8.1-1+deb10u1) Stretch:(2.6.0-1) NCBI Blast legacy call script wwwncbi-entrez-direct
Buster:(10.9.20190219+ds-1) Stretch:(6.10.20170123+ds-1) NCBI Entrez utilities on the command line wwwncbi-epcr
Buster:(2.3.12-1-7) Stretch:(2.3.12-1-4) Tool to test a DNA sequence for the presence of sequence tagged sites wwwncbi-rrna-data
Buster:(6.1.20170106+dfsg1-0+deb10u2) Stretch:(6.1.20170106+dfsg1-0+deb9u1) large rRNA BLAST databases distributed with the NCBI toolkit wwwncbi-seg
Buster:(0.0.20000620-5) Stretch:(0.0.20000620-3) tool to mask segments of low compositional complexity in amino acid sequences wwwncbi-tools-bin
Buster:(6.1.20170106+dfsg1-0+deb10u2) Stretch:(6.1.20170106+dfsg1-0+deb9u1) NCBI libraries for biology applications (text-based utilities) wwwncbi-tools-x11
Buster:(6.1.20170106+dfsg1-0+deb10u2) Stretch:(6.1.20170106+dfsg1-0+deb9u1) NCBI libraries for biology applications (X-based utilities) wwwncl-ncarg
Buster:(6.5.0-2) Stretch:(6.3.0-13) NCAR Command Language and NCAR graphics wwwncl-tools
Buster:(2.1.21+git20180827.c71b264-2) Stretch:(2.1.18+dfsg-2) tools to deal with NEXUS files wwwnco
Buster:(4.7.9-1) Stretch:(4.6.3-1) Command-line operators to analyze netCDF files wwwncoils
Buster:(2002-7) Stretch:(2002-4) coiled coil secondary structure prediction wwwncview
Buster:(2.1.8+ds-3+b1) Stretch:(2.1.7+ds-1+b1) X11 visual browser for NetCDF format files wwwneat
Buster:(2.2-1) Stretch:(2.0-2) Nebular Empirical Analysis Tool wwwneobio
Buster:(0.0.20030929-4) Stretch:(0.0.20030929-2) computes alignments of amino acid and nucleotide sequences wwwnetcdf-bin
Buster:(1:4.6.2-1+b1) Stretch:(1:4.4.1.1-2) Programs for reading and writing NetCDF files wwwneurodebian
Buster:(0.38.3) Stretch:(0.37.6) neuroscience-oriented distribution - repository configuration wwwneurodebian-archive-keyring
Buster:(0.38.3) Stretch:(0.37.6) neuroscience-oriented distribution - GnuPG archive keys wwwneurodebian-desktop
Buster:(0.38.3) Stretch:(0.37.6) neuroscience-oriented distribution - desktop integration wwwneurodebian-dev
Buster:(0.38.3) Stretch:(0.37.6) neuroscience-oriented distribution - development tools wwwneurodebian-freeze
Buster:(0.38.3) nd_freeze tool to freeze APT sources to use snapshots wwwneurodebian-popularity-contest
Buster:(0.38.3) Stretch:(0.37.6) neuroscience-oriented distribution - popcon integration wwwnifti2dicom-data
Buster & Stretch:(0.4.11-1) data files for nifti2dicom wwwnjplot
Buster:(2.4-8) Stretch:(2.4-7) phylogenetic tree drawing program wwwnode-sphericalmercator
Buster & Stretch:(1.0.1-2) Spherical Mercator projection support for NodeJS wwwnorsnet
Buster:(1.0.17-4) Stretch:(1.0.17-2) tool to identify unstructured loops in proteins wwwnorsp
Buster:(1.0.6-4) Stretch:(1.0.6-2) predictor of non-regular secondary structure wwwnumdiff
Buster:(5.9.0-1) Stretch:(5.8.1-2) Compare similar files with numeric fields wwwnutsqlite
Buster:(2.0.6-1) Stretch:(1.9.9.3-2) Dietary nutrition analysis software wwwnwchem
Buster:(6.8.1-5) Stretch:(6.6+r27746-2+b1) High-performance computational chemistry software wwwnwchem-data
Buster:(6.8.1-5) Stretch:(6.6+r27746-2) High-performance computational chemistry software (data files) www- Back to top
O
oar-web-status
Buster:(2.5.8-1+deb10u1) Stretch:(2.5.7-3) OAR batch scheduler visualization tool package wwwobdgpslogger
Buster:(0.16-1.3+b1) Stretch:(0.16-1.3) suite of tools to log OBDII and GPS data wwwobjcryst-fox
Buster & Stretch:(1.9.6.0-2.1+b1) Free Objects for Xtallography wwwocct-draw
Buster:(7.3.0+dfsg1-5+rpi1) Open CASCADE Technology command interpreter and graphical test system wwwoce-draw
Buster:(0.18.2-3) Stretch:(0.17.2-2) OpenCASCADE Community Edition CAE platform shared library wwwoctave-bart
Buster:(0.4.04-2) Stretch:(0.4.00-1) Octave bindings for BART wwwoctave-biosig
Buster:(1.9.3-2) Stretch:(1.3.0-2.2) Octave bindings for BioSig library wwwoctave-gdf
Buster:(0.1.2-2.1+b2) Stretch:(0.1.2-2+b5) IO library for the GDF -- Octave interface wwwoctave-psychtoolbox-3
Buster:(3.0.15.20190207.dfsg1-1) Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) toolbox for vision research -- Octave bindings wwwoctomap-tools
Buster & Stretch:(1.8.1+dfsg-1) Tools for 3D occupancy grid mapping wwwodil
Buster:(0.10.0-3) Stretch:(0.7.3-1) C++11 library for the DICOM standard (application) wwwodin
Buster:(2.0.3-1) Stretch:(2.0.2-0.3+rpi1) develop, simulate and run magnetic resonance sequences wwwogdi-bin
Buster:(3.2.1+ds-4) Stretch:(3.2.0+ds-2) Open Geographic Datastore Interface Library -- utilities wwwompl-plannerarena
Buster:(1.4.2+ds1-1) Open Motion Planning Library (OMPL) plannerarena wwwopenbabel
Buster:(2.4.1+dfsg-3) Stretch:(2.3.2+dfsg-3) Chemical toolbox utilities (cli) wwwopenbabel-gui
Buster:(2.4.1+dfsg-3) Stretch:(2.3.2+dfsg-3) Chemical toolbox utilities (graphical user interface) wwwopencaster
Buster & Stretch:(3.2.2+dfsg-1.1) MPEG2 transport stream data generator and packet manipulator wwwopenfoam
Buster:(1812+dfsg1-2) Stretch:(4.1+dfsg1-1) Open source toolbox for Computational Fluid Dynamics (CFD) - binaries wwwopenfoam-examples
Buster:(1812+dfsg1-2) Stretch:(4.1+dfsg1-1) Open source toolbox for Computational Fluid Dynamics (CFD) - examples wwwopenmolar
Buster & Stretch:(1.0.15-gd81f9e5-1) dental practice management software wwwopenms
Buster:(2.4.0-real-1) Stretch:(2.0.0-4) package for LC/MS data management and analysis wwwopenms-common
Buster:(2.4.0-real-1) Stretch:(2.0.0-4) package for LC/MS data management and analysis - shared data wwwopenmx
Buster:(3.8.5+dfsg1-1) Stretch:(3.7.6-1+b2) package for nano-scale material simulations wwwopenmx-data
Buster:(3.8.5+dfsg1-1) Stretch:(3.7.6-1) package for nano-scale material simulations (data) wwwopenrocket
Buster:(15.03.5) Stretch:(15.03) Model Rocket Simulator wwwopensesame
Buster & Stretch:(0.27.4-2.1) graphical experiment builder for the social sciences wwwopenuniverse
Buster & Stretch:(1.0beta3.1+dfsg-6) 3D Universe Simulator wwwopenuniverse-common
Buster & Stretch:(1.0beta3.1+dfsg-6) 3D Universe Simulator data files wwwopj2dat
Buster & Stretch:(20080225-2.2) OriginLab Origin project files to data files converter wwwoptgeo
Buster:(2.25-1) Stretch:(2.23-1) simulator for geometrical optics wwwopticalraytracer
Buster & Stretch:(3.2-1.1) Virtual lens design workshop wwworigami
Buster & Stretch:(1.2.7+really0.7.4-1.1) command-line management tool for Folding @ Home clients wwworthanc
Buster:(1.5.6+dfsg-1) Stretch:(1.2.0+dfsg-1) Lightweight, RESTful DICOM server for medical imaging wwworthanc-dicomweb
Buster:(0.6+dfsg-1) Stretch:(0.3+dfsg-1+b6) Plugin to extend Orthanc with support of WADO and DICOMweb wwworthanc-imagej
Buster:(1.2+dfsg-1) Stretch:(1.1+dfsg-1) ImageJ plugin to import images from Orthanc wwworthanc-mysql
Buster:(2.0-2) Plugins to use MySQL or MariaDB as a database back-end to Orthanc wwworthanc-postgresql
Buster:(3.2-1) Stretch:(2.0-3) Plugins to use PostgreSQL as a database back-end to Orthanc wwworthanc-webviewer
Buster:(2.5-1) Stretch:(2.2-1+b6) Web viewer of medical images for Orthanc wwworthanc-wsi
Buster:(0.6-2) Whole-slide imaging support for Orthanc (digital pathology) wwwossim-core
Buster:(2.6.2-1) Stretch:(1.8.20.3+ds-5+b1) OSSIM core utilities wwwotf-trace
Buster:(1.12.5+dfsg-4) Stretch:(1.12.5+dfsg-2+b1) Open Trace Format support library - development files www- Back to top
P
p4vasp
Buster:(0.3.30+dfsg-5+b1) Stretch:(0.3.29+dfsg-3+b4) visualization suite for the Vienna Ab-initio Simulation Package (VASP) wwwpaje.app
Buster:(1.98-1+b7) Stretch:(1.98-1+b4) generic visualization tool (Gantt chart and more)pal2nal
Buster:(14.1-2) converts proteins to genomic DNA alignment wwwpaml
Buster:(4.9h+dfsg-1) Phylogenetic Analysis by Maximum Likelihood (PAML) wwwparaclu
Buster:(9-2) Stretch:(9-1) Parametric clustering of genomic and transcriptomic features wwwparaview
Buster:(5.4.1+dfsg4-3.1+b6) Stretch:(5.1.2+dfsg1-2) Parallel Visualization Application wwwparsinsert
Buster:(1.04-4) Stretch:(1.04-2) Parsimonious Insertion of unclassified sequences into phylogenetic trees wwwparsinsert-testdata
Buster:(1.04-4) Test data for parsinsert wwwparsnp
Buster:(1.2+dfsg-5+b1) Stretch:(1.2+dfsg-3) rapid core genome multi-alignment wwwpatman
Buster:(1.2.2+dfsg-5) rapid alignment of short sequences to large databases wwwpaw
Buster & Stretch:(1:2.14.04.dfsg.2-9.1) Physics Analysis Workstation - a graphical analysis program wwwpaw++
Buster & Stretch:(1:2.14.04.dfsg.2-9.1) Physics Analysis Workstation (Lesstif-enhanced version) wwwpaw-common
Buster & Stretch:(1:2.14.04.dfsg.2-9.1) Physics Analysis Workstation (common files) wwwpaw-demos
Buster & Stretch:(1:2.14.04.dfsg.2-9.1) Physics Analysis Workstation examples and tests wwwpbbamtools
Buster:(0.19.0+dfsg-4+rpi1) Stretch:(0.7.4+ds-1+rpi1) processing Pacific Biosciences binary alignment/map files wwwpbbarcode
Buster:(0.8.0-5) Stretch:(0.8.0-4) annotate PacBio sequencing reads with barcode information wwwpbdagcon
Buster:(0.3+git20161121.0000000+ds-1.1) Stretch:(0.3+20161121+ds-1) sequence consensus using directed acyclic graphs wwwpbgenomicconsensus
Buster:(2.3.2-5) Stretch:(2.1.0-1) Pacific Biosciences variant and consensus caller wwwpbh5tools
Buster:(0.8.0+git20170929.58d54ff+dfsg-1) Stretch:(0.8.0+dfsg-5) tools for manipulating Pacific Biosciences HDF5 files wwwpbhoney
Buster:(15.8.24+dfsg-3) Stretch:(15.8.24+dfsg-2) genomic structural variation discovery wwwpbjelly
Buster:(15.8.24+dfsg-3) Stretch:(15.8.24+dfsg-2) genome assembly upgrading tool wwwpbsim
Buster:(1.0.3+git20180330.e014b1d+dfsg-1) Stretch:(1.0.3-2) simulator for PacBio sequencing reads wwwpcl-tools
Buster:(1.9.1+dfsg1-10) Stretch:(1.8.0+dfsg1-4+deb9u1) Point Cloud Library - point cloud processing tools wwwpdb2pqr
Buster:(2.1.1+dfsg-5) Stretch:(2.1.1+dfsg-2) Preparation of protein structures for electrostatics calculations wwwpegasus-wms
Buster:(4.4.0+dfsg-8) Stretch:(4.4.0+dfsg-6) Scientific workflow management system for HTCondor wwwperlprimer
Buster:(1.2.4-1) Stretch:(1.2.3-1) Graphical design of primers for PCR wwwperm
Buster:(0.4.0-4) Stretch:(0.4.0-2) efficient mapping of short reads with periodic spaced seeds wwwphast
Buster:(1.4+dfsg-1) phylogenetic analysis with space/time models wwwphipack
Buster:(0.0.20160614-3) Stretch:(0.0.20160614-2) PHI test and other tests of recombination wwwphy-spread
Buster & Stretch:(1.0.3-1) analyze and visualize phylogeographic reconstructions wwwphybin
Buster:(0.3-3) Stretch:(0.3-1) binning/clustering newick trees by topology wwwphylip
Buster:(1:3.697+dfsg-1) Stretch:(1:3.696+dfsg-5) package of programs for inferring phylogenies wwwphyml
Buster:(3:3.3.20180621-2) Stretch:(3:3.2.0+dfsg-7) Phylogenetic estimation using Maximum Likelihood wwwphysamp
Buster:(1.1.0-1) Stretch:(0.2.0-1) sample sequence alignment corresponding to phylogeny wwwphyutility
Buster:(2.7.3+dfsg-2) Stretch:(2.7.3-1) simple analyses or modifications on both phylogenetic trees and data matrices wwwphyx
Buster:(0.999+ds-1) UNIX-style phylogenetic analyses on trees and sequences wwwpicosat
Buster & Stretch:(960-1) SAT solver with proof and core support wwwpiler
Buster:(0~20140707-2) Stretch:(0~20140707-1) genomic repeat analysis wwwpilon
Buster:(1.23+dfsg-1) automated genome assembly improvement and variant detection tool wwwpirs
Buster:(2.0.2+dfsg-8) Stretch:(2.0.2+dfsg-5.1+b1) Profile based Illumina pair-end Reads Simulator wwwpirs-examples
Buster:(2.0.2+dfsg-8) Stretch:(2.0.2+dfsg-5.1) profile basd Illumina pair-end Reads Simulator (example data) wwwpirs-profiles
Buster:(2.0.2+dfsg-8) Stretch:(2.0.2+dfsg-5.1) profile basd Illumina pair-end Reads Simulator (profile data) wwwpkg-r-autopkgtest
Buster:(20190121) Script for the automatic testing of R packagespktools
Buster:(2.6.7.6+ds-1+b1) Stretch:(2.6.7-3) GDAL add-on tools to perform useful raster processing wwwplacnet
Buster:(1.03-3) Stretch:(1.03-2) Plasmid Constellation Network project wwwplanets
Buster:(0.1.13-19) Stretch:(0.1.13-16) Gravitation simulation of planetary bodies wwwplasmidseeker
Buster:(1.0+dfsg-1) identification of known plasmids from whole-genome sequencing reads wwwplast-example
Buster:(2.3.2+dfsg-1) Stretch:(2.3.1+dfsg-4) Parallel Local Sequence Alignment Search Tool (example data) wwwplink
Buster:(1.07+dfsg-2) Stretch:(1.07-7) whole-genome association analysis toolset wwwplink1.9
Buster:(1.90~b6.6-181012-1) Stretch:(1.90~b3.45-170113-1) whole-genome association analysis toolset wwwpluto-jpl-eph
Buster:(0.0~git20180228-1.1) command line handling of JPL ephemeres data wwwpluto-lunar
Buster:(0.0~git20180825.e34c1d1-1) routines for predictions of positions in solar system wwwpoa
Buster:(2.0+20060928-7) Stretch:(2.0+20060928-4) Partial Order Alignment for multiple sequence alignment wwwpopulations
Buster:(1.2.33+svn0120106+dfsg-2) Stretch:(1.2.33+svn0120106-2.1) population genetic software wwwporechop
Buster:(0.2.4+dfsg-1) adapter trimmer for Oxford Nanopore reads wwwporetools
Buster:(0.6.0+dfsg-3) Stretch:(0.6.0+dfsg-2) toolkit for nanopore nucleotide sequencing data wwwporetools-data
Buster:(0.6.0+dfsg-3) Stretch:(0.6.0+dfsg-2) toolkit for nanopore nucleotide sequencing data -- sample datasets wwwpp-popularity-contest
Buster:(1.0.6-4) Stretch:(1.0.6-2+b3) PredictProtein popularity contest wwwpprepair
Buster:(0.0~20170614-dd91a21-3+b1) Stretch:(0.0~20160321-87ffae5-1+b3) planar partition repair tool wwwpraat
Buster:(6.0.32-1) Stretch:(6.0.23-1) program for speech analysis and synthesis wwwprank
Buster:(0.0.170427+dfsg-2) Stretch:(0.0.150803-2) Probabilistic Alignment Kit for DNA, codon and amino-acid sequences wwwpredictnls
Buster:(1.0.20-5) Stretch:(1.0.20-3) prediction and analysis of protein nuclear localization signals wwwpredictprotein
Buster:(1.1.08-1) Stretch:(1.1.07-2) suite of protein sequence analysis tools wwwprepair
Buster:(0.7.1-3+b1) Stretch:(0.7-6+b4) polygon repair tool wwwprepair-data
Buster:(0.7.1-3) Stretch:(0.7-6) polygon repair tool -- example data wwwprime-phylo
Buster:(1.0.11-7) Stretch:(1.0.11-4+b1) bayesian estimation of gene trees taking the species tree into account wwwprimer3
Buster:(2.4.0-2) Stretch:(2.3.7-3) tool to design flanking oligo nucleotides for DNA amplification wwwprimer3-examples
Buster:(2.4.0-2) Stretch:(2.3.7-3) tool to design flanking oligo nucleotides for DNA amplification (examples) wwwproalign
Buster:(0.603-4) Stretch:(0.603-2) Probabilistic multiple alignment program wwwprobabel
Buster:(0.5.0+dfsg-3) Stretch:(0.4.5-3) Toolset for Genome-Wide Association Analysis wwwprobabel-examples
Buster:(0.5.0+dfsg-3) Stretch:(0.4.5-3) Example files for ProbABEL wwwprobalign
Buster:(1.4-8) Stretch:(1.4-5) multiple sequence alignment using partition function posterior probabilities wwwprobcons
Buster:(1.12-12) Stretch:(1.12-11) PROBabilistic CONSistency-based multiple sequence alignment wwwprobcons-extra
Buster:(1.12-12) Stretch:(1.12-11) Extra programs from the probcons package wwwproda
Buster:(1.0-12) Stretch:(1.0-10) multiple alignment of protein sequences wwwprodigal
Buster:(1:2.6.3-4) Stretch:(1:2.6.3-1) Microbial (bacterial and archaeal) gene finding program wwwprofbval
Buster:(1.0.22-6) Stretch:(1.0.22-4) predictor of flexible/rigid protein residues from sequence wwwprofisis
Buster:(1.0.11-5) Stretch:(1.0.11-3) prediction of protein-protein interaction sites from sequence wwwprofnet-bval
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profbval wwwprofnet-chop
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profchop wwwprofnet-con
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profcon wwwprofnet-isis
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profisis wwwprofnet-md
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for metadisorder wwwprofnet-norsnet
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for norsnet wwwprofnet-prof
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profacc wwwprofnet-snapfun
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for snapfun wwwprofphd
Buster:(1.0.42-3) Stretch:(1.0.42-1) secondary structure and solvent accessibility predictor wwwprofphd-net
Buster:(1.0.22-6) Stretch:(1.0.22-4) neural network architecture for profphd wwwprofphd-utils
Buster:(1.0.10-5) Stretch:(1.0.10-3) profphd helper utilities convert_seq and filter_hssp wwwproftmb
Buster:(1.1.12-8) Stretch:(1.1.12-6) per-residue prediction of bacterial transmembrane beta barrels wwwprogressivemauve
Buster:(1.2.0+4713+dfsg-4) Stretch:(1.2.0+4713-2) multiple genome alignment algorithms wwwproj-bin
Buster:(5.2.0-1) Stretch:(4.9.3-1) Cartographic projection library (tools) wwwproj-rdnap
Buster:(2008-8) Stretch:(2008-6) RDNAP grid correction files for PROJ wwwprooftree
Buster:(0.13-1+b28) Stretch:(0.13-1) proof-tree visualization for Proof General wwwproteinortho
Buster:(5.16.b+dfsg-1) Stretch:(5.15+dfsg-1) Detection of (Co-)orthologs in large-scale protein analysis wwwprottest
Buster:(3.4.2+dfsg-3) Stretch:(3.4.2+dfsg-2) selection of best-fit models of protein evolution wwwpscan-chip
Buster:(1.1-2) ChIP-based identifcation of TF binding sites wwwpscan-chip-data
Buster:(1.1-2) auxiliary data for PScan-ChIP wwwpscan-tfbs
Buster:(1.2.2-3) search for transcription factor binding sites wwwpsfex
Buster:(3.17.1+dfsg-5) Stretch:(3.17.1+dfsg-3+b1) Point Spread Function model extractor wwwpsi3
Buster & Stretch:(3.4.0-6) Quantum Chemical Program Suite wwwpsi4
Buster:(1:1.2.1-2) Stretch:(1:1.0-1+b1) Quantum Chemical Program Suite wwwpsi4-data
Buster:(1:1.2.1-2) Stretch:(1:1.0-1) Quantum Chemical Program Suite (data files) wwwpsychtoolbox-3-common
Buster:(3.0.15.20190207.dfsg1-1) Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) toolbox for vision research -- arch/interpreter independent part wwwpsychtoolbox-3-lib
Buster:(3.0.15.20190207.dfsg1-1) Stretch:(3.0.14.20170103+git6-g605ff5c.dfsg1-1) toolbox for vision research -- arch-specific parts wwwpurify
Buster:(2.0.0-4+b2) Stretch:(2.0.0-1) Collection of routines for radio interferometric imaging wwwpyfai
Buster:(0.17.0+dfsg1-3) Stretch:(0.13.0+dfsg-1) Fast Azimuthal Integration scripts wwwpyformex
Buster & Stretch:(0.8.6-4) program to create 3D geometry from Python scripts. wwwpyformex-lib
Buster:(0.8.6-4+b2) Stretch:(0.8.6-4+b1) program to create 3D geometry from Python scripts. wwwpyfr
Buster:(1.5.0-3) Stretch:(1.5.0-1) flux reconstruction in Python wwwpymca
Buster:(5.4.3+dfsg-1) Stretch:(5.1.3+dfsg-1) Applications and toolkit for X-ray fluorescence analysis -- scripts wwwpymca-data
Buster:(5.4.3+dfsg-1) Stretch:(5.1.3+dfsg-1) Architecture independent data files for PyMca wwwpymoctool
Buster:(0.5.0-4) Stretch:(0.4.2-1) Python Multi-Order Coverage maps tool for Virtual Observatory wwwpymol
Buster:(2.2.0+dfsg-4) Stretch:(1.8.4.0+dfsg-1) Molecular Graphics System wwwpymol-data
Buster:(2.2.0+dfsg-4) Stretch:(1.8.4.0+dfsg-1) data files for PyMOL wwwpysatellites
Buster:(2.5-1) Stretch:(2.4-2) simulates the launching of satellitespythia8-data
Buster & Stretch:(8.1.86-1.2) PYTHIA8 data files wwwpython-drizzle-testdata
Buster:(1.12-2) Stretch:(1.3-2) Dithered image combination for Python (Test data) wwwpython-expyriment
Buster:(0.7.0+git34-g55a4e7e-3.3) Stretch:(0.7.0+git34-g55a4e7e-3.2) Python library for cognitive and neuroscientific experiments wwwpython-pybigwig
Buster:(0.3.12-1) Stretch:(0.3.2-1) Python 2 module for quick access to bigBed and bigWig files wwwpython-pynlpl
Buster & Stretch:(1.1.2-1) PyNLPl is a library for Natural Language Processing (Python 2 version) wwwpython-pyzolib
Buster & Stretch:(0.3.4-1) Utilities for the Pyzo environment (Python 2) wwwpython3-airr
Buster:(1.2.1-2) Data Representation Standard library for antibody and TCR sequences wwwpython3-amp
Buster:(0.6.1-1) Atomistic Machine-learning Package (python 3) wwwpython3-bcbio
Buster:(1.1.2-3) library for analysing high-throughput sequencing data wwwpython3-fitbitscraper
Buster & Stretch:(0.1-1) Python library for scraping the FitBit website for data wwwpython3-gffutils
Buster:(0.9-1) Work with GFF and GTF files in a flexible database framework wwwpython3-keras
Buster:(2.2.4-1) deep learning framework running on Theano or TensorFlow wwwpython3-morse-simulator
Buster:(1.4-5) Stretch:(1.4-2+b3) Multi-OpenRobot Simulation Engine wwwpython3-pybel
Buster:(0.12.1-1) Biological Expression Language wwwpython3-pybigwig
Buster:(0.3.12-1) Stretch:(0.3.2-1) Python 3 module for quick access to bigBed and bigWig files wwwpython3-pynlpl
Buster & Stretch:(1.1.2-1) PyNLPl is a library for Natural Language Processing (Python 3 version) wwwpython3-pyzolib
Buster & Stretch:(0.3.4-1) Utilities for the Pyzo environment (Python 3) wwwpyzo
Buster:(4.4.3-1.2) Stretch:(4.3.1-1+deb9u1) interactive editor for scientific Python www- Back to top
Q
qcumber
Buster:(1.0.14+dfsg-1) quality control of genomic sequences wwwqfits-tools
Buster & Stretch:(6.2.0-8) FITS manipulation tools wwwqfitsview
Buster:(3.3+p1+dfsg-2+b1) Stretch:(3.3+p1+dfsg-2) FITS file viewer based on DPUSER wwwqgis
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) Geographic Information System (GIS) wwwqgis-api-doc
Buster:(2.18.28+dfsg-2) Stretch:(2.14.11+dfsg-3+deb9u1) QGIS API documentation wwwqgis-common
Buster:(2.18.28+dfsg-2) Stretch:(2.14.11+dfsg-3+deb9u1) QGIS - architecture-independent data wwwqgis-plugin-grass
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) GRASS plugin for QGIS wwwqgis-plugin-grass-common
Buster:(2.18.28+dfsg-2) Stretch:(2.14.11+dfsg-3+deb9u1) GRASS plugin for QGIS - architecture-independent data wwwqgis-provider-grass
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) GRASS provider for QGIS wwwqgis-providers
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) collection of data providers to QGIS wwwqgis-providers-common
Buster:(2.18.28+dfsg-2) Stretch:(2.14.11+dfsg-3+deb9u1) collection of data providers to QGIS - architecture-independent files wwwqgis-server
Buster:(2.18.28+dfsg-2+b1) Stretch:(2.14.11+dfsg-3+deb9u1) QGIS server providing various OGC services wwwqiime
Buster:(1.8.0+dfsg-4+b15) Stretch:(1.8.0+dfsg-4+b3) Quantitative Insights Into Microbial Ecology wwwqiime-data
Buster & Stretch:(1.8.0+dfsg-4) Quantitative Insights Into Microbial Ecology (supporting data) wwwqmc
Buster & Stretch:(0.94-3.1) Quine McClusky Simplification Toolqrisk2
Buster:(0.1.20150729-4) Stretch:(0.1.20150729-2) cardiovascular disease risk calculator wwwqthid-fcd-controller
Buster & Stretch:(4.1-3) Funcube Dongle controller wwwqtltools
Buster:(1.1+dfsg-3) Stretch:(1.1+dfsg-1) Tool set for molecular QTL discovery and analysis wwwquantum-espresso
Buster:(6.3-4) Stretch:(6.0-3) Electronic-Structure and Ab-Initio Molecular Dynamics Suite wwwquantum-espresso-data
Buster:(6.3-4) Stretch:(6.0-3) Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation) wwwquitcount
Buster:(3.1.4-1) Stretch:(3.1.3-3) Small tool which may help yourself quit smoking wwwqutemol
Buster:(0.4.1~cvs20081111-12) Stretch:(0.4.1~cvs20081111-6+rpi1) interactive visualization of macromolecules www- Back to top
R
r-cran-sdmtools
Buster:(1.1-221-1) Species Distribution Modelling Tools wwwr-cran-shazam
Buster:(0.1.11-1) Immunoglobulin Somatic Hypermutation Analysis wwwr-cran-tigger
Buster:(0.3.1-1) Infers new Immunoglobulin alleles from Rep-Seq Data wwwraccoon
Buster & Stretch:(1.0b-2) preparation of in silico drug screening projects wwwradiant
Buster:(2.7+dfsg-2) explore hierarchical metagenomic data with zoomable pie charts wwwrambo-k
Buster:(1.21+dfsg-2) Stretch:(1.21+dfsg-1) Read Assignment Method Based On K-mers wwwrampler
Buster:(1.1.0-1) module for sampling genomic sequences wwwrapmap-dev
Buster:(0.12.0+dfsg-3) rapmap - rapid sensitive and accurate DNA read mapping (some headers) wwwrapmap-example-data
Buster:(0.12.0+dfsg-3) example data for rapmap - rapid sensitive and accurate DNA read mapping wwwrasmol
Buster:(2.7.6.0-1) Stretch:(2.7.5.2-2) visualization of biological macromolecules wwwraster3d
Buster:(3.0-3-5+b7) Stretch:(3.0-3-2+b24) tools for generating images of proteins or other molecules wwwrate4site
Buster:(3.0.0-6) Stretch:(3.0.0-4) detector of conserved amino-acid sites wwwrawtran
Buster:(1.1-1) Stretch:(0.3.8-2+b1) RAW photo to FITS converter wwwray
Buster:(2.3.1-6) Stretch:(2.3.1-4+b1) de novo genome assemblies of next-gen sequencing data wwwray-extra
Buster:(2.3.1-6) Stretch:(2.3.1-4) Scripts and XSL sheets for post-processing for ray wwwrdkit-data
Buster:(201809.1+dfsg-6) Stretch:(201603.5-2) Collection of cheminformatics and machine-learning software (data files) wwwrdp-classifier
Buster:(2.10.2-4) Stretch:(2.10.2-1) extensible sequence classifier for fungal lsu, bacterial and archaeal 16s wwwreadseq
Buster:(1-13) Stretch:(1-11) Conversion between sequence formats wwwreapr
Buster:(1.0.18+dfsg-4) Stretch:(1.0.18+dfsg-3) universal tool for genome assembly evaluation wwwrefmac-dictionary
Buster:(5.41-1) dictionary for macromolecular refinement and model building wwwrepeatmasker-recon
Buster:(1.08-4) Stretch:(1.08-3) finds repeat families from biological sequences wwwreprof
Buster:(1.0.1-6) Stretch:(1.0.1-4) protein secondary structure and accessibility predictor wwwrivet
Buster:(1.8.3-3) Stretch:(1.8.3-2) Robust Independent Validation of Experiment and Theory wwwrivet-plugins
Buster:(1.8.3-3+b1) Analysis plugins of Rivet wwwrivet-plugins-data
Buster:(1.8.3-3) Stretch:(1.8.3-2) Data files of Rivet analysis plugins wwwrivet-plugins-dev
Buster:(1.8.3-3) Stretch:(1.8.3-2) Template generator of Rivet analysis plugin wwwrnahybrid
Buster:(2.1.2-5) Stretch:(2.1.2-1) Fast and effective prediction of microRNA/target duplexes wwwroary
Buster:(3.12.0+dfsg-2) Stretch:(3.8.0+dfsg-1) high speed stand alone pan genome pipeline wwwroguenarok
Buster:(1.0-3) versatile and scalable algorithm for rogue taxon identification wwwrsem
Buster:(1.3.1+dfsg-1) Stretch:(1.2.31+dfsg-1) RNA-Seq by Expectation-Maximization wwwrtax
Buster:(0.984-6) Stretch:(0.984-5) Classification of sequence reads of 16S ribosomal RNA gene wwwruby-rgfa
Buster:(1.3.1+dfsg-1) Stretch:(1.3.1-1) parse, edit and write GFA format graphs in Ruby wwwruncircos-gui
Buster:(0.0+git20180828.97703b9-1+b5) GUI tool to run circos www- Back to top
S
sac2mseed
Buster:(1.12+ds1-3) Convert SAC waveform data to MiniSEED wwwsaga
Buster:(2.3.1+dfsg-4+b1) Stretch:(2.3.1+dfsg-3) System for Automated Geoscientific Analyses wwwsaga-common
Buster:(2.3.1+dfsg-4) Stretch:(2.3.1+dfsg-3) SAGA GIS architecture independent files wwwsaint
Buster:(2.5.0+dfsg-3) Stretch:(2.5.0+dfsg-2) Significance Analysis of INTeractome wwwsalmid
Buster:(0.1.23-1) rapid Kmer based Salmonella identifier from sequence data wwwsamblaster
Buster:(0.1.24-2) marks duplicates, extracts discordant/split reads wwwsamtools
Buster:(1.9-4) Stretch:(1.3.1-3) processing sequence alignments in SAM, BAM and CRAM formats wwwsamtools-test
Buster:(1.9-4) Stretch:(1.3.1-3) test files for the samtools package wwwsaods9
Buster:(8.0.1+repack-2) Stretch:(7.5+repack1-2) Image display tool for astronomy wwwsasview
Buster:(4.2.1-1) Small Angle Scattering Analysis suite wwwsat4j
Buster:(2.3.5-0.3) Stretch:(2.3.5-0.2) Efficient library of SAT solvers in Java wwwsavi
Buster:(1.5.1-3) Stretch:(1.5.0a-1) satellite constellation visualisation wwwsbmltoolbox
Buster:(4.1.0-4) Stretch:(4.1.0-3) libsbml toolbox for octave and matlab wwwscamp
Buster:(2.0.4+dfsg-1+b1) Stretch:(2.0.4-3) Compute astrometric and photometric solutions wwwscience-astronomy
Buster:(1.10) Stretch:(1.7) Debian Science Astronomy transitional package wwwscience-astronomy-dev
Buster:(1.10) Stretch:(1.7) Debian Science Astronomy-dev transitional package wwwscience-biology
Buster:(1.10) Stretch:(1.7) Debian Science Biology packages wwwscience-chemistry
Buster:(1.10) Stretch:(1.7) Debian Science Chemistry packages wwwscience-config
Buster:(1.10) Stretch:(1.7) Debian Science Project config package wwwscience-dataacquisition
Buster:(1.10) Stretch:(1.7) Debian Science data acquisition packages wwwscience-dataacquisition-dev
Buster:(1.10) Stretch:(1.7) Debian Science data acquisition development packages wwwscience-distributedcomputing
Buster:(1.10) Stretch:(1.7) Debian Science Distributed Computing packages wwwscience-economics
Buster:(1.10) Stretch:(1.7) Debian Science Economics packages wwwscience-electronics
Buster:(1.10) Stretch:(1.7) Debian Science Electronics transitional package wwwscience-electrophysiology
Buster:(1.10) Stretch:(1.7) Debian Science packages for Electrophysiology wwwscience-engineering
Buster:(1.10) Stretch:(1.7) Debian Science Engineering packages wwwscience-engineering-dev
Buster:(1.10) Stretch:(1.7) Debian Science Engineering-dev packages wwwscience-financial
Buster:(1.10) Stretch:(1.7) Debian Science financial engineering and computational finance wwwscience-geography
Buster:(1.10) Stretch:(1.7) Debian Science Geography packages wwwscience-geometry
Buster:(1.10) Stretch:(1.7) Debian Science geometry packages wwwscience-highenergy-physics
Buster:(1.10) Stretch:(1.7) Debian Science High Energy Physics packages wwwscience-highenergy-physics-dev
Buster:(1.10) Stretch:(1.7) Debian Science High Energy Physics development packages wwwscience-imageanalysis
Buster:(1.10) Stretch:(1.7) Debian Science image analysis packages wwwscience-linguistics
Buster:(1.10) Stretch:(1.7) Debian Science Linguistics packages wwwscience-logic
Buster:(1.10) Stretch:(1.7) Debian Science Logic packages wwwscience-machine-learning
Buster:(1.10) Stretch:(1.7) Debian Science Machine Learning packages wwwscience-mathematics
Buster:(1.10) Stretch:(1.7) Debian Science Mathematics packages wwwscience-mathematics-dev
Buster:(1.10) Stretch:(1.7) Debian Science Mathematics-dev packages wwwscience-meteorology
Buster:(1.10) Stretch:(1.7) Debian Science Meteorology packages wwwscience-meteorology-dev
Buster:(1.10) Stretch:(1.7) Debian Science Meteorology-dev packages wwwscience-nanoscale-physics
Buster:(1.10) Stretch:(1.7) Debian Science Nanoscale Physics packages wwwscience-nanoscale-physics-dev
Buster:(1.10) Stretch:(1.7) Debian Science Nanoscale Physics development packages wwwscience-neuroscience-cognitive
Buster:(1.10) Stretch:(1.7) Debian Science packages for Cognitive Neuroscience wwwscience-neuroscience-modeling
Buster:(1.10) Stretch:(1.7) Debian Science packages for modeling of neural systems wwwscience-numericalcomputation
Buster:(1.10) Stretch:(1.7) Debian Science Numerical Computation packages wwwscience-physics
Buster:(1.10) Stretch:(1.7) Debian Science Physics packages wwwscience-physics-dev
Buster:(1.10) Stretch:(1.7) Debian Science Physics-dev packages wwwscience-presentation
Buster:(1.10) Stretch:(1.7) Debian Science generic tools for presentations wwwscience-psychophysics
Buster:(1.10) Stretch:(1.7) Debian Science packages for Psychophysics wwwscience-robotics
Buster:(1.10) Stretch:(1.7) Debian Robotics packages wwwscience-robotics-dev
Buster:(1.10) Stretch:(1.7) Debian Robotics development packages wwwscience-simulations
Buster:(1.10) Stretch:(1.7) Debian Science Simulation packages wwwscience-statistics
Buster:(1.10) Stretch:(1.7) Debian Science Statistics packages wwwscience-tasks
Buster:(1.10) Stretch:(1.7) Debian Science tasks for tasksel wwwscience-typesetting
Buster:(1.10) Stretch:(1.7) Debian Science typesetting packages wwwscience-viewing
Buster:(1.10) Stretch:(1.7) Debian Science data visualisation packages wwwscience-viewing-dev
Buster:(1.10) Stretch:(1.7) Debian Science development of visualisation applications wwwscoary
Buster:(1.6.16-1) pangenome-wide association studies wwwscram
Buster:(0.16.2-1) Stretch:(0.11.5-1) Probabilistic Risk Analysis Tool wwwscram-gui
Buster:(0.16.2-1) SCRAM GUI front-end wwwscrm
Buster:(1.7.3-1) Stretch:(1.7.2-1) simulator of evolution of genetic sequences wwwsctk
Buster & Stretch:(2.4.10-20151007-1312Z+dfsg2-3) speech recognition scoring toolkit wwwscythe
Buster:(0.994+git20141017.20d3cff-1) Stretch:(0.994-4) Bayesian adaptor trimmer for sequencing reads wwwsdaps
Buster:(1.2.1-2) scripts for data acquisition with paper-based surveys wwwseaview
Buster:(1:4.7-1) Stretch:(1:4.6.1.2-2) Multiplatform interface for sequence alignment and phylogeny wwwseer
Buster:(1.1.4-2+b1) Stretch:(1.1.2-3) genomic sequence element (kmer) enrichment analysis wwwseesat5
Buster & Stretch:(0.90.10-1.1) a satellite location programsegemehl
Buster:(0.3.4-1) short read mapping with gaps wwwsegyio-bin
Buster:(1.8.3-1) SEG-Y read/write library for seismic processing (shell utilities) wwwseqan-apps
Buster:(2.4.0+dfsg-11) C++ library for the analysis of biological sequences wwwseqmagick
Buster:(0.7.0-1) imagemagick-like frontend to Biopython SeqIO wwwseqprep
Buster:(1.3.2-3) Stretch:(1.3.2-1) stripping adaptors and/or merging paired reads of DNA sequences with overlap wwwseqprep-data
Buster:(1.3.2-3) Stretch:(1.3.2-1) example data set for seqprep - only used for testing wwwseqsero
Buster:(1.0.1+dfsg-1) Salmonella serotyping from genome sequencing data wwwseqtk
Buster:(1.3-1) Stretch:(1.2-1) Fast and lightweight tool for processing sequences in the FASTA or FASTQ format wwwsextractor
Buster:(2.19.5+dfsg-6) Stretch:(2.19.5+dfsg-4) Source extractor for astronomical images wwwsga
Buster:(0.10.15-4) Stretch:(0.10.15-2) de novo genome assembler that uses string graphs wwwshelxle
Buster & Stretch:(1.0.816-1) graphical user interface for SHELXL wwwshogun-cmdline-static
Buster:(3.2.0-8+b1) Stretch:(3.2.0-7.5~rpistretch) Large Scale Machine Learning Toolbox wwwsibsim4
Buster:(0.20-4) Stretch:(0.20-2) align expressed RNA sequences on a DNA template wwwsickle
Buster:(1.33+git20150314.f3d6ae3-1) Stretch:(1.33-1) windowed adaptive trimming tool for FASTQ files using quality wwwsigma-align
Buster:(1.1.3-6) Stretch:(1.1.3-4) Simple greedy multiple alignment of non-coding DNA sequences wwwsigviewer
Buster:(0.6.2-2) Stretch:(0.5.1+svn556-5) GUI viewer for biosignals such as EEG, EMG, and ECG wwwsilx
Buster:(0.9.0+dfsg-3) Toolbox for X-Ray data analysis - Executables wwwsim4
Buster:(0.0.20121010-5) Stretch:(0.0.20121010-4) tool for aligning cDNA and genomic DNA wwwsim4db
Buster:(0~20150903+r2013-6+b3) Stretch:(0~20150903+r2013-3+b2) batch spliced alignment of cDNA sequences to a target genome wwwsimgrid-java
Buster:(3.21+dfsg-4+b1) Stretch:(3.14.159-2) Java bindings for the SimGrid Toolkit wwwsiril
Buster:(0.9.10-2) Stretch:(0.9.5-2) astronomical image processing tool wwwsixpack
Buster & Stretch:(1:0.68-1) full-featured package for XAS analysis wwwskycat
Buster:(3.1.2+starlink1~b+dfsg-5+b1) Stretch:(3.1.2+starlink1~b+dfsg-2+b3) Image visualization and access to catalogs and data for astronomy wwwslang-xfig
Buster:(0.2.0~.117-2) Stretch:(0.2.0~.35-2) produce plots and drawings through Xfig's fig2dev in S-Lang wwwsleepyhead
Buster:(1.0.0-beta-2+dfsg-6) Stretch:(1.0.0-beta-2+dfsg-2) Sleep tracking software with a focus on monitoring CPAP treatment wwwsmalr
Buster:(1.1+dfsg-2) interrogation of the methylation status of nucleotide sequencing reads wwwsmalt
Buster:(0.7.6-8) Stretch:(0.7.6-6) Sequence Mapping and Alignment Tool wwwsmalt-examples
Buster:(0.7.6-8) Stretch:(0.7.6-6) Sequence Mapping and Alignment Tool (examples) wwwsmithwaterman
Buster:(0.0+git20160702.2610e25-7) Stretch:(0.0+20160702-1) determine similar regions between two strings or genomic sequences wwwsmrtanalysis
Buster & Stretch:(0~20161126) software suite for single molecule, real-time sequencing wwwsnakemake
Buster:(5.4.0-1) Stretch:(3.10.0-1) pythonic workflow management system wwwsnap
Buster:(2013-11-29-9) Stretch:(2013-11-29-6) location of genes from DNA sequence with hidden markov model wwwsniffles
Buster:(1.0.11+ds-1) Stretch:(1.0.2+ds-1) structural variation caller using third-generation sequencing wwwsnp-sites
Buster:(2.4.1-1) Stretch:(2.3.2-1) Binary code for the package snp-sites wwwsnpomatic
Buster:(1.0-4) Stretch:(1.0-3) fast, stringent short-read mapping software wwwsoapsnp
Buster:(1.03-3) resequencing utility that can assemble consensus sequence of genomes wwwsolvate-doc
Buster:(1.0-2) Documentation for solvate wwwspaced
Buster:(1.2.0-201605+dfsg-1) Stretch:(1.0.2+dfsg-1) alignment-free sequence comparison using spaced words wwwspass
Buster & Stretch:(3.7-4) automated theorem prover for first-order logic with equality wwwspatialite-bin
Buster:(4.3.0-2+b3) Stretch:(4.3.0-2+b2) Geospatial extension for SQLite - tools wwwspd
Buster & Stretch:(1.3.0-1) Synchrotron image corrections and azimuthal integration wwwsplash
Buster:(2.8.0-1) Stretch:(2.6.0-2) Visualisation tool for Smoothed Particle Hydrodynamics simulation wwwsprai
Buster:(0.9.9.23+dfsg-2) Stretch:(0.9.9.22+dfsg-1) single-pass sequencing read accuracy improver wwwspread-phy
Buster:(1.0.7+dfsg-2) Stretch:(1.0.7+dfsg-1) analyze and visualize phylogeographic reconstructions wwwsquizz
Buster:(0.99d+dfsg-2) Stretch:(0.99c+dfsg-1) Converter for genetic sequences and alignments wwwssake
Buster:(4.0-2) Stretch:(3.8.4-1) genomics application for assembling millions of very short DNA sequences wwwssake-examples
Buster:(4.0-2) Stretch:(3.8.4-1) example data for SSAKE, a genomic assembler of short reads wwwsspace
Buster:(2.1.1+dfsg-4) Stretch:(2.1.1+dfsg-2) scaffolding pre-assembled contigs after extension wwwstacks
Buster:(2.2+dfsg-1+b1) Stretch:(1.44-2) pipeline for building loci from short-read DNA sequences wwwstacks-web
Buster:(2.2+dfsg-1) Stretch:(1.44-2) web interface for displaying loci from short-read sequences wwwstaden
Buster:(2.0.0+b11-4) Stretch:(2.0.0+b11-2) DNA sequence assembly (Gap4/Gap5), editing and analysis tools wwwstaden-common
Buster:(2.0.0+b11-4) Stretch:(2.0.0+b11-2) Architecture independent files for Staden wwwstaden-io-lib-examples
Buster:(1.14.11-6) Stretch:(1.14.8-2) programs for manipulating DNA sequencing files (usage examples) wwwstaden-io-lib-utils
Buster:(1.14.11-6) Stretch:(1.14.8-2) programs for manipulating DNA sequencing files wwwstardata-common
Buster & Stretch:(0.8) Common framework to manage astronomy packages wwwstarplot
Buster:(0.95.5-8.3) Stretch:(0.95.5-8.2+deb9u1) 3-dimensional perspective star map viewer wwwstarpu-examples
Buster:(1.2.6+dfsg-7) Stretch:(1.2.0+dfsg-4) Task scheduler for heterogeneous multicore machines - exs wwwstellarium
Buster:(0.18.3-1) Stretch:(0.15.0-1) real-time photo-realistic sky generator wwwstellarium-data
Buster:(0.18.3-1) Stretch:(0.15.0-1) Stellarium data files wwwstep
Buster:(4:18.08.1-1+b1) Stretch:(4:16.08.0-1) interactive physical simulator for KDE wwwstiff
Buster:(2.4.0-3) Stretch:(2.4.0-2) convert scientific FITS images to the TIFF format wwwstilts
Buster:(3.1.5-1) Starlink Tables Infrastructure Library Tool Set wwwstimfit
Buster:(0.15.8-1+b1) Stretch:(0.15.3-1+rpi1) Program for viewing and analyzing electrophysiological data wwwsubread
Buster:(1.6.3+dfsg-1) Stretch:(1.5.1+dfsg-4) toolkit for processing next-gen sequencing data wwwsubread-data
Buster:(1.6.3+dfsg-1) Stretch:(1.5.1+dfsg-4) data files for subread package wwwsuitename
Buster:(0.3.070628-2) Stretch:(0.3.070628-1) categorize each suite in an RNA backbone wwwsumaclust
Buster:(1.0.31-2) Stretch:(1.0.20-1) fast and exact clustering of genomic sequences wwwsumatra
Buster:(1.0.31-2) Stretch:(1.0.20-1) fast and exact comparison and clustering of sequences wwwsumo
Buster:(1.1.0+dfsg1-1) Stretch:(0.28.0+dfsg1-1) Simulation of Urban MObility (SUMO) wwwsurankco
Buster:(0.0.r5+dfsg-2) Stretch:(0.0.r5+dfsg-1) Supervised Ranking of Contigs in de novo Assemblies wwwsurvex
Buster:(1.2.38-1) Stretch:(1.2.30-1) cave surveying and mapping software wwwsurvex-aven
Buster:(1.2.38-1) Stretch:(1.2.30-1) sophisticated cave survey viewer for Survex wwwswarp
Buster:(2.38.0+dfsg-4) Stretch:(2.38.0+dfsg-3) Resample and co-add together FITS images wwwswe-basic-data
Buster & Stretch:(1.80.00.0002-1) basic data files for the libswe package wwwswe-standard-data
Buster & Stretch:(00004-1) standard data for the Swiss Ephemeris wwwsweed
Buster:(3.2.1+dfsg-1) assessment of SNPs for their evolutionary advantage wwwsyrthes
Buster:(4.3.0-dfsg1-3) Stretch:(4.3.0-dfsg1-2) Transient thermal simulations in complex solid geometries wwwsyrthes-gui
Buster:(4.3.0-dfsg1-3) Stretch:(4.3.0-dfsg1-2) Transient thermal simulations in complex solid geometries - GUI wwwsyrthes-tests
Buster:(4.3.0-dfsg1-3) Stretch:(4.3.0-dfsg1-2) Test cases for SYRTHES wwwsyrthes-tools
Buster:(4.3.0-dfsg1-3) Stretch:(4.3.0-dfsg1-2) Transient thermal simulations in complex solid geometries - tools www- Back to top
T
t-coffee
Buster:(12.00.7fb08c2-4) Stretch:(11.00.8cbe486-5) Multiple Sequence Alignment wwwt-coffee-examples
Buster:(12.00.7fb08c2-4) Stretch:(11.00.8cbe486-5) annotated examples for the use of T-Coffee wwwtabix
Buster:(1.9-11) Stretch:(1.3.2-2+rpi1) generic indexer for TAB-delimited genome position files wwwtandem-mass
Buster:(1:201702011-1) Stretch:(1:20151215-4) mass spectrometry software for protein identification wwwtantan
Buster:(22-1) Stretch:(13-4) low complexity and tandem repeat masker for biosequences wwwtcd-utils
Buster & Stretch:(20061127-2) convert Tide Constituent Database (TCD) filestcliis
Buster:(8.0.1+repack-2) Tcl IIS protocol package wwwteem-apps
Buster:(1.12.0~20160122-2) Stretch:(1.11.0~svn6057-1.1) Tools to process and visualize scientific data and images - command line tools wwwterraintool
Buster:(1.13-2) Stretch:(1.12a-1) Generates survex format terrain models from SRTM and ASTER data wwwtherion
Buster:(5.4.3ds1-6) Stretch:(5.3.16-10+b2) Cave surveying - 2D and 3D drawing software wwwtherion-viewer
Buster:(5.4.3ds1-6) Stretch:(5.3.16-10+b2) Cave surveying - 3D viewer for therion models wwwtheseus
Buster:(3.3.0-8) Stretch:(3.3.0-5) superimpose macromolecules using maximum likelihood wwwtheseus-examples
Buster:(3.3.0-8) Stretch:(3.3.0-5) superimpose macromolecules using maximum likelihood (examples) wwwtigr-glimmer
Buster:(3.02b-2) Stretch:(3.02b-1) Gene detection in archea and bacteria wwwtimbl
Buster:(6.4.13-1) Stretch:(6.4.8-1) Tilburg Memory Based Learner wwwtimblserver
Buster:(1.12-1) Stretch:(1.11-1) Server extensions for Timbl wwwtksao
Buster:(8.0.1+repack-2) Stretch:(7.5+repack1-2) Tk widgets for astronomical imaging and data visualization wwwtm-align
Buster:(20170708+dfsg-2) Stretch:(20160521+dfsg-2) structural alignment of proteins wwwtnseq-transit
Buster:(2.3.4-1) statistical calculations of essentiality of genes or genomic regions wwwtopcat
Buster:(4.6.2-1) Tool for OPerations on Catalogues And Tables wwwtophat
Buster:(2.1.1+dfsg1-2) fast splice junction mapper for RNA-Seq reads wwwtoppred
Buster:(1.10-7) Stretch:(1.10-4) transmembrane topology prediction wwwtoulbar2
Buster:(1.0.0+dfsg3-2) Stretch:(0.9.8-1) Exact combinatorial optimization for Graphical Models wwwtoulbar2-doc
Buster:(1.0.0+dfsg3-2) Exact combinatorial optimization for Graphical Models - documentation wwwtrace2dbest
Buster:(3.0.1-1) bulk submission of chromatogram data to dbEST wwwtrace2dbest-doc
Buster:(3.0.1-1) Documentation and sample files for trace2dbest wwwtracetuner
Buster:(3.0.6~beta+dfsg-1) interpretation of DNA Sanger sequencing data wwwtranscalc
Buster & Stretch:(0.14-6) microwave and RF transmission line calculator wwwtransdecoder
Buster:(5.0.1-2) Stretch:(3.0.1+dfsg-1) find coding regions within RNA transcript sequences wwwtransrate-tools
Buster:(1.0.0-2) Stretch:(1.0.0-1) helper for transrate wwwtranstermhp
Buster:(2.09-4) Stretch:(2.09-3) find rho-independent transcription terminators in bacterial genomes wwwtravis
Buster:(190101-1) Stretch:(161013-1) trajectory analyzer and visualizer wwwtree-ppuzzle
Buster:(5.2-11) Stretch:(5.2-8+b2) Parallelized reconstruction of phylogenetic trees by maximum likelihood wwwtree-puzzle
Buster:(5.2-11) Stretch:(5.2-8+b2) Reconstruction of phylogenetic trees by maximum likelihood wwwtreeview
Buster:(1.1.6.4+dfsg1-4) Stretch:(1.1.6.4+dfsg1-2) Java re-implementation of Michael Eisen's TreeView wwwtreeviewx
Buster:(0.5.1+git20100823.7e4d0e9-1) Stretch:(0.5.1+20100823-4) Displays and prints phylogenetic trees wwwtrimmomatic
Buster:(0.38+dfsg-1) Stretch:(0.36+dfsg-1) flexible read trimming tool for Illumina NGS data wwwtrinityrnaseq-examples
Buster:(2.6.6+dfsg-6) Stretch:(2.2.0+dfsg-2) RNA-Seq De novo Assembly common example and testing files wwwtrnascan-se-common
Buster:(2.0.0-3) detection of transfer RNA genes in genomic sequence (common files) wwwtunnelx
Buster:(20170928-2) Stretch:(20160713-3) Cave Survey drawing software wwwtvc
Buster:(5.0.3+git20151221.80e144e+dfsg-2) genetic variant caller for Ion Torrent sequencing platforms wwwtwms
Buster:(0.07z-1) Stretch:(0.05t-4) tiny web map service www- Back to top
U
ubertooth
Buster:(2018.12.R1-2) Stretch:(2015.09.R2-4) 2.4 GHz wireless development platform for Bluetooth experimentation wwwubertooth-firmware
Buster:(2018.12.R1-2) Stretch:(2015.09.R2-4) Firmware for Ubertooth wwwubertooth-firmware-source
Buster:(2018.12.R1-2) Stretch:(2015.09.R2-4) Source code for the Ubertooth firmware wwwuc-echo
Buster:(1.12-11) Stretch:(1.12-9) error correction algorithm designed for short-reads from NGS wwwucto
Buster:(0.14-2) Stretch:(0.9.6-1) Unicode Tokenizer wwwuctodata
Buster:(0.8-2) Stretch:(0.4-1) Data files for Ucto wwwugene-data
Buster:(1.31.1+dfsg-1) Stretch:(1.25.0+dfsg-1) required data for UGENE - integrated bioinformatics toolkit wwwuhd-host
Buster:(3.13.1.0-3) Stretch:(3.9.5-2) universal hardware driver for Ettus Research products - host apps wwwunicycler-data
Buster:(0.4.7+dfsg-2) hybrid assembly pipeline for bacterial genomes (data package) wwwunits-filter
Buster:(3.9-1) Stretch:(3.7-3) Parser for expressions concerning physical valuesurg-utils
Buster & Stretch:(0.8.18-2) utilities for Hokuyo URG/UTM laser range scanners- Back to top
V
v-sim
Buster:(3.7.2-6) Stretch:(3.7.2-2) Visualize atomic structures wwwv-sim-common
Buster:(3.7.2-6) Stretch:(3.7.2-2) Visualize atomic structures (support files) wwwv-sim-plugins
Buster:(3.7.2-6) Stretch:(3.7.2-2) Plugins for V_Sim (a 3D visualization package) wwwvarna
Buster:(3-93+ds-2) Stretch:(3-93+ds-1) Visualization Applet for RNA wwwvcftools
Buster:(0.1.16-1) Stretch:(0.1.14+dfsg-4+deb9u1) Collection of tools to work with VCF files wwwvelvet
Buster:(1.2.10+dfsg1-5) Stretch:(1.2.10+dfsg1-3) Nucleic acid sequence assembler for very short reads wwwvelvet-example
Buster:(1.2.10+dfsg1-5) Stretch:(1.2.10+dfsg1-3) Example data for the Velvet sequence assembler wwwvelvet-long
Buster:(1.2.10+dfsg1-5) Stretch:(1.2.10+dfsg1-3) Nucleic acid sequence assembler for very short reads, long version wwwvelvet-tests
Buster:(1.2.10+dfsg1-5) Stretch:(1.2.10+dfsg1-3) Test data for the Velvet sequence assembler wwwvelvetoptimiser
Buster:(2.2.6-2) Stretch:(2.2.5-5) automatically optimise Velvet do novo assembly parameters wwwviewmol
Buster:(2.4.1-25) Stretch:(2.4.1-24) graphical front end for computational chemistry programs wwwvisp-images-data
Buster:(3.2.0-1) Stretch:(3.0.0-2) visual servoing library - dataset reference files wwwvistrails
Buster & Stretch:(2.2.4-1) Science visualisation workflow toolkit wwwvmtk
Buster:(1.3+dfsg-2.3) Stretch:(1.3+dfsg-2.1+deb9u1) the Vascular Modeling Toolkit wwwvoro++
Buster:(0.4.6+dfsg1-3) library for the computation of the Voronoi diagram wwwvoro++-examples
Buster:(0.4.6+dfsg1-3) library for the computation of the Voronoi diagram (examples) wwwvoronota
Buster:(1.19.2352-1) Voronoi diagram-based tool to find atom contacts wwwvotca-csg
Buster:(1.5-3) Stretch:(1.3.0-3+b1) VOTCA's coarse-graining engine wwwvotca-csg-scripts
Buster:(1.5-3) Stretch:(1.3.0-3) VOTCA's coarse-graining scripts wwwvotca-csg-tutorials
Buster:(1.5-3) Stretch:(1.3.0-3) VOTCA's coarse-graining tutorials wwwvowpal-wabbit
Buster & Stretch:(7.3-1.1+b1) fast and scalable online machine learning algorithm wwwvoxbo
Buster:(1.8.5~svn1246-3) Stretch:(1.8.5~svn1246-2) processing, statistical analysis, and display of brain imaging data www- Back to top
W
wcslib-tools
Buster:(6.2-2) Stretch:(5.16-1) Command line tools utilizing wcslib wwwwcstools
Buster:(3.9.5-3) Stretch:(3.9.4-2) Handle the WCS of a FITS image wwwweightwatcher
Buster:(1.12+dfsg-1) Stretch:(1.12-1) Combine maps and polygon data for astronomical image processing wwwweka
Buster & Stretch:(3.6.14-1) Machine learning algorithms for data mining tasks wwwwfrog
Buster & Stretch:(0.8.2+svn973-1) Web-based customizable weather station software wwwwigeon
Buster:(20101212+dfsg1-2) Stretch:(20101212+dfsg1-1) reimplementation of the Pintail 16S DNA anomaly detection utility wwwwise
Buster:(2.4.1-21) Stretch:(2.4.1-19) comparison of biopolymers, like DNA and protein sequences wwwworldwind
Buster & Stretch:(0.5.0-10) 3D Virtual Globe wwwwsclean
Buster:(2.6-1+b3) Stretch:(2.2.1-1) Fast generic widefield interferometric imager wwwwxastrocapture
Buster:(1.8.1+git20140821+dfsg-2) Stretch:(1.8.1+git20140821+dfsg-1+b1) Windows linuX Astronomy Capture www- Back to top
X
xbs
Buster & Stretch:(0-10) 3-d models and movies of moleculesxcas
Buster:(1.4.9.69+dfsg1-2) Computer Algebra System - console and graphical calculator wwwxdrawchem
Buster:(1:1.10.2.1-2) Stretch:(2.0-6) Chemical structures and reactions editorxflr5
Buster & Stretch:(6.09.06-2+b1) analysis tool for airfoils wwwxfoil
Buster:(6.99.dfsg+1-1) Stretch:(6.99.dfsg-2) program for the design and analysis of subsonic airfoils wwwxmakemol
Buster & Stretch:(5.16-9) program for visualizing atomic and molecular systems wwwxmakemol-gl
Buster & Stretch:(5.16-9) program for visualizing atomic and molecular systems (OpenGL) wwwxmds
Buster & Stretch:(1.6.6-7) eXtensible Multi-Dimensional Simulator wwwxmds2
Buster:(2.2.3+dfsg-15) Stretch:(2.2.2+dfsg-3) eXtensible Multi-Dimensional Simulator wwwxpa-tools
Buster:(2.1.18-4+rpi1) Stretch:(2.1.18-1) Tools for seamless communication between Unix programs wwwxplot
Buster & Stretch:(1.19-9) simple on-screen x-y column data plotterxplot-xplot.org
Buster:(0.90.7.1-4) Stretch:(0.90.7.1-3) fast tool to graph and visualize lots of data wwwxppaut
Buster & Stretch:(6.11b+1.dfsg-1) Phase Plane Plus Auto: Solves many kinds of equations wwwxtide
Buster & Stretch:(2.13.2-1+b1) provides tide and current predictions wwwxtide-coastline
Buster & Stretch:(20020202-1) coastline data for xtidextide-data
Buster & Stretch:(20100529-1) Harmonics data for xtide wwwxtide-data-nonfree
Buster & Stretch:(20100529-1) Harmonics data for xtide (Canada, Netherlands, Germany and UK) wwwxyscan
Buster:(4.30-2+b2) Stretch:(3.33-1) data thief for scientists www- Back to top
Y
yagv
Buster:(0.4~20130422.r5bd15ed+dfsg-4) Stretch:(0.4~20130422.r5bd15ed+dfsg-1) yet another G-code viewer wwwyaha
Buster:(0.1.83-1) find split-read mappings on single-end queries wwwyale
Buster & Stretch:(5.0.95-2) stellar data set from the Yale Bright Star Catalog wwwyorick
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6+b3) interpreted language and scientific graphics wwwyorick-av
Buster:(0.0.5-1+b1) Stretch:(0.0.4-2~deb9u1) write movies from Yorick in various formats wwwyorick-cubeview
Buster & Stretch:(2.2-2) 3D FITS data viewer specialized in spectro-imaging wwwyorick-curses
Buster & Stretch:(0.1-6) interface to the (n)curses library for the Yorick languageyorick-data
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6) interpreted library for the Yorick language wwwyorick-dev
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6+b3) development files for the Yorick interpreted language wwwyorick-gl
Buster & Stretch:(1.1+cvs20070922+dfsg-6.1) OpenGL 3D graphics support for the Yorick language wwwyorick-gy
Buster & Stretch:(0.0.5-1) GObject introspection and Gtk bindings for Yorick wwwyorick-gyoto
Buster:(1.3.1-1) Stretch:(1.2.0-2) General relativistic geodesic integration for the Yorick language wwwyorick-hdf5
Buster:(0.8.0-8+b1) Stretch:(0.8.0-8) Hierarchical Data Format 5 interface for the Yorick languageyorick-imutil
Buster & Stretch:(0.5.7-3) fast image manipulation routines for the Yorick languageyorick-mira
Buster & Stretch:(1.1.0+git20170124.3bd1c3~dfsg1-2) optical interferometry image reconstruction within Yorick wwwyorick-ml4
Buster & Stretch:(0.6.0-3) Matlab file format support for the Yorick languageyorick-mpeg
Buster & Stretch:(0.1-3) MPEG output support for the Yorick language wwwyorick-mpy-common
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6) Message Passing Yorick (common files) wwwyorick-mpy-mpich2
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6+b3) Message Passing Yorick (MPICH2 build) wwwyorick-mpy-openmpi
Buster:(2.2.04+dfsg1-10) Stretch:(2.2.04+dfsg1-6+b3) Message Passing Yorick (OpenMPI build) wwwyorick-optimpack
Buster & Stretch:(1.3.2+dfsg+1.4.0-1) optimization of large scale problems for the Yorick language wwwyorick-soy
Buster & Stretch:(1.4.0-3) sparse matrix operations for the Yorick language wwwyorick-spydr
Buster & Stretch:(0.8.2-3) FITS image display and simple analysis wwwyorick-svipc
Buster:(0.16-3) Stretch:(0.16-2+b1) interprocess communication (shared memory...) for Yorick wwwyorick-yao
Buster:(5.4.0-1+b16) Stretch:(5.4.0-1+b1) Yorick-based adaptive optics system simulator wwwyorick-yeti
Buster & Stretch:(6.4.0-1) utility plugin for the Yorick language wwwyorick-yeti-fftw
Buster & Stretch:(6.4.0-1) FFT plugin for the Yorick language wwwyorick-yeti-regex
Buster & Stretch:(6.4.0-1) POSIX regular expressions for the Yorick language wwwyorick-yeti-tiff
Buster & Stretch:(6.4.0-1) TIFF image format input for the Yorick language wwwyorick-ygsl
Buster:(1.2.1-1+b2) Stretch:(1.2.1-1) GSL special functions plugin for the Yorick language wwwyorick-ynfft
Buster & Stretch:(1.0.3-1) nonequispaced fast Fourier transform for Yorick wwwyorick-yutils
Buster & Stretch:(1.5.2-1) various utilities for the Yorick languageyorick-z
Buster & Stretch:(1.2.0+cvs20080115-5) zlib, jpeg and png support for the Yorick language www- Back to top
Z
z3
Buster:(4.4.1-1~deb10u1) Stretch:(4.4.1-1~deb9u1) theorem prover from Microsoft Research wwwz88
Buster:(13.0.0+dfsg2-6) Stretch:(13.0.0+dfsg2-4) Finite Element Analysis Program - runtime wwwz88-data
Buster:(13.0.0+dfsg2-6) Stretch:(13.0.0+dfsg2-4) Finite Element Analysis Program - data wwwzalign
Buster:(0.9.1-4) Stretch:(0.9.1-2+b2) parallel local alignment of biological sequences wwwzegrapher
Buster:(3.0.2-1) Stretch:(3.0-2) plotting mathematical functions and sequences on the plane wwwzimpl
Buster:(3.3.6-1) Stretch:(3.3.2-1) mathematical modeling language for optimization problems wwwztex-bmp
Buster & Stretch:(20120314-2) universal macro processor www